Wall clock time and date at job start Mon Mar 8 2021 05:15:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86294 * 109.47262 * 2 1 4 4 C 1.50704 * 109.46915 * 239.99747 * 2 1 3 5 5 C 1.35454 * 125.56181 * 119.95896 * 4 2 1 6 6 C 1.39840 * 107.86430 * 179.77642 * 5 4 2 7 7 C 1.37862 * 107.08396 * 0.41711 * 6 5 4 8 8 C 1.46683 * 126.23424 * 179.84828 * 7 6 5 9 9 O 1.21688 * 119.99722 * 359.69143 * 8 7 6 10 10 N 1.34781 * 120.00001 * 179.69074 * 8 7 6 11 11 C 1.46494 * 119.99663 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.85538 * 336.19988 * 11 10 8 13 13 C 1.53779 * 113.68919 * 107.46648 * 11 10 8 14 14 C 1.53779 * 87.08258 * 89.12858 * 13 11 10 15 15 H 1.09003 * 113.68900 * 270.87251 * 14 13 11 16 16 C 1.50697 * 113.61470 * 139.98317 * 14 13 11 17 17 C 1.38238 * 119.99801 * 142.50311 * 16 14 13 18 18 C 1.38235 * 120.00123 * 179.97438 * 17 16 14 19 19 C 1.38243 * 119.99602 * 359.97438 * 18 17 16 20 20 C 1.50706 * 119.99586 * 179.97438 * 19 18 17 21 21 F 1.39903 * 109.46746 * 89.99985 * 20 19 18 22 22 F 1.39901 * 109.46962 * 209.99766 * 20 19 18 23 23 F 1.39894 * 109.47464 * 329.99846 * 20 19 18 24 24 C 1.38233 * 120.00248 * 0.27275 * 19 18 17 25 25 C 1.38234 * 120.00167 * 322.47327 * 16 14 13 26 26 C 1.53774 * 87.08167 * 25.43318 * 14 13 11 27 27 N 1.35532 * 125.56609 * 299.99894 * 4 2 1 28 28 H 0.96698 * 113.99753 * 60.00001 * 1 2 3 29 29 H 1.08999 * 109.46918 * 120.00471 * 2 1 3 30 30 H 1.48494 * 110.00065 * 59.99748 * 3 2 1 31 31 H 1.48501 * 110.00234 * 181.32126 * 3 2 1 32 32 H 1.08003 * 126.06989 * 0.05602 * 5 4 2 33 33 H 1.08000 * 126.45524 * 180.29794 * 6 5 4 34 34 H 0.96998 * 119.99780 * 0.02562 * 10 8 7 35 35 H 1.08998 * 113.61906 * 334.57405 * 13 11 10 36 36 H 1.09004 * 113.61589 * 203.67499 * 13 11 10 37 37 H 1.08000 * 120.00524 * 359.97234 * 17 16 14 38 38 H 1.07999 * 120.00181 * 179.97438 * 18 17 16 39 39 H 1.08004 * 119.99934 * 179.72684 * 24 19 18 40 40 H 1.07999 * 119.99973 * 0.02562 * 25 16 14 41 41 H 1.09001 * 113.62115 * 89.11927 * 26 14 13 42 42 H 1.09003 * 113.61616 * 220.02536 * 26 14 13 43 43 H 0.97003 * 125.67803 * 359.95035 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.7127 -0.1634 -2.1922 6 6 2.9608 -1.1473 -3.1545 7 6 2.3016 -2.2875 -2.7472 8 6 2.2779 -3.5738 -3.4518 9 8 2.8758 -3.7024 -4.5038 10 7 1.5940 -4.6134 -2.9340 11 6 1.5699 -5.8978 -3.6380 12 1 1.7616 -5.7987 -4.7064 13 6 2.4135 -6.9901 -2.9596 14 6 1.1557 -7.3494 -2.1512 15 1 1.0599 -6.7919 -1.2195 16 6 0.9584 -8.8322 -1.9690 17 6 0.4632 -9.3219 -0.7748 18 6 0.2817 -10.6821 -0.6077 19 6 0.5948 -11.5525 -1.6350 20 6 0.3975 -13.0354 -1.4526 21 9 -0.8933 -13.3877 -1.8613 22 9 1.3364 -13.7291 -2.2237 23 9 0.5662 -13.3659 -0.1038 24 6 1.0948 -11.0632 -2.8273 25 6 1.2719 -9.7026 -2.9960 26 6 0.3372 -6.7569 -3.3104 27 7 1.6744 -2.0009 -1.5558 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5616 2.4678 1.2084 31 1 3.5347 1.7702 -0.0322 32 1 3.0826 0.8511 -2.2102 33 1 3.5552 -1.0345 -4.0491 34 1 1.1171 -4.5108 -2.0955 35 1 3.2273 -6.5977 -2.3498 36 1 2.7354 -7.7787 -3.6398 37 1 0.2182 -8.6419 0.0277 38 1 -0.1047 -11.0647 0.3254 39 1 1.3436 -11.7436 -3.6283 40 1 1.6586 -9.3200 -3.9290 41 1 0.0913 -7.4817 -4.0866 42 1 -0.5254 -6.1761 -2.9838 43 1 1.1380 -2.6194 -1.0356 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:15:09 Heat of formation + Delta-G solvation = -115.673148 kcal Electronic energy + Delta-G solvation = -31488.961829 eV Core-core repulsion = 26473.287175 eV Total energy + Delta-G solvation = -5015.674654 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.118 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -51.25127 -48.77707 -48.72594 -42.55432 -41.53670 -40.26936 -38.89236 -37.65212 -34.92710 -32.90579 -32.16525 -32.01809 -31.26533 -28.08376 -26.86716 -26.74851 -25.11993 -24.12303 -23.40484 -22.43463 -21.59313 -21.18018 -20.27632 -19.88363 -19.60103 -19.53567 -19.39643 -18.15146 -17.45513 -16.82046 -16.66524 -16.47399 -16.22452 -15.97542 -15.88758 -15.57145 -15.51710 -15.27431 -15.18420 -15.13642 -14.97564 -14.89169 -14.85456 -14.59161 -14.46255 -14.38218 -14.30894 -14.13605 -13.97578 -13.65327 -13.49865 -13.28784 -12.81820 -12.42143 -12.19519 -12.06556 -11.96323 -11.83828 -11.36689 -11.29280 -10.66523 -10.28354 -10.08909 -10.06778 -9.96999 -9.27089 -4.90112 -0.16339 0.24385 0.29149 1.23812 1.54327 1.59885 1.73261 1.89016 1.97893 2.21890 2.25484 2.38128 2.66650 2.94615 3.33285 3.37796 3.48239 3.58217 3.59329 3.63320 3.77477 3.80951 3.85726 3.91378 4.13929 4.26401 4.27815 4.32584 4.35630 4.45247 4.58972 4.64506 4.73783 4.79486 4.80760 4.95254 4.97075 4.98608 5.06830 5.12324 5.16050 5.16068 5.39218 5.55006 5.60284 5.74521 5.79538 6.27302 6.45079 6.68671 7.02432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.052 4.052 3 Si 0.801 3.199 4 C 0.030 3.970 5 C -0.207 4.207 6 C -0.117 4.117 7 C -0.064 4.064 8 C 0.592 3.408 9 O -0.569 6.569 10 N -0.699 5.699 11 C 0.114 3.886 12 H 0.091 0.909 13 C -0.143 4.143 14 C -0.070 4.070 15 H 0.117 0.883 16 C -0.039 4.039 17 C -0.118 4.118 18 C -0.077 4.077 19 C -0.202 4.202 20 C 0.506 3.494 21 F -0.184 7.184 22 F -0.183 7.183 23 F -0.182 7.182 24 C -0.077 4.077 25 C -0.120 4.120 26 C -0.123 4.123 27 N -0.511 5.511 28 H 0.399 0.601 29 H 0.117 0.883 30 H -0.296 1.296 31 H -0.286 1.286 32 H 0.167 0.833 33 H 0.145 0.855 34 H 0.410 0.590 35 H 0.068 0.932 36 H 0.102 0.898 37 H 0.156 0.844 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.152 0.848 41 H 0.106 0.894 42 H 0.090 0.910 43 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.209 4.981 1.808 6.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.162 4.162 3 Si 0.705 3.295 4 C -0.089 4.089 5 C -0.231 4.231 6 C -0.144 4.144 7 C -0.178 4.178 8 C 0.381 3.619 9 O -0.448 6.448 10 N -0.350 5.350 11 C 0.009 3.991 12 H 0.109 0.891 13 C -0.181 4.181 14 C -0.088 4.088 15 H 0.135 0.865 16 C -0.039 4.039 17 C -0.136 4.136 18 C -0.096 4.096 19 C -0.204 4.204 20 C 0.452 3.548 21 F -0.165 7.165 22 F -0.164 7.164 23 F -0.164 7.164 24 C -0.095 4.095 25 C -0.138 4.138 26 C -0.161 4.161 27 N -0.109 5.109 28 H 0.250 0.750 29 H 0.135 0.865 30 H -0.224 1.224 31 H -0.213 1.213 32 H 0.184 0.816 33 H 0.163 0.837 34 H 0.246 0.754 35 H 0.086 0.914 36 H 0.121 0.879 37 H 0.173 0.827 38 H 0.160 0.840 39 H 0.159 0.841 40 H 0.170 0.830 41 H 0.124 0.876 42 H 0.108 0.892 43 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -2.344 4.944 2.088 5.856 hybrid contribution -0.194 -1.601 0.764 1.784 sum -2.537 3.343 2.852 5.074 Atomic orbital electron populations 1.86475 1.16762 1.82110 1.50838 1.25005 0.85422 1.11011 0.94794 0.92988 0.77856 0.74016 0.84633 1.21328 1.02994 0.85071 0.99488 1.20946 1.05272 1.01197 0.95636 1.21493 1.00715 0.91527 1.00669 1.20277 1.09039 0.96277 0.92209 1.17212 0.78296 0.82594 0.83835 1.90851 1.46044 1.83750 1.24109 1.45414 1.52489 1.10604 1.26505 1.21905 0.98132 0.81834 0.97278 0.89101 1.23584 0.96672 0.98453 0.99417 1.21704 0.96962 0.90610 0.99524 0.86510 1.20123 0.94677 0.95862 0.93221 1.21335 0.99437 0.94507 0.98284 1.21159 0.96623 0.93848 0.97921 1.20038 1.10789 0.90151 0.99379 1.18530 0.73680 0.89094 0.73508 1.93219 1.39419 1.93538 1.90345 1.93184 1.65635 1.81990 1.75579 1.93181 1.95178 1.93986 1.34020 1.21132 0.95611 0.97104 0.95645 1.21253 1.00387 0.91753 1.00406 1.23391 0.96366 0.98311 0.97985 1.41867 1.39777 1.11280 1.17937 0.75034 0.86536 1.22377 1.21293 0.81567 0.83692 0.75382 0.91365 0.87932 0.82686 0.83998 0.84061 0.83042 0.87581 0.89152 0.73223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 3.35 12.88 -148.98 -1.92 1.43 16 2 C -0.05 0.32 3.08 71.24 0.22 0.54 16 3 Si 0.80 -4.86 30.54 68.60 2.10 -2.76 16 4 C 0.03 -0.12 6.47 41.35 0.27 0.15 16 5 C -0.21 0.39 9.32 22.01 0.21 0.59 16 6 C -0.12 -0.30 10.65 22.57 0.24 -0.06 16 7 C -0.06 -0.08 7.06 40.35 0.28 0.20 16 8 C 0.59 2.20 7.79 86.45 0.67 2.87 16 9 O -0.57 -7.16 16.48 -4.31 -0.07 -7.24 16 10 N -0.70 2.85 5.26 -444.00 -2.34 0.51 16 11 C 0.11 -0.48 4.32 45.52 0.20 -0.28 16 12 H 0.09 0.04 7.46 -2.39 -0.02 0.02 16 13 C -0.14 0.80 7.26 31.12 0.23 1.03 16 14 C -0.07 0.61 3.86 -11.02 -0.04 0.56 16 15 H 0.12 -1.36 8.09 -2.39 -0.02 -1.38 16 16 C -0.04 0.21 5.29 -19.87 -0.11 0.10 16 17 C -0.12 0.57 9.71 22.27 0.22 0.79 16 18 C -0.08 0.11 9.40 22.27 0.21 0.32 16 19 C -0.20 -0.25 5.45 -19.86 -0.11 -0.36 16 20 C 0.51 2.07 3.37 71.24 0.24 2.31 16 21 F -0.18 -1.09 17.30 44.97 0.78 -0.31 16 22 F -0.18 -0.98 16.45 44.97 0.74 -0.24 16 23 F -0.18 -0.95 16.46 44.97 0.74 -0.21 16 24 C -0.08 0.08 9.40 22.27 0.21 0.29 16 25 C -0.12 0.50 8.61 22.27 0.19 0.70 16 26 C -0.12 1.07 7.29 31.12 0.23 1.30 16 27 N -0.51 2.31 5.99 -171.93 -1.03 1.28 16 28 H 0.40 -5.21 8.70 -74.06 -0.64 -5.86 16 29 H 0.12 -0.71 7.96 -2.39 -0.02 -0.72 16 30 H -0.30 -0.37 7.11 99.48 0.71 0.34 16 31 H -0.29 0.09 7.11 99.48 0.71 0.80 16 32 H 0.17 -0.98 6.17 -2.91 -0.02 -1.00 16 33 H 0.15 0.49 8.06 -2.91 -0.02 0.47 16 34 H 0.41 -4.22 7.83 -92.71 -0.73 -4.94 16 35 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 36 H 0.10 -0.64 6.31 -2.38 -0.02 -0.65 16 37 H 0.16 -1.49 8.05 -2.91 -0.02 -1.52 16 38 H 0.14 -0.48 7.60 -2.91 -0.02 -0.50 16 39 H 0.14 -0.39 7.60 -2.91 -0.02 -0.41 16 40 H 0.15 -1.19 6.66 -2.91 -0.02 -1.20 16 41 H 0.11 -0.94 7.72 -2.39 -0.02 -0.96 16 42 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 43 H 0.43 -4.23 8.19 -92.71 -0.76 -4.99 16 Total: 0.00 -21.58 376.61 1.37 -20.21 By element: Atomic # 1 Polarization: -22.74 SS G_CDS: -0.97 Total: -23.71 kcal Atomic # 6 Polarization: 7.69 SS G_CDS: 3.35 Total: 11.04 kcal Atomic # 7 Polarization: 5.16 SS G_CDS: -3.37 Total: 1.79 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -1.99 Total: -5.81 kcal Atomic # 9 Polarization: -3.01 SS G_CDS: 2.26 Total: -0.75 kcal Atomic # 14 Polarization: -4.86 SS G_CDS: 2.10 Total: -2.76 kcal Total: -21.58 1.37 -20.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.466 kcal (2) G-P(sol) polarization free energy of solvation -21.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds