Wall clock time and date at job start Mon Mar 8 2021 05:14:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35898 * 116.99689 * 2 1 4 4 C 1.38614 * 120.02525 * 180.02562 * 3 2 1 5 5 C 1.38654 * 119.89169 * 179.70354 * 4 3 2 6 6 O 1.35895 * 120.03411 * 180.27382 * 5 4 3 7 7 C 1.42903 * 116.99238 * 0.25135 * 6 5 4 8 8 C 1.50711 * 109.46772 * 180.02562 * 7 6 5 9 9 O 1.21277 * 119.99699 * 359.97438 * 8 7 6 10 10 N 1.34775 * 120.00101 * 180.02562 * 8 7 6 11 11 C 1.46493 * 120.00286 * 180.02562 * 10 8 7 12 12 H 1.09001 * 112.84838 * 23.80112 * 11 10 8 13 13 C 1.53777 * 113.61640 * 154.99709 * 11 10 8 14 14 C 1.53788 * 87.08038 * 89.11704 * 13 11 10 15 15 H 1.08997 * 113.61509 * 270.88339 * 14 13 11 16 16 C 1.50703 * 113.61177 * 139.97949 * 14 13 11 17 17 C 1.38228 * 120.00112 * 299.72292 * 16 14 13 18 18 C 1.38238 * 119.99780 * 179.76380 * 17 16 14 19 19 C 1.38235 * 119.99976 * 0.49599 * 18 17 16 20 20 C 1.50703 * 120.00157 * 179.76419 * 19 18 17 21 21 F 1.39902 * 109.47039 * 270.02148 * 20 19 18 22 22 F 1.39895 * 109.46976 * 30.01609 * 20 19 18 23 23 F 1.39901 * 109.47008 * 150.01737 * 20 19 18 24 24 C 1.38236 * 119.99799 * 359.78405 * 19 18 17 25 25 C 1.38231 * 120.00213 * 359.95712 * 24 19 18 26 26 C 1.53782 * 87.08089 * 25.43330 * 14 13 11 27 27 C 1.38756 * 119.94324 * 0.52766 * 5 4 3 28 28 C 1.50702 * 119.97433 * 179.75087 * 27 5 4 29 29 O 1.42892 * 109.47242 * 74.72329 * 28 27 5 30 30 Si 1.86298 * 109.46915 * 194.72868 * 28 27 5 31 31 C 1.38196 * 120.05308 * 359.47201 * 27 5 4 32 32 C 1.38153 * 120.11262 * 0.27680 * 31 27 5 33 33 H 1.09007 * 109.47270 * 299.99677 * 1 2 3 34 34 H 1.08998 * 109.47318 * 59.99919 * 1 2 3 35 35 H 1.09006 * 109.47004 * 180.02562 * 1 2 3 36 36 H 1.08000 * 120.05750 * 0.02562 * 4 3 2 37 37 H 1.08996 * 109.47519 * 299.99935 * 7 6 5 38 38 H 1.09003 * 109.47243 * 60.00763 * 7 6 5 39 39 H 0.97002 * 119.99672 * 0.02562 * 10 8 7 40 40 H 1.09000 * 113.61420 * 203.66010 * 13 11 10 41 41 H 1.08999 * 113.61738 * 334.48613 * 13 11 10 42 42 H 1.07998 * 120.00264 * 0.02562 * 17 16 14 43 43 H 1.08002 * 120.00136 * 180.25221 * 18 17 16 44 44 H 1.08002 * 119.99603 * 179.97438 * 24 19 18 45 45 H 1.08004 * 120.00038 * 180.02562 * 25 24 19 46 46 H 1.08993 * 113.61627 * 220.01765 * 26 14 13 47 47 H 1.08997 * 113.61741 * 89.11417 * 26 14 13 48 48 H 1.09000 * 109.46724 * 314.72375 * 28 27 5 49 49 H 0.96703 * 114.00176 * 180.02562 * 29 28 27 50 50 H 1.48506 * 109.99834 * 178.68053 * 30 28 27 51 51 H 1.48502 * 110.00011 * 299.99318 * 30 28 27 52 52 H 1.08005 * 119.94645 * 180.29747 * 31 27 5 53 53 H 1.08005 * 119.97885 * 179.97438 * 32 31 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 -0.0005 5 6 4.0566 2.5210 -0.0068 6 8 5.4135 2.5962 -0.0129 7 6 6.1315 1.3606 -0.0182 8 6 7.6124 1.6403 -0.0240 9 8 8.0133 2.7849 -0.0241 10 7 8.4912 0.6185 -0.0301 11 6 9.9306 0.8903 -0.0351 12 1 10.1776 1.8709 0.3718 13 6 10.7753 -0.2517 0.5542 14 6 10.8274 -0.8403 -0.8657 15 1 10.0016 -1.5157 -1.0890 16 6 12.1713 -1.4159 -1.2315 17 6 13.2917 -0.6063 -1.2368 18 6 14.5252 -1.1354 -1.5677 19 6 14.6365 -2.4718 -1.9032 20 6 15.9804 -3.0474 -2.2690 21 9 16.1802 -2.9253 -3.6483 22 9 16.9861 -2.3525 -1.5889 23 9 16.0223 -4.3988 -1.9095 24 6 13.5151 -3.2800 -1.9035 25 6 12.2825 -2.7522 -1.5675 26 6 10.6092 0.5916 -1.3825 27 6 3.2970 3.6822 -0.0014 28 6 3.9773 5.0269 -0.0024 29 8 4.5029 5.2938 -1.3041 30 14 2.7439 6.3471 0.4520 31 6 1.9171 3.6065 -0.0008 32 6 1.2905 2.3753 0.0001 33 1 -0.3634 0.5138 0.8901 34 1 -0.3634 0.5138 -0.8899 35 1 -0.3633 -1.0277 0.0005 36 1 4.0196 0.3792 -0.0014 37 1 5.8739 0.7869 0.8720 38 1 5.8657 0.7897 -0.9079 39 1 8.1704 -0.2970 -0.0311 40 1 11.7465 0.0718 0.9285 41 1 10.2328 -0.8735 1.2663 42 1 13.2041 0.4387 -0.9784 43 1 15.4013 -0.5038 -1.5678 44 1 13.6021 -4.3241 -2.1660 45 1 11.4064 -3.3838 -1.5673 46 1 9.9323 0.6498 -2.2347 47 1 11.5349 1.1457 -1.5374 48 1 4.7900 5.0235 0.7239 49 1 4.9560 6.1449 -1.3784 50 1 3.4095 7.6742 0.4856 51 1 1.6307 6.3621 -0.5307 52 1 1.3275 4.5115 -0.0015 53 1 0.2119 2.3187 0.0010 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:14:39 Heat of formation + Delta-G solvation = -195.273694 kcal Electronic energy + Delta-G solvation = -41310.542244 eV Core-core repulsion = 35280.176000 eV Total energy + Delta-G solvation = -6030.366244 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.153 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -51.23886 -48.76243 -48.71654 -41.90645 -41.54152 -40.62188 -39.88284 -38.94319 -38.18267 -37.08603 -34.85321 -32.83362 -32.38459 -32.09845 -31.40645 -29.55824 -28.36508 -27.72075 -26.71699 -26.06797 -25.12749 -24.11702 -23.69204 -22.46574 -22.37654 -21.86343 -20.27887 -19.86377 -19.59558 -19.53234 -19.40526 -18.55976 -18.52007 -17.92757 -17.47766 -17.31700 -17.17947 -16.86245 -16.64902 -16.62288 -16.38106 -15.91563 -15.71085 -15.62694 -15.55705 -15.53565 -15.44222 -15.21440 -15.17379 -14.97793 -14.88446 -14.87831 -14.59466 -14.48046 -14.36708 -14.07426 -14.02048 -13.78354 -13.65885 -13.44656 -13.37721 -13.23972 -13.19779 -12.80174 -12.49828 -12.41686 -12.38583 -11.99825 -11.91154 -11.79381 -11.75094 -11.60460 -11.26219 -11.04377 -10.40470 -10.19290 -10.06150 -9.93840 -9.70029 -9.10296 -4.94248 -0.13804 0.19345 0.26867 0.30489 1.30748 1.40102 1.41872 1.58856 1.61401 1.91414 2.24575 2.40519 2.52950 2.56915 2.68263 2.96189 3.34684 3.42394 3.47346 3.50683 3.62555 3.67893 3.72107 3.82270 3.87925 3.88419 3.93893 3.96538 4.05513 4.06792 4.18962 4.19429 4.30417 4.30921 4.37807 4.38581 4.43357 4.46402 4.61367 4.62441 4.67294 4.76906 4.79963 4.83009 4.85439 5.00035 5.00654 5.02221 5.11720 5.18365 5.19195 5.22869 5.29879 5.42898 5.46595 5.60350 5.77285 6.12024 6.35238 6.43222 6.60054 7.10280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.250 4.250 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.033 3.967 8 C 0.518 3.482 9 O -0.567 6.567 10 N -0.692 5.692 11 C 0.115 3.885 12 H 0.085 0.915 13 C -0.122 4.122 14 C -0.069 4.069 15 H 0.123 0.877 16 C -0.039 4.039 17 C -0.122 4.122 18 C -0.078 4.078 19 C -0.202 4.202 20 C 0.506 3.494 21 F -0.185 7.185 22 F -0.183 7.183 23 F -0.182 7.182 24 C -0.078 4.078 25 C -0.116 4.116 26 C -0.145 4.145 27 C -0.161 4.161 28 C -0.079 4.079 29 O -0.557 6.557 30 Si 0.777 3.223 31 C -0.042 4.042 32 C -0.239 4.239 33 H 0.071 0.929 34 H 0.065 0.935 35 H 0.118 0.882 36 H 0.158 0.842 37 H 0.127 0.873 38 H 0.119 0.881 39 H 0.421 0.579 40 H 0.102 0.898 41 H 0.094 0.906 42 H 0.150 0.850 43 H 0.140 0.860 44 H 0.143 0.857 45 H 0.158 0.842 46 H 0.069 0.931 47 H 0.098 0.902 48 H 0.068 0.932 49 H 0.388 0.612 50 H -0.291 1.291 51 H -0.281 1.281 52 H 0.150 0.850 53 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.862 -4.591 4.296 9.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.241 6.241 3 C 0.119 3.881 4 C -0.269 4.269 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.045 4.045 8 C 0.305 3.695 9 O -0.445 6.445 10 N -0.346 5.346 11 C 0.009 3.991 12 H 0.103 0.897 13 C -0.160 4.160 14 C -0.087 4.087 15 H 0.141 0.859 16 C -0.039 4.039 17 C -0.139 4.139 18 C -0.096 4.096 19 C -0.204 4.204 20 C 0.452 3.548 21 F -0.166 7.166 22 F -0.164 7.164 23 F -0.163 7.163 24 C -0.096 4.096 25 C -0.134 4.134 26 C -0.183 4.183 27 C -0.162 4.162 28 C -0.187 4.187 29 O -0.366 6.366 30 Si 0.680 3.320 31 C -0.060 4.060 32 C -0.257 4.257 33 H 0.090 0.910 34 H 0.083 0.917 35 H 0.136 0.864 36 H 0.175 0.825 37 H 0.145 0.855 38 H 0.136 0.864 39 H 0.260 0.740 40 H 0.121 0.879 41 H 0.113 0.887 42 H 0.167 0.833 43 H 0.158 0.842 44 H 0.160 0.840 45 H 0.176 0.824 46 H 0.088 0.912 47 H 0.116 0.884 48 H 0.086 0.914 49 H 0.237 0.763 50 H -0.218 1.218 51 H -0.208 1.208 52 H 0.168 0.832 53 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -6.979 -3.694 3.931 8.821 hybrid contribution 1.367 -0.140 -1.224 1.840 sum -5.612 -3.834 2.707 7.316 Atomic orbital electron populations 1.23411 0.76031 1.05760 1.02657 1.86051 1.23727 1.26395 1.87927 1.18853 0.91715 0.84896 0.92682 1.20554 0.93348 0.97402 1.15626 1.18540 0.81822 0.93091 0.93477 1.86190 1.15327 1.31770 1.88148 1.22769 0.88493 0.86501 1.06744 1.20407 0.88372 0.85197 0.75567 1.90763 1.80667 1.23236 1.49811 1.45325 1.05206 1.09513 1.74544 1.21867 0.79310 1.00148 0.97750 0.89724 1.23377 1.00856 0.95841 0.95878 1.21729 0.94092 0.96071 0.96788 0.85930 1.20144 0.95427 0.93498 0.94791 1.21244 0.91099 1.01315 1.00265 1.21116 0.99646 0.93021 0.95830 1.20028 0.91848 0.97174 1.11325 1.18539 0.86289 0.75668 0.74332 1.93218 1.95920 1.95694 1.31810 1.93181 1.64090 1.79151 1.79974 1.93183 1.96894 1.34625 1.91601 1.21168 0.91703 1.00315 0.96378 1.21355 0.97617 0.95338 0.99087 1.23589 1.01549 0.95887 0.97321 1.18753 0.93123 0.92394 1.11961 1.24952 1.04690 1.01733 0.87298 1.86556 1.76371 1.42836 1.30853 0.94193 0.76646 0.73694 0.87418 1.20892 0.92112 0.98784 0.94200 1.21381 1.01649 0.91181 1.11506 0.91043 0.91668 0.86390 0.82458 0.85543 0.86363 0.74045 0.87941 0.88704 0.83256 0.84232 0.83964 0.82429 0.91240 0.88357 0.91381 0.76317 1.21800 1.20836 0.83245 0.82487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.26 10.49 -92.40 -0.97 -1.23 16 3 C 0.16 0.38 6.68 22.49 0.15 0.53 16 4 C -0.25 -0.59 8.97 22.46 0.20 -0.39 16 5 C 0.18 1.10 6.66 22.49 0.15 1.25 16 6 O -0.30 -2.30 9.00 -73.33 -0.66 -2.96 16 7 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 8 C 0.52 1.20 7.91 87.66 0.69 1.89 16 9 O -0.57 -7.80 16.10 16.02 0.26 -7.54 16 10 N -0.69 3.99 5.26 -440.04 -2.32 1.67 16 11 C 0.11 -0.52 4.32 45.52 0.20 -0.33 16 12 H 0.08 0.08 7.47 -2.39 -0.02 0.06 16 13 C -0.12 1.12 7.29 31.12 0.23 1.35 16 14 C -0.07 0.63 3.86 -11.01 -0.04 0.59 16 15 H 0.12 -1.56 8.10 -2.39 -0.02 -1.58 16 16 C -0.04 0.21 5.29 -19.87 -0.11 0.11 16 17 C -0.12 0.48 8.62 22.27 0.19 0.67 16 18 C -0.08 0.06 9.40 22.27 0.21 0.27 16 19 C -0.20 -0.27 5.45 -19.86 -0.11 -0.38 16 20 C 0.51 2.14 3.36 71.24 0.24 2.38 16 21 F -0.19 -1.18 17.30 44.97 0.78 -0.40 16 22 F -0.18 -1.00 16.46 44.97 0.74 -0.26 16 23 F -0.18 -0.93 16.46 44.97 0.74 -0.19 16 24 C -0.08 0.12 9.40 22.27 0.21 0.33 16 25 C -0.12 0.60 9.71 22.27 0.22 0.82 16 26 C -0.14 0.81 7.25 31.12 0.23 1.04 16 27 C -0.16 -1.03 5.31 -19.75 -0.10 -1.14 16 28 C -0.08 -0.48 2.36 71.24 0.17 -0.31 16 29 O -0.56 -5.35 12.86 -148.98 -1.92 -7.26 16 30 Si 0.78 0.65 30.19 68.60 2.07 2.72 16 31 C -0.04 -0.11 8.65 22.24 0.19 0.09 16 32 C -0.24 -0.15 9.04 22.38 0.20 0.05 16 33 H 0.07 -0.60 7.66 -2.38 -0.02 -0.62 16 34 H 0.06 -0.48 7.66 -2.39 -0.02 -0.50 16 35 H 0.12 -1.11 8.14 -2.38 -0.02 -1.13 16 36 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 37 H 0.13 -1.04 7.65 -2.39 -0.02 -1.06 16 38 H 0.12 -0.79 7.67 -2.39 -0.02 -0.81 16 39 H 0.42 -5.60 8.70 -92.71 -0.81 -6.40 16 40 H 0.10 -0.91 7.73 -2.39 -0.02 -0.92 16 41 H 0.09 -1.08 8.14 -2.39 -0.02 -1.09 16 42 H 0.15 -1.08 6.64 -2.91 -0.02 -1.10 16 43 H 0.14 -0.32 7.60 -2.91 -0.02 -0.34 16 44 H 0.14 -0.51 7.60 -2.91 -0.02 -0.53 16 45 H 0.16 -1.62 8.06 -2.91 -0.02 -1.64 16 46 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 47 H 0.10 -0.55 6.30 -2.39 -0.02 -0.57 16 48 H 0.07 0.44 7.83 -2.39 -0.02 0.43 16 49 H 0.39 0.91 8.74 -74.06 -0.65 0.26 16 50 H -0.29 -1.59 7.11 99.48 0.71 -0.88 16 51 H -0.28 -1.39 6.75 99.48 0.67 -0.72 16 52 H 0.15 -0.14 4.89 -2.91 -0.01 -0.15 16 53 H 0.16 -0.75 6.29 -2.91 -0.02 -0.76 16 Total: 0.00 -29.01 449.87 2.89 -26.12 By element: Atomic # 1 Polarization: -20.38 SS G_CDS: -0.43 Total: -20.82 kcal Atomic # 6 Polarization: 5.55 SS G_CDS: 4.60 Total: 10.15 kcal Atomic # 7 Polarization: 3.99 SS G_CDS: -2.32 Total: 1.67 kcal Atomic # 8 Polarization: -15.71 SS G_CDS: -3.29 Total: -19.00 kcal Atomic # 9 Polarization: -3.10 SS G_CDS: 2.26 Total: -0.84 kcal Atomic # 14 Polarization: 0.65 SS G_CDS: 2.07 Total: 2.72 kcal Total: -29.01 2.89 -26.12 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.153 kcal (2) G-P(sol) polarization free energy of solvation -29.011 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.121 kcal (6) G-S(sol) free energy of system = (1) + (5) -195.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds