Wall clock time and date at job start Mon Mar 8 2021 05:20:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46818 * 2 1 4 4 C 1.50696 * 109.47210 * 240.00035 * 2 1 3 5 5 C 1.38270 * 119.94382 * 300.00262 * 4 2 1 6 6 C 1.38143 * 120.05378 * 180.02562 * 5 4 2 7 7 C 1.38735 * 119.94455 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05503 * 179.72940 * 7 6 5 9 9 C 1.42895 * 117.00049 * 179.97438 * 8 7 6 10 10 F 1.39898 * 109.47379 * 299.99688 * 9 8 7 11 11 F 1.39904 * 109.47169 * 59.99724 * 9 8 7 12 12 C 1.50700 * 109.47241 * 179.97438 * 9 8 7 13 13 O 1.21275 * 120.00072 * 359.97438 * 12 9 8 14 14 N 1.34777 * 120.00079 * 180.02562 * 12 9 8 15 15 C 1.46500 * 119.99928 * 179.97438 * 14 12 9 16 16 H 1.08997 * 112.85190 * 25.33063 * 15 14 12 17 17 C 1.53787 * 113.61453 * 156.52631 * 15 14 12 18 18 C 1.53775 * 87.08008 * 89.11446 * 17 15 14 19 19 H 1.08999 * 113.61783 * 270.88106 * 18 17 15 20 20 C 1.50703 * 113.61275 * 139.98063 * 18 17 15 21 21 C 1.38435 * 120.01280 * 120.00116 * 20 18 17 22 22 F 1.35106 * 120.02580 * 359.97438 * 21 20 18 23 23 C 1.38480 * 119.95114 * 180.02562 * 21 20 18 24 24 C 1.38179 * 119.97328 * 0.02562 * 23 21 20 25 25 C 1.38265 * 120.02266 * 359.97438 * 24 23 21 26 26 C 1.38215 * 120.01311 * 299.72705 * 20 18 17 27 27 C 1.53782 * 113.61623 * 254.13148 * 15 14 12 28 28 C 1.38726 * 119.88971 * 359.97438 * 7 6 5 29 29 C 1.38146 * 119.94298 * 359.97438 * 28 7 6 30 30 H 0.96702 * 114.00365 * 60.00000 * 1 2 3 31 31 H 1.08999 * 109.47038 * 120.00196 * 2 1 3 32 32 H 1.48502 * 110.00013 * 60.00201 * 3 2 1 33 33 H 1.48500 * 109.99684 * 181.31820 * 3 2 1 34 34 H 1.07992 * 119.97181 * 0.02562 * 5 4 2 35 35 H 1.08000 * 120.02872 * 180.02562 * 6 5 4 36 36 H 0.96994 * 120.00005 * 359.97438 * 14 12 9 37 37 H 1.08996 * 113.61350 * 203.66779 * 17 15 14 38 38 H 1.09000 * 113.61343 * 334.56638 * 17 15 14 39 39 H 1.07997 * 120.01539 * 179.97438 * 23 21 20 40 40 H 1.08001 * 119.98861 * 179.97438 * 24 23 21 41 41 H 1.08004 * 119.97160 * 179.97438 * 25 24 23 42 42 H 1.07999 * 119.98690 * 359.97438 * 26 20 18 43 43 H 1.09001 * 113.60815 * 25.43225 * 27 15 14 44 44 H 1.09003 * 113.61642 * 156.33418 * 27 15 14 45 45 H 1.07998 * 120.02970 * 179.97438 * 28 7 6 46 46 H 1.08004 * 119.96754 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5966 -2.0342 -1.4481 6 6 2.0563 -2.6877 -2.5750 7 6 2.8540 -2.0146 -3.4889 8 8 3.3120 -2.6570 -4.5955 9 6 4.1277 -1.9015 -5.4932 10 9 3.4038 -0.8030 -5.9690 11 9 5.2689 -1.4519 -4.8202 12 6 4.5391 -2.7726 -6.6521 13 8 4.1705 -3.9268 -6.7039 14 7 5.3176 -2.2692 -7.6304 15 6 5.7180 -3.1161 -8.7567 16 1 5.0207 -3.9335 -8.9405 17 6 6.0863 -2.3243 -10.0226 18 6 7.5239 -2.2759 -9.4788 19 1 7.7198 -1.4160 -8.8382 20 6 8.5772 -2.4694 -10.5391 21 6 9.5159 -1.4789 -10.7716 22 9 9.4881 -0.3380 -10.0485 23 6 10.4829 -1.6578 -11.7466 24 6 10.5094 -2.8245 -12.4866 25 6 9.5713 -3.8131 -12.2535 26 6 8.6098 -3.6383 -11.2760 27 6 7.1886 -3.5620 -8.6999 28 6 3.1876 -0.6862 -3.2688 29 6 2.7245 -0.0367 -2.1408 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8900 32 1 1.5614 2.4679 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 0.9753 -2.5575 -0.7366 35 1 1.7942 -3.7216 -2.7449 36 1 5.6127 -1.3462 -7.5888 37 1 5.9865 -2.9004 -10.9424 38 1 5.6082 -1.3464 -10.0804 39 1 11.2154 -0.8856 -11.9291 40 1 11.2632 -2.9641 -13.2474 41 1 9.5926 -4.7244 -12.8327 42 1 7.8805 -4.4132 -11.0915 43 1 7.5999 -3.5827 -7.6907 44 1 7.3898 -4.4760 -9.2589 45 1 3.8088 -0.1601 -3.9785 46 1 2.9836 0.9976 -1.9692 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:20:45 Heat of formation + Delta-G solvation = -149.162195 kcal Electronic energy + Delta-G solvation = -35945.503930 eV Core-core repulsion = 30546.894661 eV Total energy + Delta-G solvation = -5398.609270 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.122 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.92798 -49.91999 -48.89839 -41.80933 -41.37223 -40.46150 -39.35244 -38.81872 -37.25118 -35.08839 -32.47983 -32.11604 -31.88881 -31.41864 -29.14695 -26.81190 -26.62695 -26.01813 -24.59355 -23.80722 -23.00578 -22.65106 -22.43855 -20.68503 -20.49665 -19.74660 -19.72553 -18.76878 -18.52056 -17.77808 -17.45323 -17.34957 -16.95057 -16.82564 -16.65502 -16.60573 -16.42043 -16.20464 -15.86053 -15.73972 -15.45765 -15.38923 -15.30517 -15.24496 -15.14166 -15.05058 -14.85124 -14.43346 -14.37372 -14.24510 -14.17400 -13.97249 -13.61404 -13.52174 -13.11252 -13.06986 -13.04397 -12.40976 -12.40315 -12.16108 -12.02757 -11.88436 -11.85642 -11.60096 -11.33161 -10.53907 -10.47986 -10.20943 -9.88212 -9.59878 -9.58016 -5.01917 -0.00218 0.13803 0.18099 0.25001 0.41553 0.58150 1.29383 1.61162 1.64407 1.94474 1.95423 2.44303 2.60536 2.70759 3.18227 3.23199 3.35546 3.47593 3.51911 3.53052 3.57164 3.63636 3.73287 3.78644 3.88669 4.07274 4.07886 4.14328 4.19435 4.34792 4.37583 4.38615 4.45174 4.50180 4.66202 4.70919 4.75181 4.80992 4.88349 4.92662 4.94701 4.98214 5.02585 5.11010 5.20552 5.27963 5.32788 5.36622 5.46924 5.49811 5.77611 5.82577 5.95668 6.39632 6.76265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.068 4.068 3 Si 0.770 3.230 4 C -0.141 4.141 5 C -0.058 4.058 6 C -0.135 4.135 7 C 0.085 3.915 8 O -0.304 6.304 9 C 0.434 3.566 10 F -0.169 7.169 11 F -0.173 7.173 12 C 0.521 3.479 13 O -0.503 6.503 14 N -0.672 5.672 15 C 0.113 3.887 16 H 0.111 0.889 17 C -0.118 4.118 18 C -0.078 4.078 19 H 0.097 0.903 20 C -0.110 4.110 21 C 0.072 3.928 22 F -0.152 7.152 23 C -0.165 4.165 24 C -0.100 4.100 25 C -0.128 4.128 26 C -0.093 4.093 27 C -0.137 4.137 28 C -0.193 4.193 29 C -0.078 4.078 30 H 0.396 0.604 31 H 0.112 0.888 32 H -0.297 1.297 33 H -0.285 1.285 34 H 0.150 0.850 35 H 0.145 0.855 36 H 0.421 0.579 37 H 0.119 0.881 38 H 0.088 0.912 39 H 0.139 0.861 40 H 0.151 0.849 41 H 0.152 0.848 42 H 0.155 0.845 43 H 0.069 0.931 44 H 0.116 0.884 45 H 0.141 0.859 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.255 1.211 -6.005 6.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.178 4.178 3 Si 0.677 3.323 4 C -0.142 4.142 5 C -0.076 4.076 6 C -0.153 4.153 7 C 0.042 3.958 8 O -0.221 6.221 9 C 0.356 3.644 10 F -0.150 7.150 11 F -0.154 7.154 12 C 0.299 3.701 13 O -0.376 6.376 14 N -0.325 5.325 15 C 0.009 3.991 16 H 0.129 0.871 17 C -0.156 4.156 18 C -0.097 4.097 19 H 0.115 0.885 20 C -0.111 4.111 21 C 0.053 3.947 22 F -0.131 7.131 23 C -0.184 4.184 24 C -0.118 4.118 25 C -0.146 4.146 26 C -0.110 4.110 27 C -0.175 4.175 28 C -0.212 4.212 29 C -0.095 4.095 30 H 0.246 0.754 31 H 0.129 0.871 32 H -0.225 1.225 33 H -0.212 1.212 34 H 0.168 0.832 35 H 0.163 0.837 36 H 0.259 0.741 37 H 0.137 0.863 38 H 0.107 0.893 39 H 0.157 0.843 40 H 0.168 0.832 41 H 0.170 0.830 42 H 0.173 0.827 43 H 0.088 0.912 44 H 0.134 0.866 45 H 0.159 0.841 46 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.526 0.548 -5.119 5.369 hybrid contribution 0.648 0.568 0.573 1.035 sum 2.174 1.116 -4.546 5.161 Atomic orbital electron populations 1.86474 1.17007 1.82133 1.50542 1.25106 0.85397 1.10530 0.96784 0.93776 0.77903 0.75595 0.85051 1.20497 1.00338 0.95446 0.97898 1.21049 0.97083 0.93746 0.95702 1.20707 0.99204 1.01671 0.93750 1.19244 0.97334 0.92443 0.86743 1.86643 1.63844 1.39093 1.32501 1.21762 0.76758 0.79534 0.86304 1.93200 1.77960 1.55632 1.88255 1.93198 1.51012 1.89656 1.81562 1.19339 0.80734 0.87172 0.82854 1.90854 1.53948 1.16978 1.75819 1.45476 1.48898 1.16798 1.21337 1.22162 0.97150 0.94514 0.85262 0.87142 1.23417 0.93244 1.02070 0.96882 1.21619 0.93068 0.99629 0.95335 0.88495 1.19850 0.96949 0.94488 0.99842 1.17923 0.98786 0.83565 0.94468 1.91452 1.96249 1.48736 1.76639 1.21407 0.99409 1.00625 0.96927 1.21366 0.99229 0.92276 0.98896 1.21598 0.94692 1.00207 0.98083 1.21222 0.99121 0.96208 0.94485 1.23655 0.94282 0.98243 1.01333 1.21605 1.04815 0.93342 1.01418 1.21024 0.95849 1.00238 0.92430 0.75402 0.87057 1.22483 1.21250 0.83226 0.83682 0.74055 0.86270 0.89315 0.84290 0.83171 0.83045 0.82732 0.91202 0.86576 0.84120 0.82930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.32 12.77 -148.98 -1.90 -1.58 16 2 C -0.07 0.07 2.82 71.23 0.20 0.27 16 3 Si 0.77 -1.88 29.78 68.60 2.04 0.17 16 4 C -0.14 -0.05 5.39 -19.85 -0.11 -0.16 16 5 C -0.06 -0.08 9.60 22.25 0.21 0.13 16 6 C -0.13 -0.53 9.99 22.37 0.22 -0.30 16 7 C 0.09 0.52 6.48 22.51 0.15 0.67 16 8 O -0.30 -2.53 9.60 -73.42 -0.71 -3.23 16 9 C 0.43 1.78 2.05 71.24 0.15 1.93 16 10 F -0.17 -0.35 15.31 44.97 0.69 0.34 16 11 F -0.17 -0.53 15.28 44.97 0.69 0.16 16 12 C 0.52 2.08 7.34 87.66 0.64 2.72 16 13 O -0.50 -5.43 16.12 16.02 0.26 -5.17 16 14 N -0.67 1.83 5.26 -440.03 -2.32 -0.49 16 15 C 0.11 -0.50 4.30 45.52 0.20 -0.31 16 16 H 0.11 -0.31 7.50 -2.39 -0.02 -0.32 16 17 C -0.12 0.86 7.29 31.12 0.23 1.09 16 18 C -0.08 0.34 3.79 -10.92 -0.04 0.30 16 19 H 0.10 -0.30 7.45 -2.39 -0.02 -0.32 16 20 C -0.11 0.17 5.29 -19.82 -0.10 0.07 16 21 C 0.07 0.16 7.25 22.37 0.16 0.32 16 22 F -0.15 -0.79 16.37 44.97 0.74 -0.05 16 23 C -0.16 -0.01 10.03 22.31 0.22 0.21 16 24 C -0.10 0.32 10.04 22.26 0.22 0.55 16 25 C -0.13 0.62 10.04 22.27 0.22 0.84 16 26 C -0.09 0.44 8.63 22.26 0.19 0.63 16 27 C -0.14 0.66 7.27 31.21 0.23 0.89 16 28 C -0.19 -0.62 8.26 22.36 0.18 -0.43 16 29 C -0.08 -0.01 8.66 22.25 0.19 0.18 16 30 H 0.40 -3.33 8.70 -74.06 -0.64 -3.97 16 31 H 0.11 -0.03 7.96 -2.39 -0.02 -0.05 16 32 H -0.30 -1.49 7.11 99.48 0.71 -0.78 16 33 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 34 H 0.15 -0.15 8.06 -2.91 -0.02 -0.18 16 35 H 0.15 0.30 8.06 -2.91 -0.02 0.27 16 36 H 0.42 -2.97 8.70 -92.71 -0.81 -3.77 16 37 H 0.12 -1.12 7.73 -2.39 -0.02 -1.14 16 38 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 39 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 40 H 0.15 -1.12 8.06 -2.91 -0.02 -1.14 16 41 H 0.15 -1.41 8.06 -2.91 -0.02 -1.43 16 42 H 0.16 -1.47 6.64 -2.91 -0.02 -1.49 16 43 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 44 H 0.12 -0.87 6.30 -2.39 -0.02 -0.88 16 45 H 0.14 0.21 5.10 -2.91 -0.01 0.19 16 46 H 0.15 -0.69 4.87 -2.91 -0.01 -0.71 16 Total: 0.00 -19.66 396.76 2.53 -17.13 By element: Atomic # 1 Polarization: -16.54 SS G_CDS: -0.33 Total: -16.87 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 3.37 Total: 9.59 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -2.32 Total: -0.49 kcal Atomic # 8 Polarization: -7.63 SS G_CDS: -2.35 Total: -9.98 kcal Atomic # 9 Polarization: -1.66 SS G_CDS: 2.11 Total: 0.45 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: 2.04 Total: 0.17 kcal Total: -19.66 2.53 -17.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.031 kcal (2) G-P(sol) polarization free energy of solvation -19.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.131 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.162 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds