Wall clock time and date at job start Mon Mar 8 2021 05:17:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.39282 * 121.02989 * 2 1 4 4 C 1.46502 * 134.20452 * 359.95501 * 3 2 1 5 5 C 1.50699 * 126.59551 * 0.04587 * 4 3 2 6 6 O 1.42900 * 109.47326 * 75.00072 * 5 4 3 7 7 Si 1.86298 * 109.47031 * 194.99825 * 5 4 3 8 8 C 1.34172 * 106.79977 * 180.02562 * 4 3 2 9 9 N 1.36945 * 109.95714 * 0.02562 * 8 4 3 10 10 C 1.37147 * 110.11115 * 0.02562 * 9 8 4 11 11 N 1.32834 * 132.96475 * 180.30135 * 10 9 8 12 12 C 1.31302 * 121.89012 * 180.23367 * 11 10 9 13 13 C 1.39750 * 121.02980 * 179.97438 * 2 1 3 14 14 C 1.47668 * 120.45348 * 0.03737 * 13 2 1 15 15 O 1.21577 * 119.99850 * 354.01217 * 14 13 2 16 16 N 1.34777 * 120.00053 * 174.01167 * 14 13 2 17 17 C 1.46489 * 120.00072 * 180.02562 * 16 14 13 18 18 H 1.08995 * 112.85212 * 336.19691 * 17 16 14 19 19 C 1.53788 * 113.61420 * 107.50329 * 17 16 14 20 20 C 1.53780 * 87.08077 * 89.11415 * 19 17 16 21 21 H 1.08991 * 113.69401 * 270.87353 * 20 19 17 22 22 C 1.50707 * 113.61225 * 139.97824 * 20 19 17 23 23 C 1.38433 * 120.00949 * 142.50019 * 22 20 19 24 24 F 1.35104 * 120.02908 * 0.03399 * 23 22 20 25 25 C 1.38484 * 119.94807 * 180.02562 * 23 22 20 26 26 C 1.38172 * 119.97503 * 0.02562 * 25 23 22 27 27 C 1.38271 * 120.02459 * 0.02562 * 26 25 23 28 28 C 1.38221 * 120.01413 * 322.23294 * 22 20 19 29 29 C 1.53782 * 113.61647 * 204.99811 * 17 16 14 30 30 H 1.09001 * 109.46983 * 263.73299 * 1 2 3 31 31 H 1.09000 * 109.47105 * 23.73183 * 1 2 3 32 32 H 1.08994 * 109.47229 * 143.73266 * 1 2 3 33 33 H 1.09003 * 109.47465 * 314.99904 * 5 4 3 34 34 H 0.96697 * 113.99794 * 59.99617 * 6 5 4 35 35 H 1.48494 * 110.00321 * 179.97438 * 7 5 4 36 36 H 1.48504 * 109.99888 * 301.32036 * 7 5 4 37 37 H 1.08004 * 125.01976 * 180.02562 * 8 4 3 38 38 H 0.97003 * 124.94326 * 180.02562 * 9 8 4 39 39 H 1.07995 * 119.31402 * 179.70842 * 12 11 10 40 40 H 0.97001 * 119.99667 * 0.02562 * 16 14 13 41 41 H 1.09007 * 113.61051 * 203.66391 * 19 17 16 42 42 H 1.08993 * 113.61467 * 334.56365 * 19 17 16 43 43 H 1.08001 * 120.01160 * 179.97438 * 25 23 22 44 44 H 1.07997 * 119.98606 * 179.97438 * 26 25 23 45 45 H 1.07994 * 119.97525 * 180.02562 * 27 26 25 46 46 H 1.07997 * 119.98553 * 359.97438 * 28 22 20 47 47 H 1.09004 * 113.60939 * 25.43284 * 29 17 16 48 48 H 1.08994 * 113.61761 * 156.24953 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6101 -0.0008 5 6 0.4527 3.1705 -0.0010 6 8 -0.1190 3.0248 1.3005 7 14 0.5071 4.9761 -0.4567 8 6 2.9949 3.3125 -0.0009 9 7 4.0669 2.4604 -0.0008 10 6 3.6348 1.1588 -0.0012 11 7 4.2721 -0.0067 0.0039 12 6 3.6267 -1.1502 -0.0024 13 6 2.2275 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0003 15 8 0.3121 -2.5292 0.1094 16 7 2.2208 -3.6414 -0.1210 17 6 1.5214 -4.9285 -0.1218 18 1 0.5529 -4.8843 0.3763 19 6 1.4757 -5.6040 -1.5026 20 6 2.8120 -6.2698 -1.1339 21 1 3.6860 -5.6799 -1.4096 22 6 2.9126 -7.7070 -1.5763 23 6 4.1162 -8.2043 -2.0455 24 9 5.2015 -7.4020 -2.1066 25 6 4.2071 -9.5250 -2.4521 26 6 3.0965 -10.3446 -2.3896 27 6 1.8945 -9.8464 -1.9217 28 6 1.8045 -8.5305 -1.5084 29 6 2.3974 -6.1059 0.3379 30 1 -0.3633 -0.1122 1.0215 31 1 -0.3633 0.9408 -0.4136 32 1 -0.3633 -0.8285 -0.6079 33 1 -0.1549 2.6307 -0.7273 34 1 0.3709 3.4806 1.9985 35 1 -0.8664 5.5405 -0.4611 36 1 1.3585 5.7179 0.5078 37 1 3.0599 4.3906 -0.0011 38 1 4.9967 2.7372 -0.0005 39 1 4.1869 -2.0735 -0.0027 40 1 3.1865 -3.6141 -0.2077 41 1 0.6528 -6.3098 -1.6164 42 1 1.5518 -4.9033 -2.3341 43 1 5.1456 -9.9140 -2.8188 44 1 3.1670 -11.3744 -2.7070 45 1 1.0270 -10.4878 -1.8727 46 1 0.8666 -8.1439 -1.1379 47 1 3.2176 -5.8105 0.9922 48 1 1.8266 -6.9483 0.7285 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:17:54 Heat of formation + Delta-G solvation = 21.622037 kcal Electronic energy + Delta-G solvation = -34050.463879 eV Core-core repulsion = 29374.008791 eV Total energy + Delta-G solvation = -4676.455088 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.148 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -49.81204 -42.84689 -41.55356 -40.37568 -39.09042 -38.44424 -37.80792 -35.15861 -34.52613 -32.16397 -31.86411 -31.47482 -30.70996 -28.80337 -26.80330 -26.71898 -26.19514 -24.72109 -24.06209 -23.64168 -22.66694 -21.92885 -20.71394 -20.22919 -19.34614 -18.87825 -18.56152 -17.72581 -17.51999 -17.42309 -17.12334 -16.84201 -16.60574 -16.55123 -16.42842 -15.93941 -15.71713 -15.49572 -15.40466 -15.22482 -15.08349 -14.69362 -14.64742 -14.17389 -14.06586 -14.01985 -13.77802 -13.66026 -13.54475 -13.54036 -13.22637 -13.12979 -13.03665 -12.89727 -12.44604 -12.42387 -11.94606 -11.81908 -11.78691 -11.27855 -11.18820 -11.02232 -10.47412 -10.20760 -10.09222 -9.91102 -9.59514 -9.57311 -9.13834 -5.00932 -0.22048 -0.04666 0.15913 0.21045 1.22873 1.37263 1.50152 1.60998 1.91648 1.93449 2.06065 2.56096 2.85506 3.24824 3.28375 3.38642 3.38982 3.50855 3.55941 3.59409 3.62781 3.73624 3.76145 3.79847 3.88191 3.99728 4.07826 4.10402 4.22750 4.27514 4.28549 4.32941 4.42737 4.59559 4.64126 4.66144 4.76673 4.81611 4.84260 4.88587 4.95488 5.00512 5.05385 5.07164 5.07784 5.20082 5.21377 5.35511 5.40091 5.42873 5.51661 5.62513 5.78613 5.90449 6.09808 6.44457 6.47625 6.86354 7.25187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C 0.086 3.914 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.067 3.933 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.575 3.425 15 O -0.527 6.527 16 N -0.712 5.712 17 C 0.123 3.877 18 H 0.109 0.891 19 C -0.142 4.142 20 C -0.077 4.077 21 H 0.101 0.899 22 C -0.104 4.104 23 C 0.100 3.900 24 F -0.138 7.138 25 C -0.152 4.152 26 C -0.095 4.095 27 C -0.127 4.127 28 C -0.090 4.090 29 C -0.135 4.135 30 H 0.086 0.914 31 H 0.070 0.930 32 H 0.097 0.903 33 H 0.120 0.880 34 H 0.374 0.626 35 H -0.254 1.254 36 H -0.258 1.258 37 H 0.183 0.817 38 H 0.425 0.575 39 H 0.162 0.838 40 H 0.399 0.601 41 H 0.097 0.903 42 H 0.077 0.923 43 H 0.135 0.865 44 H 0.133 0.867 45 H 0.130 0.870 46 H 0.134 0.866 47 H 0.078 0.922 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.011 0.404 -1.720 2.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.078 3.922 3 C -0.155 4.155 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.331 6.331 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.364 3.636 15 O -0.404 6.404 16 N -0.364 5.364 17 C 0.018 3.982 18 H 0.127 0.873 19 C -0.180 4.180 20 C -0.095 4.095 21 H 0.119 0.881 22 C -0.105 4.105 23 C 0.080 3.920 24 F -0.117 7.117 25 C -0.171 4.171 26 C -0.113 4.113 27 C -0.145 4.145 28 C -0.108 4.108 29 C -0.173 4.173 30 H 0.105 0.895 31 H 0.088 0.912 32 H 0.115 0.885 33 H 0.137 0.863 34 H 0.222 0.778 35 H -0.178 1.178 36 H -0.183 1.183 37 H 0.200 0.800 38 H 0.264 0.736 39 H 0.179 0.821 40 H 0.235 0.765 41 H 0.115 0.885 42 H 0.095 0.905 43 H 0.153 0.847 44 H 0.150 0.850 45 H 0.148 0.852 46 H 0.152 0.848 47 H 0.097 0.903 48 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 1.587 1.064 -1.707 2.562 hybrid contribution 0.775 -0.121 1.057 1.317 sum 2.362 0.943 -0.650 2.625 Atomic orbital electron populations 1.21183 0.88675 1.03759 1.04321 1.19928 0.97175 0.89140 0.85981 1.19453 0.92755 0.93515 1.09826 1.20618 0.95221 0.91038 1.11506 1.24465 0.90935 1.11695 0.88331 1.86638 1.54225 1.75920 1.16365 0.95170 0.82680 0.73614 0.90030 1.21792 0.85117 0.95958 1.03129 1.41512 1.09598 1.02715 1.63665 1.18505 0.89356 0.85885 0.98767 1.66442 1.40558 0.96001 1.18673 1.22505 0.90092 0.94448 0.91708 1.20405 0.94732 0.93682 1.15341 1.17860 0.86825 0.83174 0.75788 1.90761 1.13490 1.86923 1.49211 1.45569 1.10508 1.05097 1.75186 1.21816 0.97366 0.81872 0.97194 0.87273 1.23574 0.96752 0.99641 0.98075 1.21559 0.99424 0.91750 0.96767 0.88059 1.19745 0.92525 0.96606 1.01630 1.17596 0.83401 0.88958 1.02007 1.91492 1.52913 1.73064 1.94229 1.21204 1.00728 0.92382 1.02787 1.21069 0.92084 0.99932 0.98188 1.21254 0.98199 0.95688 0.99338 1.20940 0.97878 0.93304 0.98661 1.23437 1.00133 0.98190 0.95515 0.89550 0.91170 0.88453 0.86268 0.77839 1.17807 1.18274 0.79979 0.73588 0.82138 0.76492 0.88485 0.90472 0.84713 0.84957 0.85173 0.84842 0.90306 0.88156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.36 8.69 36.01 0.31 -0.04 16 2 C 0.09 0.26 5.98 -103.67 -0.62 -0.36 16 3 C -0.15 -0.37 6.16 -105.13 -0.65 -1.01 16 4 C -0.18 -0.02 5.57 -102.73 -0.57 -0.59 16 5 C -0.04 0.02 2.06 36.01 0.07 0.10 16 6 O -0.53 -0.49 12.88 -35.23 -0.45 -0.95 16 7 Si 0.68 -1.45 30.83 -169.99 -5.24 -6.70 16 8 C 0.07 -0.12 10.44 -16.70 -0.17 -0.30 16 9 N -0.57 0.48 6.04 -12.12 -0.07 0.41 16 10 C 0.31 0.69 8.42 -155.71 -1.31 -0.62 16 11 N -0.50 -1.35 10.37 -11.96 -0.12 -1.47 16 12 C 0.18 0.21 10.67 -17.12 -0.18 0.02 16 13 C -0.23 -0.53 5.89 -104.82 -0.62 -1.15 16 14 C 0.58 1.39 7.72 -12.41 -0.10 1.29 16 15 O -0.53 -2.75 13.09 5.30 0.07 -2.69 16 16 N -0.71 0.30 5.21 -54.02 -0.28 0.02 16 17 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 18 H 0.11 0.06 7.46 -51.93 -0.39 -0.32 16 19 C -0.14 0.15 7.25 -25.92 -0.19 -0.04 16 20 C -0.08 0.08 3.78 -90.96 -0.34 -0.27 16 21 H 0.10 -0.08 7.45 -51.93 -0.39 -0.47 16 22 C -0.10 -0.02 5.29 -104.55 -0.55 -0.58 16 23 C 0.10 0.15 7.25 -39.42 -0.29 -0.14 16 24 F -0.14 -0.36 16.36 2.25 0.04 -0.32 16 25 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 26 C -0.09 0.06 10.04 -39.59 -0.40 -0.33 16 27 C -0.13 0.13 10.04 -39.57 -0.40 -0.27 16 28 C -0.09 0.07 8.60 -39.59 -0.34 -0.27 16 29 C -0.13 0.25 7.29 -25.92 -0.19 0.06 16 30 H 0.09 0.33 8.14 -51.93 -0.42 -0.10 16 31 H 0.07 0.13 5.05 -51.93 -0.26 -0.13 16 32 H 0.10 0.37 5.95 -51.93 -0.31 0.07 16 33 H 0.12 -0.07 6.05 -51.93 -0.31 -0.39 16 34 H 0.37 -0.72 8.70 45.56 0.40 -0.32 16 35 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 36 H -0.26 0.27 7.00 56.52 0.40 0.66 16 37 H 0.18 -0.90 6.28 -52.48 -0.33 -1.23 16 38 H 0.43 -1.42 8.96 -40.82 -0.37 -1.79 16 39 H 0.16 -0.36 6.43 -52.49 -0.34 -0.70 16 40 H 0.40 -1.04 6.78 -40.82 -0.28 -1.31 16 41 H 0.10 -0.17 6.33 -51.93 -0.33 -0.50 16 42 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 43 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 45 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 46 H 0.13 -0.35 6.68 -52.49 -0.35 -0.70 16 47 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 48 H 0.10 -0.23 7.72 -51.93 -0.40 -0.63 16 LS Contribution 392.82 15.07 5.92 5.92 Total: 0.00 -9.30 392.82 -12.76 -22.06 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -5.39 Total: -10.96 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -7.22 Total: -5.34 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.48 Total: -1.04 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.38 Total: -3.63 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.24 Total: -6.70 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.30 -12.76 -22.06 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.682 kcal (2) G-P(sol) polarization free energy of solvation -9.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds