Wall clock time and date at job start Mon Mar 8 2021 05:19:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86294 * 109.47076 * 2 1 4 4 C 1.50697 * 109.46916 * 120.00535 * 2 1 3 5 5 C 1.34173 * 125.44448 * 65.31137 * 4 2 1 6 6 C 1.47020 * 105.95901 * 180.14348 * 5 4 2 7 7 C 1.47374 * 127.19756 * 179.83141 * 6 5 4 8 8 O 1.21619 * 119.99625 * 359.71214 * 7 6 5 9 9 N 1.34774 * 120.00556 * 179.70837 * 7 6 5 10 10 C 1.46496 * 120.00099 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.91109 * 23.75176 * 10 9 7 12 12 C 1.53787 * 113.61210 * 155.00440 * 10 9 7 13 13 C 1.53778 * 87.08035 * 89.11438 * 12 10 9 14 14 H 1.09004 * 113.61682 * 270.87724 * 13 12 10 15 15 C 1.50698 * 113.61154 * 139.98353 * 13 12 10 16 16 C 1.38436 * 120.01454 * 119.99840 * 15 13 12 17 17 F 1.35099 * 120.02805 * 359.97438 * 16 15 13 18 18 C 1.38491 * 119.94749 * 180.02562 * 16 15 13 19 19 C 1.38173 * 119.97570 * 359.97438 * 18 16 15 20 20 C 1.38270 * 120.02434 * 0.02562 * 19 18 16 21 21 C 1.38224 * 120.01158 * 299.72383 * 15 13 12 22 22 C 1.53778 * 87.08449 * 25.43264 * 13 12 10 23 23 C 1.36422 * 105.61059 * 359.56967 * 6 5 4 24 24 O 1.33648 * 108.39752 * 0.26578 * 23 6 5 25 25 H 0.96696 * 114.00195 * 59.99942 * 1 2 3 26 26 H 1.09008 * 109.46963 * 239.99990 * 2 1 3 27 27 H 1.48499 * 110.00203 * 60.00356 * 3 2 1 28 28 H 1.48503 * 110.00034 * 181.31782 * 3 2 1 29 29 H 1.08005 * 127.02184 * 359.97438 * 5 4 2 30 30 H 0.97002 * 119.99411 * 0.02562 * 9 7 6 31 31 H 1.08998 * 113.61103 * 203.66698 * 12 10 9 32 32 H 1.08999 * 113.61167 * 334.56160 * 12 10 9 33 33 H 1.08002 * 120.00851 * 179.97438 * 18 16 15 34 34 H 1.08003 * 119.98730 * 179.97438 * 19 18 16 35 35 H 1.07997 * 119.97205 * 180.02562 * 20 19 18 36 36 H 1.07990 * 119.98803 * 359.97438 * 21 15 13 37 37 H 1.08993 * 113.61229 * 220.02023 * 22 13 12 38 38 H 1.09000 * 113.61263 * 89.11673 * 22 13 12 39 39 H 1.07996 * 125.79756 * 180.26021 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7602 -2.0135 1.5008 6 6 2.4122 -2.2463 2.7978 7 6 2.4998 -3.5192 3.5353 8 8 1.9925 -4.5244 3.0756 9 7 3.1421 -3.5694 4.7191 10 6 3.2296 -4.8349 5.4518 11 1 3.1265 -5.7070 4.8063 12 6 4.4340 -4.9129 6.4049 13 6 3.5246 -4.2925 7.4786 14 1 3.5401 -3.2026 7.4875 15 6 3.7113 -4.8929 8.8481 16 6 4.1083 -4.0936 9.9064 17 9 4.3292 -2.7751 9.7120 18 6 4.2800 -4.6470 11.1643 19 6 4.0544 -5.9958 11.3618 20 6 3.6579 -6.7931 10.3041 21 6 3.4807 -6.2409 9.0494 22 6 2.3365 -4.8854 6.7028 23 6 2.9244 -1.0388 3.1731 24 8 2.6268 -0.1422 2.2277 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 -0.8901 27 1 1.5616 2.4678 1.2085 28 1 3.5346 1.7703 -0.0321 29 1 1.2458 -2.7421 0.8915 30 1 3.5465 -2.7676 5.0858 31 1 4.7455 -5.9323 6.6323 32 1 5.2647 -4.2708 6.1121 33 1 4.5902 -4.0244 11.9905 34 1 4.1886 -6.4275 12.3427 35 1 3.4813 -7.8471 10.4595 36 1 3.1663 -6.8636 8.2251 37 1 1.4740 -4.2211 6.6506 38 1 2.0746 -5.8973 7.0118 39 1 3.4765 -0.8412 4.0800 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:24 Heat of formation + Delta-G solvation = -34.924600 kcal Electronic energy + Delta-G solvation = -25288.092003 eV Core-core repulsion = 21272.645777 eV Total energy + Delta-G solvation = -4015.446226 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.110 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -49.86093 -43.75359 -41.52890 -40.08414 -38.72055 -37.97398 -34.77402 -33.86344 -32.25072 -31.58556 -31.40937 -26.98600 -26.86435 -26.36205 -24.93850 -23.73362 -22.70285 -22.23347 -21.05083 -20.28791 -18.99365 -18.73951 -18.70558 -17.59860 -17.37979 -17.19292 -16.98654 -16.80673 -16.58923 -16.05277 -15.87254 -15.80002 -15.31950 -15.19392 -15.10972 -14.55418 -14.17467 -14.15645 -14.12143 -13.95854 -13.72541 -13.60294 -13.14182 -13.09207 -12.72927 -12.47159 -12.10277 -12.01257 -11.85475 -11.34094 -11.06646 -10.88773 -10.56028 -10.17060 -9.95350 -9.81708 -9.62670 -5.13893 0.11717 0.17258 0.19247 0.86202 1.09371 1.52995 1.63517 1.96576 1.96850 2.31238 2.52283 3.19236 3.20953 3.32789 3.49541 3.51033 3.55118 3.58585 3.71959 3.81922 3.83972 3.95784 4.04052 4.15370 4.23218 4.28909 4.33568 4.53352 4.57134 4.58848 4.71098 4.75884 4.79265 4.84419 4.90300 4.99960 5.02461 5.15815 5.20450 5.31237 5.39099 5.50842 5.81847 5.86513 6.38999 6.43588 7.16969 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.712 3.288 4 C -0.016 4.016 5 C -0.117 4.117 6 C -0.236 4.236 7 C 0.593 3.407 8 O -0.527 6.527 9 N -0.711 5.711 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.134 4.134 13 C -0.076 4.076 14 H 0.100 0.900 15 C -0.105 4.105 16 C 0.099 3.901 17 F -0.139 7.139 18 C -0.152 4.152 19 C -0.094 4.094 20 C -0.126 4.126 21 C -0.090 4.090 22 C -0.142 4.142 23 C 0.032 3.968 24 O -0.173 6.173 25 H 0.391 0.609 26 H 0.096 0.904 27 H -0.249 1.249 28 H -0.253 1.253 29 H 0.165 0.835 30 H 0.399 0.601 31 H 0.101 0.899 32 H 0.078 0.922 33 H 0.135 0.865 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.134 0.866 37 H 0.077 0.923 38 H 0.098 0.902 39 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.493 1.548 -0.868 2.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.146 4.146 3 Si 0.611 3.389 4 C -0.063 4.063 5 C -0.136 4.136 6 C -0.240 4.240 7 C 0.381 3.619 8 O -0.404 6.404 9 N -0.363 5.363 10 C 0.017 3.983 11 H 0.128 0.872 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.119 0.881 15 C -0.106 4.106 16 C 0.080 3.920 17 F -0.117 7.117 18 C -0.171 4.171 19 C -0.112 4.112 20 C -0.144 4.144 21 C -0.108 4.108 22 C -0.181 4.181 23 C -0.039 4.039 24 O -0.069 6.069 25 H 0.240 0.760 26 H 0.114 0.886 27 H -0.173 1.173 28 H -0.177 1.177 29 H 0.182 0.818 30 H 0.233 0.767 31 H 0.120 0.880 32 H 0.097 0.903 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.149 0.851 36 H 0.152 0.848 37 H 0.095 0.905 38 H 0.116 0.884 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 1.771 1.447 -0.259 2.302 hybrid contribution 0.290 -0.091 0.669 0.735 sum 2.061 1.355 0.411 2.501 Atomic orbital electron populations 1.86474 1.16317 1.82033 1.50237 1.23826 0.86239 1.11810 0.92708 0.95130 0.80816 0.76043 0.86922 1.21180 1.01421 0.92162 0.91582 1.22503 1.00634 0.95271 0.95218 1.21493 1.09135 0.94241 0.99151 1.17208 0.77689 0.87048 0.79987 1.90819 1.46107 1.35559 1.67873 1.45495 1.57653 1.11975 1.21153 1.21840 0.96409 0.87552 0.92540 0.87231 1.23435 0.96631 1.02786 0.94298 1.21550 0.97783 1.00271 0.89861 0.88150 1.19730 1.02163 0.94201 0.94482 1.17595 1.02135 0.77945 0.94311 1.91486 1.92335 1.32122 1.95806 1.21209 1.03280 0.96617 0.95966 1.21078 0.97773 0.92695 0.99670 1.21261 0.99918 1.00534 0.92716 1.20944 0.98559 0.93525 0.97754 1.23583 0.97061 1.02539 0.94914 1.24481 0.99684 0.86834 0.92878 1.83705 1.57558 1.39137 1.26549 0.75983 0.88620 1.17344 1.17729 0.81776 0.76685 0.88043 0.90325 0.84674 0.84899 0.85118 0.84831 0.90469 0.88357 0.76965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.12 12.86 -35.23 -0.45 -0.33 16 2 C -0.04 0.02 2.96 36.00 0.11 0.12 16 3 Si 0.71 -0.99 32.09 -169.99 -5.46 -6.45 16 4 C -0.02 -0.04 6.22 -35.74 -0.22 -0.26 16 5 C -0.12 -0.41 10.90 -37.46 -0.41 -0.81 16 6 C -0.24 -0.63 6.31 -103.28 -0.65 -1.28 16 7 C 0.59 2.04 7.81 -12.54 -0.10 1.94 16 8 O -0.53 -3.88 16.58 5.26 0.09 -3.79 16 9 N -0.71 0.00 5.25 -54.11 -0.28 -0.28 16 10 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 11 H 0.11 0.13 7.47 -51.93 -0.39 -0.26 16 12 C -0.13 0.23 7.29 -25.92 -0.19 0.04 16 13 C -0.08 0.06 3.78 -90.96 -0.34 -0.28 16 14 H 0.10 -0.08 7.45 -51.93 -0.39 -0.46 16 15 C -0.10 -0.04 5.29 -104.55 -0.55 -0.59 16 16 C 0.10 0.15 7.25 -39.42 -0.29 -0.13 16 17 F -0.14 -0.36 16.37 2.25 0.04 -0.32 16 18 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 19 C -0.09 0.06 10.04 -39.59 -0.40 -0.34 16 20 C -0.13 0.12 10.04 -39.57 -0.40 -0.28 16 21 C -0.09 0.06 8.62 -39.59 -0.34 -0.28 16 22 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 23 C 0.03 0.01 11.61 30.08 0.35 0.36 16 24 O -0.17 -0.44 8.90 7.65 0.07 -0.37 16 25 H 0.39 -2.27 8.74 45.56 0.40 -1.87 16 26 H 0.10 -0.26 7.96 -51.92 -0.41 -0.68 16 27 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 28 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 29 H 0.16 0.53 8.06 -52.48 -0.42 0.11 16 30 H 0.40 -1.10 7.67 -40.82 -0.31 -1.42 16 31 H 0.10 -0.22 7.73 -51.93 -0.40 -0.63 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.14 -0.11 8.06 -52.49 -0.42 -0.54 16 34 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 35 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 36 H 0.13 -0.33 6.64 -52.49 -0.35 -0.68 16 37 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.10 -0.14 6.30 -51.93 -0.33 -0.47 16 39 H 0.21 -0.93 7.47 -52.49 -0.39 -1.32 16 LS Contribution 341.96 15.07 5.15 5.15 Total: 0.00 -10.48 341.96 -9.46 -19.94 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -4.31 Total: -10.87 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -4.31 Total: -2.68 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.28 Total: -0.28 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -0.30 Total: -4.49 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.46 Total: -6.45 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -10.48 -9.46 -19.94 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.987 kcal (2) G-P(sol) polarization free energy of solvation -10.477 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds