Wall clock time and date at job start Mon Mar 8 2021 02:00:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86294 * 109.47027 * 2 1 4 4 C 1.50703 * 109.46964 * 240.00378 * 2 1 3 5 5 C 1.34237 * 126.50356 * 105.35649 * 4 2 1 6 6 N 1.36833 * 109.93701 * 180.13244 * 5 4 2 7 7 C 1.46492 * 125.05993 * 179.81474 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69804 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09002 * 112.85022 * 335.91707 * 11 10 8 13 13 C 1.53782 * 113.61718 * 107.22525 * 11 10 8 14 14 C 1.53774 * 87.08161 * 89.11276 * 13 11 10 15 15 H 1.09004 * 113.61904 * 270.88211 * 14 13 11 16 16 C 1.50706 * 113.69278 * 139.99453 * 14 13 11 17 17 C 1.38429 * 120.01486 * 142.19081 * 16 14 13 18 18 F 1.35099 * 120.02617 * 359.97438 * 17 16 14 19 19 C 1.38486 * 119.94611 * 179.72673 * 17 16 14 20 20 C 1.38171 * 119.97345 * 0.57335 * 19 17 16 21 21 C 1.38265 * 120.02816 * 359.69767 * 20 19 17 22 22 C 1.38224 * 120.00540 * 322.46352 * 16 14 13 23 23 C 1.53781 * 113.61158 * 204.72374 * 11 10 8 24 24 C 1.37691 * 109.87438 * 359.55079 * 6 5 4 25 25 C 1.39085 * 133.51481 * 180.28253 * 24 6 5 26 26 C 1.37786 * 119.78149 * 179.97438 * 25 24 6 27 27 C 1.38788 * 120.66397 * 0.02562 * 26 25 24 28 28 C 1.36655 * 120.52877 * 359.95441 * 27 26 25 29 29 C 1.39589 * 119.76915 * 0.04683 * 28 27 26 30 30 H 0.96700 * 113.99498 * 60.00028 * 1 2 3 31 31 H 1.09001 * 109.47014 * 120.00103 * 2 1 3 32 32 H 1.48502 * 110.00532 * 298.68099 * 3 2 1 33 33 H 1.48507 * 110.00047 * 60.00318 * 3 2 1 34 34 H 1.08001 * 125.02710 * 359.96751 * 5 4 2 35 35 H 1.08998 * 109.47276 * 144.69720 * 7 6 5 36 36 H 1.09002 * 109.47526 * 24.70031 * 7 6 5 37 37 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 38 38 H 1.08999 * 113.61704 * 203.66488 * 13 11 10 39 39 H 1.09006 * 113.61098 * 334.56706 * 13 11 10 40 40 H 1.08002 * 120.01235 * 180.28767 * 19 17 16 41 41 H 1.07999 * 119.98859 * 179.72601 * 20 19 17 42 42 H 1.07999 * 119.97729 * 180.02562 * 21 20 19 43 43 H 1.07997 * 119.99023 * 359.95838 * 22 16 14 44 44 H 1.08995 * 113.61890 * 25.43111 * 23 11 10 45 45 H 1.09004 * 113.61421 * 156.25407 * 23 11 10 46 46 H 1.08007 * 120.10703 * 359.95673 * 25 24 6 47 47 H 1.08004 * 119.66780 * 180.02562 * 26 25 24 48 48 H 1.08003 * 119.73283 * 179.97438 * 27 26 25 49 49 H 1.08002 * 120.11998 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4670 -0.1380 -2.3203 6 7 2.8040 -1.0990 -3.2341 7 6 3.4095 -0.8404 -4.5428 8 6 2.3305 -0.7838 -5.5933 9 8 1.1699 -0.9442 -5.2797 10 7 2.6552 -0.5560 -6.8814 11 6 1.6056 -0.4949 -7.9016 12 1 0.7048 -1.0376 -7.6151 13 6 1.3319 0.9270 -8.4195 14 6 2.4182 0.6665 -9.4763 15 1 3.4212 0.9387 -9.1478 16 6 2.0805 1.2134 -10.8394 17 6 3.0720 1.7750 -11.6253 18 9 4.3429 1.8337 -11.1707 19 6 2.7612 2.2721 -12.8800 20 6 1.4598 2.2176 -13.3411 21 6 0.4692 1.6616 -12.5529 22 6 0.7794 1.1595 -11.3029 23 6 2.1028 -0.8303 -9.3176 24 6 2.4946 -2.3457 -2.7381 25 6 2.6301 -3.6362 -3.2387 26 6 2.2162 -4.7108 -2.4821 27 6 1.6639 -4.5193 -1.2233 28 6 1.5218 -3.2600 -0.7119 29 6 1.9344 -2.1570 -1.4612 30 1 -0.3932 0.4417 -0.7651 31 1 1.7924 -0.5139 0.8900 32 1 1.5880 2.4586 -1.2242 33 1 1.5615 2.4678 1.2086 34 1 2.6082 0.9240 -2.4567 35 1 4.1095 -1.6404 -4.7837 36 1 3.9406 0.1111 -4.5158 37 1 3.5835 -0.4280 -7.1321 38 1 0.3345 1.0539 -8.8405 39 1 1.5944 1.7092 -7.7071 40 1 3.5349 2.7062 -13.4959 41 1 1.2163 2.6092 -14.3177 42 1 -0.5476 1.6191 -12.9143 43 1 0.0050 0.7248 -10.6884 44 1 2.9876 -1.4667 -9.3305 45 1 1.3165 -1.1852 -9.9838 46 1 3.0581 -3.7955 -4.2175 47 1 2.3226 -5.7121 -2.8725 48 1 1.3441 -5.3723 -0.6433 49 1 1.0907 -3.1186 0.2683 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:00:05 Heat of formation + Delta-G solvation = 18.662552 kcal Electronic energy + Delta-G solvation = -33723.804459 eV Core-core repulsion = 29112.646949 eV Total energy + Delta-G solvation = -4611.157510 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -49.93017 -42.55481 -41.50965 -40.22666 -38.83408 -38.15105 -37.67603 -34.78513 -34.03224 -32.01325 -31.46723 -31.28034 -30.24327 -28.97280 -26.78727 -26.47764 -25.60788 -23.95440 -23.67913 -22.93736 -22.56706 -21.84279 -20.69584 -20.22249 -18.94517 -18.60743 -18.41850 -17.77430 -17.44289 -17.33431 -17.02369 -16.67959 -16.65511 -16.40266 -16.32071 -16.10893 -15.70617 -15.40338 -15.26977 -15.08440 -14.93369 -14.75057 -14.71574 -14.35370 -14.18814 -14.09918 -13.98058 -13.63806 -13.53082 -13.26118 -13.05856 -12.99530 -12.73311 -12.57422 -12.40713 -12.39061 -12.01133 -11.94928 -11.79501 -11.74429 -11.30123 -11.19398 -10.55984 -10.46171 -10.20665 -9.90244 -9.59885 -9.16205 -8.63843 -4.89942 0.14094 0.15888 0.22140 0.63875 1.33958 1.40129 1.41461 1.60896 1.69046 1.99116 2.15884 2.58005 2.94857 3.24319 3.38773 3.49514 3.54887 3.55613 3.62153 3.68798 3.72542 3.80628 3.84610 3.89962 4.04011 4.07331 4.13795 4.15120 4.22107 4.30033 4.33457 4.36343 4.49678 4.57124 4.59038 4.69166 4.71732 4.76877 4.78975 4.84429 4.89800 4.92391 4.95775 5.05211 5.09106 5.13815 5.22498 5.36097 5.46429 5.51034 5.53506 5.66605 5.73682 5.75195 5.93002 6.17690 6.22834 6.43212 6.53689 7.09169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.056 4.056 3 Si 0.785 3.215 4 C -0.215 4.215 5 C 0.074 3.926 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.494 3.506 9 O -0.570 6.570 10 N -0.696 5.696 11 C 0.119 3.881 12 H 0.085 0.915 13 C -0.138 4.138 14 C -0.070 4.070 15 H 0.103 0.897 16 C -0.112 4.112 17 C 0.075 3.925 18 F -0.149 7.149 19 C -0.164 4.164 20 C -0.100 4.100 21 C -0.129 4.129 22 C -0.096 4.096 23 C -0.122 4.122 24 C 0.091 3.909 25 C -0.134 4.134 26 C -0.107 4.107 27 C -0.154 4.154 28 C -0.088 4.088 29 C -0.115 4.115 30 H 0.381 0.619 31 H 0.110 0.890 32 H -0.274 1.274 33 H -0.304 1.304 34 H 0.196 0.804 35 H 0.146 0.854 36 H 0.164 0.836 37 H 0.419 0.581 38 H 0.100 0.900 39 H 0.069 0.931 40 H 0.142 0.858 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.148 0.852 44 H 0.087 0.913 45 H 0.103 0.897 46 H 0.133 0.867 47 H 0.145 0.855 48 H 0.136 0.864 49 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.589 1.536 -6.337 8.588 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.164 4.164 3 Si 0.689 3.311 4 C -0.222 4.222 5 C -0.052 4.052 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.280 3.720 9 O -0.448 6.448 10 N -0.349 5.349 11 C 0.013 3.987 12 H 0.103 0.897 13 C -0.176 4.176 14 C -0.088 4.088 15 H 0.121 0.879 16 C -0.113 4.113 17 C 0.056 3.944 18 F -0.128 7.128 19 C -0.182 4.182 20 C -0.117 4.117 21 C -0.147 4.147 22 C -0.114 4.114 23 C -0.160 4.160 24 C -0.014 4.014 25 C -0.154 4.154 26 C -0.126 4.126 27 C -0.172 4.172 28 C -0.106 4.106 29 C -0.120 4.120 30 H 0.230 0.770 31 H 0.128 0.872 32 H -0.200 1.200 33 H -0.232 1.232 34 H 0.213 0.787 35 H 0.164 0.836 36 H 0.182 0.818 37 H 0.257 0.743 38 H 0.118 0.882 39 H 0.088 0.912 40 H 0.160 0.840 41 H 0.169 0.831 42 H 0.167 0.833 43 H 0.165 0.835 44 H 0.106 0.894 45 H 0.122 0.878 46 H 0.151 0.849 47 H 0.163 0.837 48 H 0.154 0.846 49 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 4.851 2.005 -5.852 7.861 hybrid contribution -0.737 -0.120 -0.592 0.952 sum 4.114 1.885 -6.444 7.874 Atomic orbital electron populations 1.86555 1.19522 1.80572 1.49653 1.24709 0.82533 1.12000 0.97121 0.94188 0.89626 0.70535 0.76763 1.20706 1.10793 0.91913 0.98822 1.22007 0.99589 0.95067 0.88515 1.43407 1.53349 1.03856 1.14187 1.21990 0.93696 1.09297 0.78727 1.21492 0.90531 0.75662 0.84314 1.90802 1.22353 1.50080 1.81605 1.45520 1.11283 1.72186 1.05903 1.21777 0.91737 0.97405 0.87772 0.89718 1.23540 0.99655 0.97067 0.97372 1.21509 1.00256 0.96529 0.90529 0.87865 1.19897 0.93416 1.01026 0.96922 1.17864 0.78993 1.02858 0.94730 1.91451 1.37377 1.94700 1.89253 1.21424 0.99242 1.02573 0.94987 1.21360 0.91510 0.97888 1.00988 1.21579 1.00910 0.98007 0.94241 1.21182 0.95166 0.98648 0.96383 1.23369 1.02960 0.95058 0.94640 1.18402 1.01782 0.86970 0.94230 1.20249 1.05051 0.89119 1.01029 1.21131 0.98147 0.99025 0.94307 1.20918 1.02290 0.97048 0.96991 1.20451 0.98932 0.91685 0.99556 1.19336 1.03806 0.93789 0.95022 0.77040 0.87188 1.20025 1.23167 0.78706 0.83633 0.81819 0.74268 0.88210 0.91239 0.84021 0.83088 0.83282 0.83480 0.89423 0.87844 0.84945 0.83702 0.84585 0.86309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.84 12.88 -148.98 -1.92 -6.76 16 2 C -0.06 -0.24 3.06 71.24 0.22 -0.02 16 3 Si 0.79 -0.64 30.81 68.60 2.11 1.48 16 4 C -0.21 -1.25 5.58 -18.62 -0.10 -1.36 16 5 C 0.07 0.11 9.89 83.00 0.82 0.93 16 6 N -0.47 -0.82 2.27 -520.00 -1.18 -2.00 16 7 C 0.09 -0.61 6.48 85.64 0.56 -0.06 16 8 C 0.49 -0.36 7.90 87.66 0.69 0.34 16 9 O -0.57 -6.29 16.02 -3.04 -0.05 -6.33 16 10 N -0.70 4.32 5.26 -440.03 -2.32 2.01 16 11 C 0.12 -0.41 4.32 45.52 0.20 -0.22 16 12 H 0.08 0.14 7.47 -2.39 -0.02 0.13 16 13 C -0.14 0.53 7.26 31.12 0.23 0.76 16 14 C -0.07 0.31 3.78 -11.01 -0.04 0.27 16 15 H 0.10 -0.49 7.44 -2.39 -0.02 -0.51 16 16 C -0.11 0.13 5.30 -19.82 -0.10 0.02 16 17 C 0.07 0.14 7.25 22.37 0.16 0.30 16 18 F -0.15 -0.58 16.36 44.97 0.74 0.16 16 19 C -0.16 0.03 10.03 22.31 0.22 0.25 16 20 C -0.10 0.29 10.04 22.26 0.22 0.51 16 21 C -0.13 0.49 10.04 22.27 0.22 0.71 16 22 C -0.10 0.31 8.62 22.26 0.19 0.50 16 23 C -0.12 0.75 7.29 31.12 0.23 0.98 16 24 C 0.09 0.66 6.80 39.03 0.27 0.93 16 25 C -0.13 -0.70 10.00 22.37 0.22 -0.48 16 26 C -0.11 -0.52 10.01 22.29 0.22 -0.30 16 27 C -0.15 -1.02 9.97 22.03 0.22 -0.80 16 28 C -0.09 -0.84 10.05 22.23 0.22 -0.61 16 29 C -0.12 -1.14 6.35 -20.20 -0.13 -1.27 16 30 H 0.38 1.45 8.70 -74.06 -0.64 0.80 16 31 H 0.11 0.43 7.96 -2.39 -0.02 0.41 16 32 H -0.27 -0.36 7.00 99.48 0.70 0.34 16 33 H -0.30 -2.13 7.11 99.48 0.71 -1.42 16 34 H 0.20 -1.00 6.27 -2.91 -0.02 -1.02 16 35 H 0.15 -1.77 8.14 -2.39 -0.02 -1.79 16 36 H 0.16 -2.47 8.12 -2.39 -0.02 -2.49 16 37 H 0.42 -5.34 8.70 -92.71 -0.81 -6.15 16 38 H 0.10 -0.44 6.32 -2.39 -0.02 -0.46 16 39 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 40 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 41 H 0.15 -1.09 8.06 -2.91 -0.02 -1.12 16 42 H 0.15 -1.18 8.06 -2.91 -0.02 -1.20 16 43 H 0.15 -0.99 6.67 -2.91 -0.02 -1.01 16 44 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 45 H 0.10 -0.66 7.73 -2.39 -0.02 -0.68 16 46 H 0.13 0.05 8.06 -2.91 -0.02 0.03 16 47 H 0.15 -0.04 8.06 -2.91 -0.02 -0.06 16 48 H 0.14 0.34 8.06 -2.91 -0.02 0.32 16 49 H 0.12 1.02 8.06 -2.91 -0.02 0.99 16 Total: 0.00 -27.90 413.93 1.71 -26.19 By element: Atomic # 1 Polarization: -15.71 SS G_CDS: -0.41 Total: -16.12 kcal Atomic # 6 Polarization: -3.36 SS G_CDS: 4.74 Total: 1.38 kcal Atomic # 7 Polarization: 3.50 SS G_CDS: -3.50 Total: 0.01 kcal Atomic # 8 Polarization: -11.12 SS G_CDS: -1.97 Total: -13.09 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 0.74 Total: 0.16 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: 2.11 Total: 1.48 kcal Total: -27.90 1.71 -26.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.857 kcal (2) G-P(sol) polarization free energy of solvation -27.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.194 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds