Wall clock time and date at job start Mon Mar 8 2021 05:16:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.34456 * 126.48419 * 104.69164 * 4 2 1 6 6 N 1.36564 * 109.98930 * 179.86703 * 5 4 2 7 7 C 1.37831 * 109.85754 * 0.40704 * 6 5 4 8 8 C 1.38642 * 133.38268 * 179.78155 * 7 6 5 9 9 C 1.39319 * 119.66850 * 179.97438 * 8 7 6 10 10 C 1.47580 * 119.83328 * 179.97438 * 9 8 7 11 11 O 1.21596 * 119.99481 * 359.97438 * 10 9 8 12 12 N 1.34768 * 120.00057 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00026 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84776 * 23.81063 * 13 12 10 15 15 C 1.53777 * 113.61528 * 155.00074 * 13 12 10 16 16 C 1.53786 * 87.08224 * 89.11967 * 15 13 12 17 17 H 1.09009 * 113.61412 * 270.80218 * 16 15 13 18 18 C 1.50695 * 113.61624 * 139.98271 * 16 15 13 19 19 C 1.38445 * 120.01205 * 119.72601 * 18 16 15 20 20 F 1.35094 * 120.02229 * 359.97438 * 19 18 16 21 21 C 1.38477 * 119.94252 * 179.72453 * 19 18 16 22 22 C 1.38172 * 119.97840 * 0.57352 * 21 19 18 23 23 C 1.38270 * 120.02662 * 359.69773 * 22 21 19 24 24 C 1.38217 * 120.01182 * 299.99843 * 18 16 15 25 25 C 1.53780 * 113.61676 * 252.50138 * 13 12 10 26 26 C 1.40199 * 120.33276 * 359.97438 * 9 8 7 27 27 C 1.36230 * 120.38394 * 0.02562 * 26 9 8 28 28 C 1.39876 * 119.95405 * 359.96407 * 27 26 9 29 29 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 30 30 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 31 31 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 32 32 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 33 33 H 1.08004 * 125.00657 * 359.97438 * 5 4 2 34 34 H 0.97002 * 125.06777 * 180.16206 * 6 5 4 35 35 H 1.08006 * 120.16669 * 359.95126 * 8 7 6 36 36 H 0.97001 * 120.00258 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.62217 * 203.66540 * 15 13 12 38 38 H 1.09004 * 113.61567 * 334.49021 * 15 13 12 39 39 H 1.08002 * 120.00907 * 180.29134 * 21 19 18 40 40 H 1.08004 * 119.98891 * 179.72364 * 22 21 19 41 41 H 1.07994 * 119.97239 * 180.02562 * 23 22 21 42 42 H 1.07997 * 119.99194 * 359.95892 * 24 18 16 43 43 H 1.09001 * 113.61688 * 25.43074 * 25 13 12 44 44 H 1.08994 * 113.61651 * 156.33565 * 25 13 12 45 45 H 1.08005 * 119.80814 * 179.97438 * 26 9 8 46 46 H 1.07993 * 120.02182 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4563 -0.1361 -2.3269 6 7 2.8028 -1.0948 -3.2356 7 6 2.4942 -2.3432 -2.7398 8 6 2.6308 -3.6280 -3.2426 9 6 2.2137 -4.7156 -2.4784 10 6 2.3569 -6.0848 -3.0103 11 8 2.8375 -6.2613 -4.1131 12 7 1.9549 -7.1393 -2.2736 13 6 2.0965 -8.4984 -2.8019 14 1 2.8748 -8.5785 -3.5608 15 6 2.1877 -9.5773 -1.7099 16 6 0.6530 -9.6566 -1.7705 17 1 0.1529 -8.9630 -1.0944 18 6 0.1167 -11.0613 -1.6697 19 6 -0.7303 -11.4062 -0.6302 20 9 -1.0760 -10.4839 0.2944 21 6 -1.2269 -12.6958 -0.5422 22 6 -0.8673 -13.6400 -1.4848 23 6 -0.0169 -13.2959 -2.5192 24 6 0.4746 -12.0072 -2.6117 25 6 0.7619 -9.1409 -3.2152 26 6 1.6585 -4.5160 -1.2065 27 6 1.5206 -3.2569 -0.7048 28 6 1.9350 -2.1549 -1.4600 29 1 -0.3934 0.4417 -0.7651 30 1 1.7923 -0.5139 0.8900 31 1 1.5879 2.4585 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 2.5865 0.9268 -2.4675 34 1 3.2028 -0.9225 -4.1024 35 1 3.0582 -3.7850 -4.2220 36 1 1.5711 -6.9984 -1.3940 37 1 2.6852 -10.4899 -2.0381 38 1 2.5698 -9.2053 -0.7593 39 1 -1.8915 -12.9648 0.2656 40 1 -1.2510 -14.6471 -1.4137 41 1 0.2633 -14.0344 -3.2557 42 1 1.1383 -11.7395 -3.4205 43 1 -0.0083 -8.4163 -3.4793 44 1 0.8697 -9.9341 -3.9549 45 1 1.3375 -5.3652 -0.6215 46 1 1.0926 -3.1099 0.2757 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:16:36 Heat of formation + Delta-G solvation = 8.260000 kcal Electronic energy + Delta-G solvation = -31190.698011 eV Core-core repulsion = 26734.627031 eV Total energy + Delta-G solvation = -4456.070980 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.91763 -42.48213 -41.56955 -40.33237 -38.85998 -37.95376 -37.49909 -34.72178 -33.27538 -31.98076 -31.42641 -30.73802 -30.42537 -26.75631 -26.66716 -26.31884 -24.79759 -23.68574 -23.65220 -22.65134 -21.65490 -20.82475 -20.20799 -19.48610 -18.78189 -18.36112 -17.64266 -17.47061 -17.23257 -16.99364 -16.75468 -16.64058 -16.24867 -16.03360 -15.93410 -15.66036 -15.31083 -15.11108 -15.04276 -14.98980 -14.77223 -14.69612 -14.38148 -14.14293 -13.92640 -13.89735 -13.49089 -13.09155 -13.05897 -13.01832 -12.65063 -12.49997 -12.37195 -12.21772 -11.92570 -11.77690 -11.77568 -11.26275 -11.15405 -10.79912 -10.45484 -10.19233 -9.87752 -9.57580 -9.37867 -8.80854 -4.83697 -0.33903 0.18297 0.24887 0.35950 1.37824 1.39574 1.63974 1.85910 1.87483 2.04555 2.22579 2.60726 2.84885 3.26874 3.40893 3.55121 3.56525 3.58247 3.65595 3.70157 3.82775 3.85600 3.90439 3.92403 4.08865 4.10493 4.17231 4.29256 4.36314 4.38784 4.47913 4.50706 4.58929 4.61543 4.72558 4.77675 4.83269 4.86442 4.95622 4.96951 4.98706 5.07972 5.11872 5.19936 5.25178 5.38462 5.40664 5.47935 5.49333 5.57725 5.60638 5.95589 5.96920 6.41930 6.51477 6.61952 7.09672 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.050 4.050 3 Si 0.775 3.225 4 C -0.225 4.225 5 C 0.091 3.909 6 N -0.576 5.576 7 C 0.068 3.932 8 C -0.065 4.065 9 C -0.137 4.137 10 C 0.565 3.435 11 O -0.578 6.578 12 N -0.697 5.697 13 C 0.116 3.884 14 H 0.096 0.904 15 C -0.122 4.122 16 C -0.074 4.074 17 H 0.096 0.904 18 C -0.111 4.111 19 C 0.072 3.928 20 F -0.151 7.151 21 C -0.164 4.164 22 C -0.099 4.099 23 C -0.128 4.128 24 C -0.094 4.094 25 C -0.138 4.138 26 C -0.109 4.109 27 C -0.084 4.084 28 C -0.079 4.079 29 H 0.384 0.616 30 H 0.113 0.887 31 H -0.268 1.268 32 H -0.309 1.309 33 H 0.208 0.792 34 H 0.435 0.565 35 H 0.130 0.870 36 H 0.413 0.587 37 H 0.111 0.889 38 H 0.084 0.916 39 H 0.141 0.859 40 H 0.152 0.848 41 H 0.152 0.848 42 H 0.151 0.849 43 H 0.065 0.935 44 H 0.108 0.892 45 H 0.148 0.852 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.607 0.178 -0.370 2.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.158 4.158 3 Si 0.679 3.321 4 C -0.232 4.232 5 C -0.038 4.038 6 N -0.179 5.179 7 C -0.039 4.039 8 C -0.086 4.086 9 C -0.141 4.141 10 C 0.355 3.645 11 O -0.459 6.459 12 N -0.349 5.349 13 C 0.011 3.989 14 H 0.114 0.886 15 C -0.160 4.160 16 C -0.092 4.092 17 H 0.114 0.886 18 C -0.112 4.112 19 C 0.053 3.947 20 F -0.130 7.130 21 C -0.182 4.182 22 C -0.117 4.117 23 C -0.146 4.146 24 C -0.112 4.112 25 C -0.176 4.176 26 C -0.128 4.128 27 C -0.102 4.102 28 C -0.084 4.084 29 H 0.233 0.767 30 H 0.131 0.869 31 H -0.194 1.194 32 H -0.237 1.237 33 H 0.224 0.776 34 H 0.275 0.725 35 H 0.148 0.852 36 H 0.251 0.749 37 H 0.129 0.871 38 H 0.102 0.898 39 H 0.159 0.841 40 H 0.170 0.830 41 H 0.170 0.830 42 H 0.169 0.831 43 H 0.083 0.917 44 H 0.126 0.874 45 H 0.165 0.835 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.878 0.620 -0.690 3.024 hybrid contribution -1.472 0.061 -0.172 1.484 sum 1.406 0.681 -0.862 1.784 Atomic orbital electron populations 1.86575 1.19200 1.80485 1.49924 1.24581 0.82697 1.11428 0.97122 0.94149 0.89949 0.71039 0.77007 1.20758 1.12052 0.91444 0.98971 1.22296 0.97590 0.95602 0.88344 1.41796 1.54021 1.03224 1.18884 1.18111 1.03807 0.86827 0.95157 1.20131 0.99701 0.88724 1.00064 1.19437 1.06260 0.91749 0.96645 1.18347 0.76687 0.85317 0.84175 1.90762 1.46642 1.86721 1.21798 1.45507 1.63215 1.05086 1.21051 1.21881 0.98614 0.80712 0.97716 0.88631 1.23392 0.94292 0.98958 0.99314 1.21506 0.96814 0.92315 0.98556 0.88582 1.19886 0.98697 0.97323 0.95257 1.17914 0.99977 0.87423 0.89420 1.91447 1.91017 1.65834 1.64714 1.21410 1.02644 0.91953 1.02240 1.21367 0.96896 1.00053 0.93411 1.21590 0.97197 0.96923 0.98849 1.21201 0.99390 0.92437 0.98175 1.23564 0.97343 1.00587 0.96101 1.20878 0.99725 0.98080 0.94156 1.20393 0.99000 0.90654 1.00160 1.19540 1.00920 0.94159 0.93822 0.76747 0.86929 1.19370 1.23705 0.77570 0.72509 0.85172 0.74930 0.87071 0.89759 0.84122 0.83005 0.83032 0.83111 0.91669 0.87363 0.83463 0.84402 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.51 12.88 -148.98 -1.92 -3.43 16 2 C -0.05 0.05 3.06 71.24 0.22 0.27 16 3 Si 0.77 -3.46 30.83 68.60 2.11 -1.35 16 4 C -0.22 0.06 5.57 -18.64 -0.10 -0.04 16 5 C 0.09 -0.42 10.43 83.09 0.87 0.44 16 6 N -0.58 1.76 6.07 -187.71 -1.14 0.62 16 7 C 0.07 0.22 7.26 38.96 0.28 0.50 16 8 C -0.06 -0.36 9.61 22.63 0.22 -0.15 16 9 C -0.14 -0.74 5.87 -20.08 -0.12 -0.85 16 10 C 0.57 4.24 7.76 86.71 0.67 4.91 16 11 O -0.58 -8.59 15.91 -4.02 -0.06 -8.65 16 12 N -0.70 -0.92 5.21 -443.17 -2.31 -3.23 16 13 C 0.12 0.04 4.32 45.52 0.20 0.23 16 14 H 0.10 0.33 7.46 -2.39 -0.02 0.31 16 15 C -0.12 0.38 7.29 31.12 0.23 0.60 16 16 C -0.07 0.07 3.78 -11.01 -0.04 0.03 16 17 H 0.10 0.00 7.45 -2.38 -0.02 -0.01 16 18 C -0.11 -0.12 5.29 -19.82 -0.10 -0.23 16 19 C 0.07 0.30 7.25 22.38 0.16 0.46 16 20 F -0.15 -1.05 16.36 44.97 0.74 -0.31 16 21 C -0.16 -0.25 10.03 22.31 0.22 -0.03 16 22 C -0.10 0.18 10.04 22.26 0.22 0.40 16 23 C -0.13 0.37 10.04 22.27 0.22 0.60 16 24 C -0.09 0.19 8.61 22.26 0.19 0.38 16 25 C -0.14 0.09 7.25 31.12 0.23 0.32 16 26 C -0.11 -0.17 9.46 22.28 0.21 0.04 16 27 C -0.08 -0.24 10.03 22.20 0.22 -0.01 16 28 C -0.08 -0.30 6.35 -20.14 -0.13 -0.43 16 29 H 0.38 -1.20 8.70 -74.06 -0.64 -1.84 16 30 H 0.11 -0.14 7.96 -2.38 -0.02 -0.16 16 31 H -0.27 0.85 6.99 99.48 0.70 1.54 16 32 H -0.31 -1.39 7.11 99.48 0.71 -0.68 16 33 H 0.21 -2.38 6.28 -2.91 -0.02 -2.40 16 34 H 0.43 -3.74 8.96 -92.71 -0.83 -4.57 16 35 H 0.13 0.76 7.62 -2.91 -0.02 0.74 16 36 H 0.41 -1.38 6.69 -92.71 -0.62 -2.00 16 37 H 0.11 -0.55 7.72 -2.39 -0.02 -0.57 16 38 H 0.08 -0.32 8.14 -2.38 -0.02 -0.34 16 39 H 0.14 -0.10 8.06 -2.91 -0.02 -0.13 16 40 H 0.15 -0.96 8.06 -2.91 -0.02 -0.99 16 41 H 0.15 -1.14 8.06 -2.91 -0.02 -1.17 16 42 H 0.15 -0.93 6.66 -2.91 -0.02 -0.95 16 43 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 44 H 0.11 -0.33 6.31 -2.39 -0.02 -0.35 16 45 H 0.15 -0.62 6.36 -2.91 -0.02 -0.63 16 46 H 0.14 0.08 8.06 -2.91 -0.02 0.06 16 Total: 0.00 -23.21 387.36 0.30 -22.91 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: -0.99 Total: -14.02 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 3.87 Total: 7.45 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -3.45 Total: -2.61 kcal Atomic # 8 Polarization: -10.10 SS G_CDS: -1.98 Total: -12.08 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 0.74 Total: -0.31 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.11 Total: -1.35 kcal Total: -23.21 0.30 -22.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.173 kcal (2) G-P(sol) polarization free energy of solvation -23.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.913 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds