Wall clock time and date at job start Mon Mar 8 2021 05:19:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37795 * 119.84434 * 2 1 4 4 C 1.39702 * 119.90452 * 180.02562 * 3 2 1 5 5 C 1.47536 * 120.19178 * 179.97438 * 4 3 2 6 6 O 1.21585 * 120.00239 * 179.97438 * 5 4 3 7 7 N 1.34778 * 119.99640 * 359.97438 * 5 4 3 8 8 C 1.46500 * 119.99682 * 180.02562 * 7 5 4 9 9 H 1.08998 * 112.85520 * 336.19878 * 8 7 5 10 10 C 1.53786 * 113.61307 * 107.50752 * 8 7 5 11 11 C 1.53783 * 87.08132 * 89.11555 * 10 8 7 12 12 H 1.08998 * 113.68752 * 270.87736 * 11 10 8 13 13 C 1.50694 * 113.61446 * 139.97785 * 11 10 8 14 14 C 1.38445 * 120.01153 * 142.50193 * 13 11 10 15 15 F 1.35099 * 120.02142 * 359.75084 * 14 13 11 16 16 C 1.38479 * 119.94912 * 179.72597 * 14 13 11 17 17 C 1.38172 * 119.97341 * 0.02562 * 16 14 13 18 18 C 1.38267 * 120.02673 * 359.97438 * 17 16 14 19 19 C 1.38215 * 120.01777 * 322.23210 * 13 11 10 20 20 C 1.53782 * 113.61326 * 205.00535 * 8 7 5 21 21 C 1.40137 * 119.61903 * 0.24477 * 4 3 2 22 22 O 1.35655 * 120.14967 * 179.72562 * 21 4 3 23 23 C 1.38714 * 119.69866 * 359.50571 * 21 4 3 24 24 C 1.50699 * 119.95991 * 180.22759 * 23 21 4 25 25 O 1.42898 * 109.46855 * 285.27525 * 24 23 21 26 26 Si 1.86293 * 109.47424 * 165.27462 * 24 23 21 27 27 C 1.38047 * 120.08130 * 0.50003 * 23 21 4 28 28 H 1.08999 * 109.47148 * 90.00215 * 1 2 3 29 29 H 1.09003 * 109.46897 * 209.99790 * 1 2 3 30 30 H 1.08992 * 109.47548 * 329.99982 * 1 2 3 31 31 H 1.07998 * 120.04410 * 0.03964 * 3 2 1 32 32 H 0.96997 * 120.00514 * 0.02562 * 7 5 4 33 33 H 1.09003 * 113.61212 * 334.56847 * 10 8 7 34 34 H 1.08997 * 113.61181 * 203.66300 * 10 8 7 35 35 H 1.08003 * 120.00946 * 180.02562 * 16 14 13 36 36 H 1.08003 * 119.98375 * 179.97438 * 17 16 14 37 37 H 1.08008 * 119.97189 * 179.97438 * 18 17 16 38 38 H 1.08001 * 119.98427 * 0.26811 * 19 13 11 39 39 H 1.09004 * 113.61712 * 156.34032 * 20 8 7 40 40 H 1.09001 * 113.69229 * 25.44167 * 20 8 7 41 41 H 0.96699 * 113.99892 * 90.00711 * 22 21 4 42 42 H 1.09001 * 109.47181 * 45.27105 * 24 23 21 43 43 H 0.96695 * 114.00091 * 299.99522 * 25 24 23 44 44 H 1.48503 * 109.99876 * 58.67685 * 26 24 23 45 45 H 1.48502 * 110.00249 * 180.02562 * 26 24 23 46 46 H 1.08007 * 119.80459 * 179.72816 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1927 1.1952 0.0000 4 6 3.5898 1.1967 -0.0005 5 6 4.3304 2.4727 -0.0011 6 8 5.5462 2.4699 -0.0011 7 7 3.6591 3.6414 -0.0016 8 6 4.3945 4.9084 -0.0028 9 1 5.4020 4.8135 0.4022 10 6 4.3366 5.6531 -1.3471 11 6 3.0597 6.3333 -0.8257 12 1 2.1469 5.7811 -1.0493 13 6 2.9636 7.7935 -1.1856 14 6 1.7382 8.3455 -1.5181 15 9 0.6290 7.5743 -1.5249 16 6 1.6505 9.6887 -1.8431 17 6 2.7857 10.4763 -1.8357 18 6 4.0089 9.9239 -1.5036 19 6 4.0977 8.5835 -1.1786 20 6 3.5995 6.0826 0.5924 21 6 4.2836 -0.0208 -0.0063 22 8 5.6401 -0.0320 -0.0125 23 6 3.5771 -1.2146 -0.0010 24 6 4.3173 -2.5272 -0.0019 25 8 4.8546 -2.7701 -1.3036 26 14 3.1448 -3.9018 0.4522 27 6 2.1967 -1.2016 -0.0005 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3634 0.8899 0.5138 31 1 1.6509 2.1294 0.0006 32 1 2.6891 3.6436 -0.0013 33 1 4.1648 4.9986 -2.2017 34 1 5.1669 6.3423 -1.5005 35 1 0.6950 10.1205 -2.1022 36 1 2.7175 11.5239 -2.0896 37 1 4.8958 10.5403 -1.4985 38 1 5.0537 8.1531 -0.9192 39 1 4.2283 6.8894 0.9690 40 1 2.8325 5.7764 1.3037 41 1 6.0374 -0.0372 0.8691 42 1 5.1290 -2.4871 0.7245 43 1 4.1874 -2.8183 -2.0018 44 1 2.0166 -3.9464 -0.5124 45 1 3.8628 -5.2017 0.4555 46 1 1.6511 -2.1337 -0.0008 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:04 Heat of formation + Delta-G solvation = -71.021911 kcal Electronic energy + Delta-G solvation = -31213.013283 eV Core-core repulsion = 26756.700382 eV Total energy + Delta-G solvation = -4456.312901 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -49.85069 -41.90009 -41.15258 -39.87374 -38.69744 -37.99891 -37.64144 -34.69879 -33.13143 -32.89091 -31.65717 -31.44024 -27.69519 -26.86566 -26.83708 -26.59601 -25.04130 -23.76066 -22.74716 -22.04908 -21.58808 -20.26602 -19.56523 -18.84662 -18.39106 -17.92807 -17.51394 -17.37980 -17.01184 -16.77241 -16.58573 -16.55480 -16.05411 -15.88856 -15.67745 -15.35242 -15.29240 -15.13481 -14.86198 -14.66462 -14.57756 -14.24374 -14.13954 -13.93290 -13.65087 -13.59449 -13.42359 -13.12810 -13.08478 -13.06918 -12.61023 -12.46330 -12.24487 -11.99380 -11.82662 -11.78337 -11.69796 -11.31267 -10.89358 -10.49326 -10.22604 -10.06108 -9.93259 -9.61644 -9.54849 -5.03880 -0.35800 0.03443 0.12863 0.18211 1.19552 1.49563 1.75018 1.89418 2.02280 2.52766 2.56727 3.16280 3.21937 3.30099 3.34609 3.46524 3.51752 3.53189 3.60909 3.64340 3.74222 3.84744 3.96802 4.02605 4.04126 4.08487 4.24096 4.25493 4.30013 4.42045 4.51905 4.54923 4.56550 4.60514 4.67601 4.75123 4.79623 4.85439 4.89272 4.92354 4.94856 5.01582 5.03429 5.15100 5.17272 5.28849 5.32775 5.40107 5.52992 5.56616 5.87475 6.41798 6.43449 6.76316 7.21766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.563 3.437 6 O -0.514 6.514 7 N -0.712 5.712 8 C 0.123 3.877 9 H 0.109 0.891 10 C -0.142 4.142 11 C -0.076 4.076 12 H 0.100 0.900 13 C -0.105 4.105 14 C 0.099 3.901 15 F -0.139 7.139 16 C -0.152 4.152 17 C -0.094 4.094 18 C -0.126 4.126 19 C -0.090 4.090 20 C -0.134 4.134 21 C 0.192 3.808 22 O -0.467 6.467 23 C -0.151 4.151 24 C -0.065 4.065 25 O -0.519 6.519 26 Si 0.688 3.312 27 C -0.081 4.081 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.131 0.869 32 H 0.399 0.601 33 H 0.076 0.924 34 H 0.097 0.903 35 H 0.135 0.865 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.134 0.866 39 H 0.100 0.900 40 H 0.078 0.922 41 H 0.394 0.606 42 H 0.116 0.884 43 H 0.374 0.626 44 H -0.259 1.259 45 H -0.255 1.255 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.644 2.278 3.552 6.274 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.085 4.085 4 C -0.168 4.168 5 C 0.350 3.650 6 O -0.390 6.390 7 N -0.365 5.365 8 C 0.017 3.983 9 H 0.127 0.873 10 C -0.181 4.181 11 C -0.094 4.094 12 H 0.118 0.882 13 C -0.105 4.105 14 C 0.080 3.920 15 F -0.117 7.117 16 C -0.171 4.171 17 C -0.112 4.112 18 C -0.144 4.144 19 C -0.108 4.108 20 C -0.172 4.172 21 C 0.145 3.855 22 O -0.278 6.278 23 C -0.152 4.152 24 C -0.175 4.175 25 O -0.325 6.325 26 Si 0.589 3.411 27 C -0.099 4.099 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.148 0.852 32 H 0.235 0.765 33 H 0.095 0.905 34 H 0.116 0.884 35 H 0.153 0.847 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.152 0.848 39 H 0.119 0.881 40 H 0.097 0.903 41 H 0.253 0.747 42 H 0.134 0.866 43 H 0.221 0.779 44 H -0.184 1.184 45 H -0.180 1.180 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -3.650 1.493 3.041 4.980 hybrid contribution -0.680 0.340 -0.861 1.149 sum -4.331 1.833 2.180 5.183 Atomic orbital electron populations 1.20841 0.90022 1.03572 1.02959 1.19791 0.96764 0.92253 1.00871 1.21135 0.92145 0.98312 0.96957 1.20362 0.93914 0.93405 1.09141 1.18020 0.87308 0.83229 0.76421 1.90839 1.12957 1.87190 1.48002 1.45589 1.10007 1.04915 1.75960 1.21819 0.97303 0.82260 0.96906 0.87341 1.23576 0.97261 0.99178 0.98084 1.21547 0.99458 0.91313 0.97125 0.88162 1.19736 0.92118 0.96349 1.02337 1.17592 0.82517 0.89226 1.02652 1.91486 1.51095 1.74990 1.94168 1.21203 1.00607 0.92251 1.03011 1.21074 0.91839 1.00136 0.98192 1.21258 0.98166 0.95229 0.99784 1.20940 0.97810 0.93478 0.98558 1.23436 1.00067 0.97894 0.95780 1.18221 0.83959 0.89644 0.93685 1.84809 1.13997 1.95863 1.33116 1.20651 0.93970 0.95754 1.04809 1.24907 1.05082 0.98832 0.88705 1.86681 1.36478 1.93256 1.16056 0.95129 0.77924 0.77673 0.90326 1.21174 0.92912 0.98555 0.97229 0.90720 0.90877 0.90965 0.85172 0.76513 0.90536 0.88439 0.84686 0.84919 0.85136 0.84849 0.88120 0.90337 0.74708 0.86573 0.77912 1.18383 1.17951 0.84618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.39 10.00 36.01 0.36 0.75 16 2 C -0.10 0.13 5.87 -104.67 -0.61 -0.48 16 3 C -0.07 0.07 9.18 -39.20 -0.36 -0.29 16 4 C -0.16 -0.24 5.89 -104.85 -0.62 -0.86 16 5 C 0.56 1.53 7.76 -12.47 -0.10 1.44 16 6 O -0.51 -3.23 14.76 -16.59 -0.24 -3.48 16 7 N -0.71 0.17 5.21 -54.05 -0.28 -0.12 16 8 C 0.12 -0.05 4.32 -67.11 -0.29 -0.34 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 10 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 11 C -0.08 0.07 3.78 -90.96 -0.34 -0.27 16 12 H 0.10 -0.08 7.45 -51.93 -0.39 -0.46 16 13 C -0.10 -0.02 5.29 -104.56 -0.55 -0.58 16 14 C 0.10 0.14 7.25 -39.42 -0.29 -0.15 16 15 F -0.14 -0.33 16.36 2.25 0.04 -0.29 16 16 C -0.15 -0.05 10.03 -39.52 -0.40 -0.45 16 17 C -0.09 0.07 10.04 -39.60 -0.40 -0.33 16 18 C -0.13 0.13 10.04 -39.58 -0.40 -0.27 16 19 C -0.09 0.07 8.60 -39.60 -0.34 -0.27 16 20 C -0.13 0.25 7.29 -25.91 -0.19 0.06 16 21 C 0.19 0.42 6.69 -38.69 -0.26 0.17 16 22 O -0.47 -1.62 10.91 -40.54 -0.44 -2.06 16 23 C -0.15 -0.07 5.27 -104.52 -0.55 -0.62 16 24 C -0.07 -0.01 2.37 36.01 0.09 0.07 16 25 O -0.52 -1.30 12.88 -35.23 -0.45 -1.75 16 26 Si 0.69 -0.92 30.24 -169.99 -5.14 -6.06 16 27 C -0.08 0.08 8.30 -39.54 -0.33 -0.25 16 28 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 30 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 31 H 0.13 -0.46 6.40 -52.49 -0.34 -0.80 16 32 H 0.40 -1.01 6.73 -40.82 -0.27 -1.29 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.10 -0.13 6.32 -51.93 -0.33 -0.46 16 35 H 0.14 -0.13 8.06 -52.48 -0.42 -0.56 16 36 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 37 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 38 H 0.13 -0.33 6.67 -52.49 -0.35 -0.68 16 39 H 0.10 -0.24 7.71 -51.93 -0.40 -0.64 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 41 H 0.39 -0.12 9.06 45.56 0.41 0.29 16 42 H 0.12 -0.06 7.84 -51.93 -0.41 -0.47 16 43 H 0.37 -0.18 8.70 45.56 0.40 0.22 16 44 H -0.26 -0.01 6.68 56.52 0.38 0.37 16 45 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 46 H 0.14 -0.33 4.83 -52.48 -0.25 -0.58 16 LS Contribution 383.34 15.07 5.78 5.78 Total: 0.00 -9.47 383.34 -11.42 -20.90 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -4.91 Total: -10.15 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: -5.76 Total: -2.77 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.12 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: -1.14 Total: -7.29 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.14 Total: -6.06 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.47 -11.42 -20.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.123 kcal (2) G-P(sol) polarization free energy of solvation -9.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds