Wall clock time and date at job start Mon Mar 8 2021 05:18:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.46969 * 2 1 4 4 C 1.50697 * 109.46737 * 120.00111 * 2 1 3 5 5 C 1.38563 * 120.31976 * 244.99763 * 4 2 1 6 6 N 1.31524 * 120.90112 * 180.02562 * 5 4 2 7 7 C 1.32718 * 121.64240 * 359.97438 * 6 5 4 8 8 C 1.48169 * 119.72414 * 180.02562 * 7 6 5 9 9 O 1.21510 * 120.00426 * 180.02562 * 8 7 6 10 10 N 1.34781 * 119.99829 * 359.97438 * 8 7 6 11 11 C 1.46496 * 119.99931 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.85019 * 336.20254 * 11 10 8 13 13 C 1.53961 * 113.61479 * 107.47169 * 11 10 8 14 14 C 1.53781 * 87.01893 * 89.19587 * 13 11 10 15 15 H 1.08990 * 113.62116 * 270.77347 * 14 13 11 16 16 C 1.50702 * 113.60905 * 139.95022 * 14 13 11 17 17 C 1.38445 * 120.00815 * 140.86523 * 16 14 13 18 18 F 1.35093 * 120.02545 * 359.74916 * 17 16 14 19 19 C 1.38485 * 119.94716 * 180.02562 * 17 16 14 20 20 C 1.38176 * 119.97177 * 359.97438 * 19 17 16 21 21 C 1.38263 * 120.02823 * 0.02562 * 20 19 17 22 22 C 1.38218 * 120.01553 * 320.88671 * 16 14 13 23 23 C 1.53781 * 113.61396 * 205.00435 * 11 10 8 24 24 C 1.39314 * 120.55433 * 0.27592 * 7 6 5 25 25 C 1.38591 * 119.05714 * 359.47864 * 24 7 6 26 26 H 0.96698 * 114.00084 * 300.00005 * 1 2 3 27 27 H 1.08995 * 109.46934 * 240.00232 * 2 1 3 28 28 H 1.48500 * 110.00092 * 300.00089 * 3 2 1 29 29 H 1.48500 * 109.99945 * 61.31877 * 3 2 1 30 30 H 1.07998 * 119.54971 * 0.02562 * 5 4 2 31 31 H 0.96999 * 119.99991 * 0.02562 * 10 8 7 32 32 H 1.09000 * 113.66195 * 334.67043 * 13 11 10 33 33 H 1.08994 * 113.61426 * 203.71945 * 13 11 10 34 34 H 1.08000 * 120.00922 * 179.97438 * 19 17 16 35 35 H 1.08000 * 119.98608 * 180.02562 * 20 19 17 36 36 H 1.08005 * 119.97610 * 180.02562 * 21 20 19 37 37 H 1.07992 * 119.98884 * 359.97438 * 22 16 14 38 38 H 1.09001 * 113.61473 * 156.25380 * 23 11 10 39 39 H 1.08996 * 113.69255 * 25.36297 * 23 11 10 40 40 H 1.07997 * 120.46589 * 179.70483 * 24 7 6 41 41 H 1.07995 * 120.75650 * 180.24308 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6410 -0.0172 2.1977 6 7 3.0851 -0.6259 3.2758 7 6 2.8736 -1.9198 3.4817 8 6 3.3926 -2.5624 4.7118 9 8 3.2023 -3.7468 4.9053 10 7 4.0769 -1.8333 5.6156 11 6 4.5906 -2.4688 6.8315 12 1 4.0401 -3.3694 7.1034 13 6 6.1189 -2.6550 6.8316 14 6 6.2089 -1.2555 7.4625 15 1 6.2706 -0.4498 6.7311 16 6 7.2539 -1.1466 8.5429 17 6 8.0258 -0.0020 8.6466 18 9 7.8462 1.0157 7.7765 19 6 8.9862 0.0966 9.6395 20 6 9.1725 -0.9471 10.5257 21 6 8.4010 -2.0897 10.4211 22 6 7.4424 -2.1894 9.4302 23 6 4.7879 -1.4905 8.0016 24 6 2.1720 -2.6801 2.5487 25 6 1.6877 -2.0638 1.4057 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5878 2.4585 1.2242 30 1 2.8322 1.0374 2.0646 31 1 4.2292 -0.8879 5.4610 32 1 6.5526 -2.7125 5.8332 33 1 6.4614 -3.4535 7.4896 34 1 9.5892 0.9889 9.7211 35 1 9.9211 -0.8703 11.3003 36 1 8.5471 -2.9048 11.1144 37 1 6.8404 -3.0823 9.3495 38 1 4.7659 -1.9702 8.9802 39 1 4.1491 -0.6090 7.9479 40 1 2.0048 -3.7339 2.7155 41 1 1.1369 -2.6261 0.6662 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:26 Heat of formation + Delta-G solvation = -16.597038 kcal Electronic energy + Delta-G solvation = -26528.853808 eV Core-core repulsion = 22483.694846 eV Total energy + Delta-G solvation = -4045.158962 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.80765 -41.98449 -41.24450 -39.99821 -38.76030 -38.05251 -34.80245 -33.71019 -33.00400 -31.79530 -31.44872 -28.05487 -26.81702 -26.27180 -25.09257 -24.22545 -23.61470 -22.69929 -21.98476 -20.21835 -19.37424 -18.78779 -18.61907 -17.80663 -17.43118 -17.10561 -16.69596 -16.67648 -16.54869 -16.47816 -16.16271 -16.07519 -15.42594 -15.28512 -15.10211 -14.80555 -14.52660 -14.44144 -14.26044 -14.08084 -13.89227 -13.56911 -13.52960 -13.10576 -13.04610 -12.73048 -12.44667 -12.16019 -11.96050 -11.81282 -11.35423 -11.26994 -11.12006 -10.80188 -10.66320 -10.38067 -10.08529 -9.90958 -9.58497 -5.11377 -0.60232 0.03152 0.15740 0.20840 1.07227 1.43358 1.59715 1.82377 1.93979 2.55745 2.66344 2.90742 3.15672 3.25350 3.37371 3.39888 3.54954 3.57414 3.63812 3.70087 3.77256 3.86508 3.88448 3.99348 4.09686 4.10432 4.27134 4.32310 4.32728 4.51009 4.56452 4.62304 4.71797 4.82252 4.84238 4.88326 4.92869 4.94339 5.05152 5.06297 5.19924 5.32278 5.35542 5.42311 5.54061 5.90338 6.18713 6.30552 6.60541 7.11397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.148 4.148 5 C 0.102 3.898 6 N -0.453 5.453 7 C 0.081 3.919 8 C 0.576 3.424 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.109 0.891 13 C -0.141 4.141 14 C -0.076 4.076 15 H 0.103 0.897 16 C -0.104 4.104 17 C 0.100 3.900 18 F -0.138 7.138 19 C -0.152 4.152 20 C -0.095 4.095 21 C -0.127 4.127 22 C -0.090 4.090 23 C -0.134 4.134 24 C -0.108 4.108 25 C -0.052 4.052 26 H 0.378 0.622 27 H 0.125 0.875 28 H -0.251 1.251 29 H -0.255 1.255 30 H 0.165 0.835 31 H 0.413 0.587 32 H 0.077 0.923 33 H 0.098 0.902 34 H 0.135 0.865 35 H 0.133 0.867 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.101 0.899 39 H 0.079 0.921 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.076 1.052 0.812 2.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.586 3.414 4 C -0.150 4.150 5 C -0.057 4.057 6 N -0.164 5.164 7 C -0.057 4.057 8 C 0.361 3.639 9 O -0.402 6.402 10 N -0.345 5.345 11 C 0.013 3.987 12 H 0.127 0.873 13 C -0.179 4.179 14 C -0.095 4.095 15 H 0.121 0.879 16 C -0.105 4.105 17 C 0.081 3.919 18 F -0.116 7.116 19 C -0.171 4.171 20 C -0.113 4.113 21 C -0.145 4.145 22 C -0.108 4.108 23 C -0.172 4.172 24 C -0.128 4.128 25 C -0.078 4.078 26 H 0.226 0.774 27 H 0.143 0.857 28 H -0.176 1.176 29 H -0.179 1.179 30 H 0.181 0.819 31 H 0.250 0.750 32 H 0.096 0.904 33 H 0.116 0.884 34 H 0.153 0.847 35 H 0.151 0.849 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.119 0.881 39 H 0.098 0.902 40 H 0.171 0.829 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.279 1.210 1.034 2.780 hybrid contribution -1.349 0.117 -0.323 1.392 sum 0.930 1.326 0.711 1.769 Atomic orbital electron populations 1.86641 1.17177 1.79976 1.49392 1.25016 0.84286 1.11351 0.97749 0.94960 0.91438 0.73995 0.80958 1.21587 0.99525 0.95767 0.98153 1.22683 0.94151 1.00050 0.88861 1.67532 1.18142 1.09442 1.21277 1.21149 0.98575 0.90294 0.95713 1.17843 0.77866 0.85931 0.82261 1.90817 1.57987 1.14738 1.76625 1.45500 1.54891 1.13828 1.20245 1.21936 0.94926 0.97474 0.84399 0.87294 1.23593 0.95902 0.96310 1.02127 1.21558 0.92893 0.99213 0.95791 0.87924 1.19747 0.98344 0.93582 0.98852 1.17599 0.98047 0.85670 0.90585 1.91492 1.94572 1.57893 1.67683 1.21207 0.98998 1.01064 0.95831 1.21068 0.99120 0.92757 0.98318 1.21251 0.96155 0.98381 0.98711 1.20931 0.97920 0.97973 0.93971 1.23426 0.95405 0.99983 0.98357 1.22231 0.95324 1.02316 0.92956 1.21567 0.95766 0.93734 0.96756 0.77423 0.85709 1.17563 1.17937 0.81871 0.75041 0.90441 0.88403 0.84688 0.84949 0.85172 0.84875 0.88093 0.90214 0.82931 0.83436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.22 12.84 -35.23 -0.45 -0.24 16 2 C -0.07 0.15 2.82 36.00 0.10 0.25 16 3 Si 0.69 -1.76 29.91 -169.99 -5.08 -6.84 16 4 C -0.15 0.18 5.37 -104.36 -0.56 -0.38 16 5 C 0.10 -0.08 9.84 -17.56 -0.17 -0.25 16 6 N -0.45 -0.42 9.54 -9.80 -0.09 -0.51 16 7 C 0.08 0.14 6.75 -83.01 -0.56 -0.42 16 8 C 0.58 1.59 7.81 -12.18 -0.10 1.50 16 9 O -0.53 -2.91 15.92 5.36 0.09 -2.83 16 10 N -0.69 -0.41 5.25 -53.77 -0.28 -0.69 16 11 C 0.12 -0.03 4.33 -67.03 -0.29 -0.32 16 12 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 13 C -0.14 0.10 7.27 -25.82 -0.19 -0.08 16 14 C -0.08 0.04 3.79 -90.96 -0.34 -0.30 16 15 H 0.10 -0.01 7.43 -51.93 -0.39 -0.39 16 16 C -0.10 -0.04 5.29 -104.55 -0.55 -0.59 16 17 C 0.10 0.16 7.25 -39.41 -0.29 -0.12 16 18 F -0.14 -0.38 16.35 2.25 0.04 -0.34 16 19 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 20 C -0.09 0.06 10.04 -39.60 -0.40 -0.33 16 21 C -0.13 0.13 10.04 -39.58 -0.40 -0.27 16 22 C -0.09 0.07 8.54 -39.59 -0.34 -0.27 16 23 C -0.13 0.19 7.29 -25.92 -0.19 0.00 16 24 C -0.11 -0.08 9.63 -39.05 -0.38 -0.45 16 25 C -0.05 0.04 9.83 -39.31 -0.39 -0.35 16 26 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 27 H 0.13 -0.36 7.96 -51.93 -0.41 -0.78 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 29 H -0.25 0.21 7.01 56.52 0.40 0.60 16 30 H 0.16 -0.46 4.86 -52.49 -0.25 -0.72 16 31 H 0.41 -0.19 8.03 -40.82 -0.33 -0.52 16 32 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.10 -0.17 6.39 -51.93 -0.33 -0.50 16 34 H 0.14 -0.11 8.06 -52.49 -0.42 -0.54 16 35 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 36 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 37 H 0.13 -0.35 6.73 -52.49 -0.35 -0.70 16 38 H 0.10 -0.22 7.64 -51.93 -0.40 -0.62 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.15 0.05 7.64 -52.49 -0.40 -0.35 16 41 H 0.15 -0.31 8.06 -52.49 -0.42 -0.73 16 LS Contribution 351.21 15.07 5.29 5.29 Total: 0.00 -7.17 351.21 -10.52 -17.70 By element: Atomic # 1 Polarization: -4.07 SS G_CDS: -4.60 Total: -8.67 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -5.43 Total: -2.87 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -0.38 Total: -1.21 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -0.37 Total: -3.06 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.08 Total: -6.84 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -7.17 -10.52 -17.70 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.100 kcal (2) G-P(sol) polarization free energy of solvation -7.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds