Wall clock time and date at job start Mon Mar 8 2021 05:17:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47005 * 2 1 4 4 C 1.50699 * 109.47386 * 120.00503 * 2 1 3 5 5 C 1.38189 * 119.83654 * 255.02443 * 4 2 1 6 6 C 1.38322 * 120.13989 * 179.97438 * 5 4 2 7 7 F 1.35097 * 120.07724 * 180.02562 * 6 5 4 8 8 C 1.39799 * 119.83132 * 359.74132 * 6 5 4 9 9 C 1.47692 * 120.15434 * 180.27860 * 8 6 5 10 10 O 1.21571 * 120.00020 * 0.23162 * 9 8 6 11 11 N 1.34778 * 120.00052 * 180.22951 * 9 8 6 12 12 C 1.46508 * 120.00123 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.84578 * 23.79649 * 12 11 9 14 14 C 1.53771 * 113.61464 * 154.99886 * 12 11 9 15 15 C 1.53775 * 87.08358 * 89.11545 * 14 12 11 16 16 H 1.09001 * 113.61475 * 270.88317 * 15 14 12 17 17 C 1.50703 * 113.61641 * 140.06223 * 15 14 12 18 18 C 1.38436 * 120.01196 * 120.00180 * 17 15 14 19 19 F 1.35103 * 120.02553 * 0.02562 * 18 17 15 20 20 C 1.38480 * 119.95026 * 180.02562 * 18 17 15 21 21 C 1.38175 * 119.97491 * 359.97438 * 20 18 17 22 22 C 1.38266 * 120.02293 * 359.97438 * 21 20 18 23 23 C 1.38215 * 120.01416 * 299.72363 * 17 15 14 24 24 C 1.53782 * 113.61032 * 252.49913 * 12 11 9 25 25 C 1.39657 * 119.69347 * 0.50967 * 8 6 5 26 26 C 1.38072 * 119.84896 * 359.48783 * 25 8 6 27 27 F 1.35101 * 119.91643 * 180.27415 * 26 25 8 28 28 H 0.96696 * 114.00046 * 299.99195 * 1 2 3 29 29 H 1.09007 * 109.46848 * 240.00479 * 2 1 3 30 30 H 1.48501 * 110.00087 * 178.68124 * 3 2 1 31 31 H 1.48500 * 110.00430 * 300.00480 * 3 2 1 32 32 H 1.07993 * 119.93033 * 359.94881 * 5 4 2 33 33 H 0.96996 * 120.00069 * 359.97438 * 11 9 8 34 34 H 1.09012 * 113.61500 * 203.66222 * 14 12 11 35 35 H 1.08999 * 113.62061 * 334.56546 * 14 12 11 36 36 H 1.08003 * 120.01615 * 179.97438 * 20 18 17 37 37 H 1.07995 * 119.99131 * 179.97438 * 21 20 18 38 38 H 1.07997 * 119.97406 * 180.02562 * 22 21 20 39 39 H 1.07997 * 119.98897 * 0.02562 * 23 17 15 40 40 H 1.08996 * 113.61747 * 25.42528 * 24 12 11 41 41 H 1.09002 * 113.61192 * 156.33912 * 24 12 11 42 42 H 1.08002 * 120.07918 * 179.77463 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4527 0.0198 2.2814 6 6 2.9151 -0.6259 3.4139 7 9 3.4239 0.0894 4.4408 8 6 2.8490 -2.0199 3.4955 9 6 3.3351 -2.7162 4.7038 10 8 3.7900 -2.0767 5.6323 11 7 3.2742 -4.0606 4.7773 12 6 3.7558 -4.7513 5.9762 13 1 3.7473 -4.1167 6.8624 14 6 3.1057 -6.1272 6.1975 15 6 4.2393 -6.7133 5.3396 16 1 4.0132 -6.7359 4.2735 17 6 4.7677 -8.0277 5.8536 18 6 4.7022 -9.1590 5.0584 19 9 4.1651 -9.0853 3.8209 20 6 5.1877 -10.3662 5.5322 21 6 5.7372 -10.4404 6.7978 22 6 5.8031 -9.3096 7.5908 23 6 5.3231 -8.1030 7.1170 24 6 5.0825 -5.4996 5.7648 25 6 2.3258 -2.7514 2.4270 26 6 1.8678 -2.0937 1.3027 27 9 1.3563 -2.7996 0.2707 28 1 -0.3933 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 3.5346 1.7703 0.0321 31 1 1.5614 2.4680 -1.2084 32 1 2.4995 1.0969 2.2182 33 1 2.9108 -4.5708 4.0367 34 1 3.1277 -6.4587 7.2357 35 1 2.1198 -6.2226 5.7425 36 1 5.1367 -11.2496 4.9129 37 1 6.1155 -11.3818 7.1678 38 1 6.2331 -9.3684 8.5797 39 1 5.3780 -7.2198 7.7361 40 1 5.6925 -5.0883 4.9606 41 1 5.6450 -5.6595 6.6847 42 1 2.2752 -3.8288 2.4819 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:17:21 Heat of formation + Delta-G solvation = -108.510890 kcal Electronic energy + Delta-G solvation = -31613.330608 eV Core-core repulsion = 26690.703923 eV Total energy + Delta-G solvation = -4922.626686 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.14406 -50.10873 -49.92843 -41.79248 -40.74841 -39.86041 -38.76931 -37.64406 -34.96971 -33.27153 -31.73094 -31.41269 -31.39793 -28.01216 -26.77102 -26.27325 -24.42399 -24.22432 -23.58364 -22.68096 -22.05635 -20.32452 -19.72975 -18.88783 -18.65604 -18.56144 -17.95372 -17.50251 -17.37744 -17.14286 -16.84208 -16.72976 -16.65093 -16.57139 -16.12875 -15.99949 -15.88382 -15.58633 -15.38131 -15.27059 -15.05584 -14.92880 -14.53030 -14.20860 -14.16466 -13.94041 -13.84054 -13.50571 -13.19070 -13.10380 -13.04168 -12.97650 -12.39904 -12.35662 -12.18895 -11.94347 -11.79732 -11.29494 -11.27760 -10.63364 -10.60932 -10.24458 -9.89240 -9.84701 -9.58576 -5.06141 -0.84336 -0.33642 0.17374 0.23994 1.14902 1.35027 1.61389 1.78155 1.92976 2.20179 2.59840 2.76125 2.81336 3.09136 3.24600 3.27139 3.39153 3.46261 3.52974 3.56620 3.63279 3.77630 3.81410 3.90719 4.08162 4.11847 4.17012 4.29325 4.30784 4.35453 4.37811 4.48881 4.59408 4.66709 4.69194 4.72083 4.79275 4.83508 4.94431 4.97691 5.04553 5.10622 5.23683 5.33901 5.36712 5.48019 5.52318 5.94697 6.24990 6.67396 6.93460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.079 4.079 3 Si 0.781 3.219 4 C -0.096 4.096 5 C -0.119 4.119 6 C 0.144 3.856 7 F -0.120 7.120 8 C -0.149 4.149 9 C 0.562 3.438 10 O -0.555 6.555 11 N -0.693 5.693 12 C 0.117 3.883 13 H 0.099 0.901 14 C -0.121 4.121 15 C -0.075 4.075 16 H 0.097 0.903 17 C -0.111 4.111 18 C 0.072 3.928 19 F -0.151 7.151 20 C -0.164 4.164 21 C -0.100 4.100 22 C -0.128 4.128 23 C -0.094 4.094 24 C -0.137 4.137 25 C -0.080 4.080 26 C 0.099 3.901 27 F -0.131 7.131 28 H 0.399 0.601 29 H 0.113 0.887 30 H -0.280 1.280 31 H -0.290 1.290 32 H 0.183 0.817 33 H 0.413 0.587 34 H 0.111 0.889 35 H 0.085 0.915 36 H 0.140 0.860 37 H 0.151 0.849 38 H 0.152 0.848 39 H 0.152 0.848 40 H 0.067 0.933 41 H 0.108 0.892 42 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.851 -1.556 2.696 3.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.188 4.188 3 Si 0.685 3.315 4 C -0.098 4.098 5 C -0.137 4.137 6 C 0.123 3.877 7 F -0.098 7.098 8 C -0.153 4.153 9 C 0.349 3.651 10 O -0.434 6.434 11 N -0.345 5.345 12 C 0.012 3.988 13 H 0.117 0.883 14 C -0.159 4.159 15 C -0.093 4.093 16 H 0.115 0.885 17 C -0.112 4.112 18 C 0.053 3.947 19 F -0.130 7.130 20 C -0.183 4.183 21 C -0.118 4.118 22 C -0.146 4.146 23 C -0.112 4.112 24 C -0.176 4.176 25 C -0.099 4.099 26 C 0.079 3.921 27 F -0.109 7.109 28 H 0.250 0.750 29 H 0.131 0.869 30 H -0.206 1.206 31 H -0.218 1.218 32 H 0.200 0.800 33 H 0.252 0.748 34 H 0.130 0.870 35 H 0.104 0.896 36 H 0.158 0.842 37 H 0.169 0.831 38 H 0.169 0.831 39 H 0.170 0.830 40 H 0.085 0.915 41 H 0.127 0.873 42 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 0.002 -0.852 2.354 2.503 hybrid contribution -0.075 -1.120 -1.106 1.575 sum -0.073 -1.971 1.248 2.334 Atomic orbital electron populations 1.86556 1.16180 1.82161 1.50579 1.25298 0.86065 1.11581 0.95876 0.93789 0.78248 0.73813 0.85672 1.20584 0.98961 0.92545 0.97670 1.21009 0.99847 1.02093 0.90750 1.17771 0.95962 0.88261 0.85719 1.91616 1.83833 1.77434 1.56957 1.19809 1.06535 0.92604 0.96384 1.18025 0.78193 0.82799 0.86070 1.90869 1.46452 1.66684 1.39409 1.45485 1.63273 1.05396 1.20392 1.21916 0.95325 0.93376 0.88227 0.88307 1.23398 0.98083 0.92455 1.01990 1.21532 0.97471 0.90062 1.00254 0.88457 1.19880 1.01882 0.94023 0.95376 1.17910 1.00270 0.95664 0.80891 1.91449 1.84158 1.97093 1.40315 1.21412 1.01522 0.96874 0.98500 1.21364 0.97433 1.00293 0.92668 1.21593 0.99484 0.92265 1.01242 1.21207 0.96533 0.99296 0.94132 1.23572 0.96449 0.94413 1.03155 1.21314 0.96251 1.02191 0.90161 1.17410 0.99418 0.89266 0.86011 1.91565 1.84472 1.78297 1.56562 0.74995 0.86934 1.20612 1.21766 0.80018 0.74847 0.87026 0.89605 0.84186 0.83085 0.83070 0.83036 0.91454 0.87332 0.80735 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.09 12.88 -148.98 -1.92 -0.83 16 2 C -0.08 0.22 2.44 71.24 0.17 0.40 16 3 Si 0.78 -3.83 29.90 68.60 2.05 -1.78 16 4 C -0.10 0.25 5.27 -19.78 -0.10 0.14 16 5 C -0.12 0.43 8.62 22.28 0.19 0.62 16 6 C 0.14 0.25 7.28 22.67 0.17 0.42 16 7 F -0.12 -0.85 15.55 44.97 0.70 -0.15 16 8 C -0.15 -0.12 5.88 -20.06 -0.12 -0.24 16 9 C 0.56 2.27 7.77 86.74 0.67 2.95 16 10 O -0.56 -6.89 14.94 -3.94 -0.06 -6.95 16 11 N -0.69 1.50 5.21 -443.05 -2.31 -0.81 16 12 C 0.12 -0.27 4.32 45.51 0.20 -0.08 16 13 H 0.10 0.08 7.46 -2.39 -0.02 0.06 16 14 C -0.12 0.65 7.29 31.12 0.23 0.87 16 15 C -0.07 0.22 3.77 -11.01 -0.04 0.18 16 16 H 0.10 -0.23 7.45 -2.39 -0.02 -0.25 16 17 C -0.11 0.04 5.29 -19.82 -0.10 -0.07 16 18 C 0.07 0.22 7.25 22.37 0.16 0.38 16 19 F -0.15 -0.86 16.36 44.97 0.74 -0.12 16 20 C -0.16 -0.12 10.03 22.31 0.22 0.10 16 21 C -0.10 0.25 10.04 22.26 0.22 0.47 16 22 C -0.13 0.48 10.04 22.27 0.22 0.71 16 23 C -0.09 0.30 8.63 22.26 0.19 0.50 16 24 C -0.14 0.40 7.26 31.12 0.23 0.63 16 25 C -0.08 0.27 9.51 22.57 0.21 0.48 16 26 C 0.10 -0.09 7.23 22.33 0.16 0.07 16 27 F -0.13 -0.33 16.73 44.97 0.75 0.43 16 28 H 0.40 -4.39 8.70 -74.06 -0.64 -5.04 16 29 H 0.11 -0.11 7.89 -2.38 -0.02 -0.13 16 30 H -0.28 -0.02 7.11 99.48 0.71 0.68 16 31 H -0.29 -0.76 7.11 99.48 0.71 -0.05 16 32 H 0.18 -1.68 5.10 -2.91 -0.01 -1.70 16 33 H 0.41 -3.07 6.73 -92.71 -0.62 -3.70 16 34 H 0.11 -0.76 7.73 -2.38 -0.02 -0.78 16 35 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 36 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 37 H 0.15 -1.04 8.06 -2.91 -0.02 -1.06 16 38 H 0.15 -1.25 8.06 -2.91 -0.02 -1.27 16 39 H 0.15 -1.13 6.65 -2.91 -0.02 -1.15 16 40 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.11 -0.53 6.31 -2.39 -0.02 -0.55 16 42 H 0.18 -1.59 6.41 -2.91 -0.02 -1.61 16 Total: 0.00 -21.78 364.62 2.73 -19.05 By element: Atomic # 1 Polarization: -17.27 SS G_CDS: -0.10 Total: -17.37 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: 2.89 Total: 8.54 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -2.31 Total: -0.81 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.98 Total: -7.78 kcal Atomic # 9 Polarization: -2.03 SS G_CDS: 2.19 Total: 0.16 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.05 Total: -1.78 kcal Total: -21.78 2.73 -19.05 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.461 kcal (2) G-P(sol) polarization free energy of solvation -21.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.734 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.050 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds