Wall clock time and date at job start Mon Mar 8 2021 02:00:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.42904 * 109.46698 * 2 1 4 4 C 1.35896 * 117.00241 * 84.95008 * 3 2 1 5 5 C 1.38730 * 120.05620 * 174.27672 * 4 3 2 6 6 C 1.38144 * 119.94563 * 179.70215 * 5 4 3 7 7 C 1.38267 * 120.05441 * 0.58876 * 6 5 4 8 8 C 1.50696 * 119.94611 * 179.70393 * 7 6 5 9 9 O 1.42901 * 109.47165 * 244.97952 * 8 7 6 10 10 Si 1.86301 * 109.47112 * 4.98106 * 8 7 6 11 11 C 1.38271 * 120.10938 * 359.68181 * 7 6 5 12 12 C 1.38144 * 120.05834 * 0.02562 * 11 7 6 13 13 C 1.50690 * 109.47264 * 239.99751 * 2 1 3 14 14 O 1.21279 * 120.00171 * 119.99937 * 13 2 1 15 15 N 1.34779 * 119.99944 * 300.00213 * 13 2 1 16 16 C 1.46503 * 119.99874 * 180.02562 * 15 13 2 17 17 H 1.08998 * 112.85004 * 334.65493 * 16 15 13 18 18 C 1.53780 * 113.61811 * 105.85894 * 16 15 13 19 19 C 1.53954 * 87.01781 * 89.22879 * 18 16 15 20 20 H 1.09005 * 113.61434 * 270.79436 * 19 18 16 21 21 C 1.50706 * 113.66634 * 139.93751 * 19 18 16 22 22 C 1.38233 * 119.99702 * 322.15961 * 21 19 18 23 23 C 1.38229 * 120.00034 * 179.78781 * 22 21 19 24 24 C 1.38236 * 119.99888 * 0.44842 * 23 22 21 25 25 C 1.38233 * 120.00005 * 359.80704 * 24 23 22 26 26 C 1.38226 * 120.00048 * 142.43883 * 21 19 18 27 27 C 1.53781 * 87.11432 * 25.36321 * 19 18 16 28 28 H 1.09002 * 109.47022 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.47172 * 300.00296 * 1 2 3 30 30 H 1.08997 * 109.47403 * 60.00481 * 1 2 3 31 31 H 1.08997 * 109.46674 * 119.99664 * 2 1 3 32 32 H 1.07999 * 120.02676 * 359.97438 * 5 4 3 33 33 H 1.07996 * 119.97629 * 180.27216 * 6 5 4 34 34 H 1.09002 * 109.47153 * 124.97913 * 8 7 6 35 35 H 0.96693 * 114.00071 * 59.99758 * 9 8 7 36 36 H 1.48499 * 110.00065 * 179.97438 * 10 8 7 37 37 H 1.48503 * 109.99947 * 301.31632 * 10 8 7 38 38 H 1.08004 * 119.97015 * 180.02562 * 11 7 6 39 39 H 1.07994 * 120.03049 * 179.97438 * 12 11 7 40 40 H 0.97001 * 120.00151 * 359.97438 * 15 13 2 41 41 H 1.08998 * 113.61594 * 203.74565 * 18 16 15 42 42 H 1.08999 * 113.61495 * 334.65254 * 18 16 15 43 43 H 1.08004 * 119.99810 * 0.02562 * 22 21 19 44 44 H 1.08001 * 120.00219 * 180.27768 * 23 22 21 45 45 H 1.07998 * 120.00362 * 179.83230 * 24 23 22 46 46 H 1.08003 * 120.00405 * 180.02562 * 25 24 23 47 47 H 1.08005 * 120.00613 * 359.97388 * 26 21 19 48 48 H 1.08998 * 113.61441 * 220.08802 * 27 19 18 49 49 H 1.08999 * 113.60969 * 89.18999 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9646 1.2061 5 6 2.6774 3.2282 1.2930 6 6 2.7776 3.8561 2.5194 7 6 2.3253 3.2212 3.6614 8 6 2.4419 3.9057 4.9989 9 8 3.3410 3.1720 5.8327 10 14 3.0906 5.6353 4.7569 11 6 1.7659 1.9595 3.5782 12 6 1.6580 1.3298 2.3534 13 6 2.0324 -0.7104 -1.2303 14 8 2.7296 -0.1211 -2.0287 15 7 1.7068 -2.0008 -1.4436 16 6 2.1956 -2.6916 -2.6395 17 1 2.4140 -2.0106 -3.4621 18 6 3.3259 -3.6942 -2.3530 19 6 2.2258 -4.7482 -2.1313 20 1 1.8705 -4.7986 -1.1020 21 6 2.5617 -6.1023 -2.7013 22 6 3.2342 -6.1978 -3.9052 23 6 3.5462 -7.4397 -4.4259 24 6 3.1774 -8.5862 -3.7473 25 6 2.5002 -8.4907 -2.5460 26 6 2.1921 -7.2486 -2.0231 27 6 1.3335 -3.8970 -3.0501 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5137 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 3.0355 3.7224 0.4019 33 1 3.2141 4.8416 2.5870 34 1 1.4607 3.9486 5.4718 35 1 4.2353 3.0936 5.4734 36 1 3.2095 6.3213 6.0685 37 1 4.4137 5.5920 4.0840 38 1 1.4130 1.4658 4.4717 39 1 1.2214 0.3442 2.2890 40 1 1.1494 -2.4723 -0.8049 41 1 3.9581 -3.8981 -3.2172 42 1 3.8975 -3.4627 -1.4543 43 1 3.5194 -5.3021 -4.4371 44 1 4.0756 -7.5144 -5.3643 45 1 3.4187 -9.5565 -4.1554 46 1 2.2124 -9.3864 -2.0156 47 1 1.6630 -7.1740 -1.0845 48 1 0.2991 -3.8291 -2.7134 49 1 1.4201 -4.1566 -4.1052 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:00:14 Heat of formation + Delta-G solvation = -18.873003 kcal Electronic energy + Delta-G solvation = -29875.308235 eV Core-core repulsion = 25735.173037 eV Total energy + Delta-G solvation = -4140.135198 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.95171 -41.33836 -40.31335 -39.26275 -38.53385 -37.23650 -34.91154 -33.23177 -32.09207 -31.91466 -31.67256 -31.19036 -26.90346 -26.84167 -26.39764 -25.32712 -24.18415 -23.58016 -22.70922 -22.33773 -21.52188 -20.26070 -19.49033 -18.68749 -18.27622 -18.01827 -17.26244 -16.86273 -16.75504 -16.37187 -16.27404 -16.17379 -16.12930 -15.63717 -15.52780 -15.25648 -14.98762 -14.75064 -14.64687 -14.41807 -14.30651 -14.22108 -14.13263 -13.73148 -13.59338 -13.54923 -13.29545 -13.14045 -12.98074 -12.81996 -12.26130 -12.20556 -12.15325 -12.09984 -11.83790 -11.80348 -11.55616 -11.28034 -10.85078 -10.57821 -10.21302 -10.05787 -9.85061 -9.60036 -9.21991 -4.95254 0.23172 0.33230 0.39184 0.46766 1.29658 1.38704 1.46487 1.60059 1.97057 2.40776 2.63785 2.79049 3.30935 3.35066 3.39055 3.51503 3.54496 3.60547 3.70077 3.71193 3.81335 3.82463 3.84220 3.95581 4.07277 4.12946 4.18788 4.20932 4.24283 4.38298 4.43067 4.48101 4.54184 4.56834 4.59992 4.61952 4.62632 4.70821 4.84458 4.86609 4.88868 4.97212 5.00539 5.06385 5.11048 5.17481 5.28075 5.41361 5.46563 5.54366 5.60854 5.64649 5.68058 6.06589 6.20403 6.35288 6.40892 7.04758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.142 4.142 6 C -0.076 4.076 7 C -0.156 4.156 8 C -0.069 4.069 9 O -0.531 6.531 10 Si 0.683 3.317 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.522 3.478 14 O -0.509 6.509 15 N -0.709 5.709 16 C 0.120 3.880 17 H 0.107 0.893 18 C -0.144 4.144 19 C -0.074 4.074 20 H 0.097 0.903 21 C -0.073 4.073 22 C -0.117 4.117 23 C -0.117 4.117 24 C -0.124 4.124 25 C -0.118 4.118 26 C -0.117 4.117 27 C -0.134 4.134 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.078 0.922 31 H 0.101 0.899 32 H 0.137 0.863 33 H 0.134 0.866 34 H 0.117 0.883 35 H 0.376 0.624 36 H -0.257 1.257 37 H -0.260 1.260 38 H 0.129 0.871 39 H 0.131 0.869 40 H 0.402 0.598 41 H 0.097 0.903 42 H 0.074 0.926 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.122 0.878 47 H 0.120 0.880 48 H 0.078 0.922 49 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.802 -2.771 0.205 4.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.160 4.160 6 C -0.094 4.094 7 C -0.156 4.156 8 C -0.179 4.179 9 O -0.338 6.338 10 Si 0.585 3.415 11 C -0.068 4.068 12 C -0.231 4.231 13 C 0.306 3.694 14 O -0.382 6.382 15 N -0.363 5.363 16 C 0.015 3.985 17 H 0.125 0.875 18 C -0.182 4.182 19 C -0.092 4.092 20 H 0.115 0.885 21 C -0.073 4.073 22 C -0.135 4.135 23 C -0.135 4.135 24 C -0.142 4.142 25 C -0.136 4.136 26 C -0.135 4.135 27 C -0.172 4.172 28 H 0.098 0.902 29 H 0.098 0.902 30 H 0.097 0.903 31 H 0.119 0.881 32 H 0.155 0.845 33 H 0.151 0.849 34 H 0.135 0.865 35 H 0.223 0.777 36 H -0.182 1.182 37 H -0.185 1.185 38 H 0.147 0.853 39 H 0.149 0.851 40 H 0.237 0.763 41 H 0.115 0.885 42 H 0.093 0.907 43 H 0.141 0.859 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.140 0.860 47 H 0.138 0.862 48 H 0.096 0.904 49 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.131 -1.704 -0.029 3.565 hybrid contribution 0.484 -1.488 0.640 1.691 sum -2.647 -3.192 0.612 4.192 Atomic orbital electron populations 1.22370 0.92239 1.03916 1.05008 1.22184 0.95947 0.83295 0.97913 1.86221 1.80907 1.25374 1.27049 1.19085 0.95035 0.92871 0.83983 1.20414 1.03175 0.93660 0.98778 1.20886 0.97923 0.99108 0.91492 1.20180 1.03561 0.96578 0.95304 1.24938 0.98163 1.04960 0.89875 1.86593 1.24288 1.75099 1.47789 0.94994 0.85375 0.77901 0.83242 1.20801 0.95476 0.93665 0.96896 1.21322 1.07278 1.01792 0.92661 1.20083 0.80499 0.81812 0.87012 1.90780 1.36037 1.65628 1.45761 1.45530 1.54002 1.11307 1.25432 1.21883 0.95182 0.93294 0.88123 0.87539 1.23603 0.96561 0.94773 1.03311 1.21630 0.97488 0.90736 0.99338 0.88525 1.19667 0.98301 0.94282 0.95024 1.21022 0.99012 0.97737 0.95729 1.21186 0.99806 0.92537 0.99988 1.21208 0.98778 0.98666 0.95529 1.21189 0.98640 0.97621 0.96160 1.21064 1.00344 0.92140 0.99939 1.23418 0.98802 0.93922 1.01026 0.90235 0.90195 0.90334 0.88139 0.84481 0.84864 0.86522 0.77662 1.18245 1.18497 0.85303 0.85107 0.76330 0.88486 0.90685 0.85949 0.85973 0.86063 0.86029 0.86192 0.90379 0.88165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.49 9.07 37.16 0.34 0.82 16 2 C 0.07 -0.03 2.64 -27.89 -0.07 -0.11 16 3 O -0.28 -0.77 9.33 -39.32 -0.37 -1.14 16 4 C 0.14 0.22 6.60 -39.22 -0.26 -0.03 16 5 C -0.14 -0.18 9.99 -39.43 -0.39 -0.58 16 6 C -0.08 -0.01 8.66 -39.61 -0.34 -0.35 16 7 C -0.16 -0.03 5.35 -104.60 -0.56 -0.59 16 8 C -0.07 0.02 2.80 36.00 0.10 0.12 16 9 O -0.53 -0.67 12.83 -35.23 -0.45 -1.12 16 10 Si 0.68 -0.56 29.88 -169.99 -5.08 -5.64 16 11 C -0.05 -0.01 9.68 -39.60 -0.38 -0.39 16 12 C -0.21 0.00 8.24 -39.43 -0.33 -0.32 16 13 C 0.52 0.74 7.23 -10.99 -0.08 0.66 16 14 O -0.51 -3.20 16.12 -14.35 -0.23 -3.43 16 15 N -0.71 1.26 5.16 -53.02 -0.27 0.99 16 16 C 0.12 -0.14 4.29 -67.12 -0.29 -0.43 16 17 H 0.11 0.07 7.50 -51.93 -0.39 -0.32 16 18 C -0.14 0.18 7.27 -25.83 -0.19 0.00 16 19 C -0.07 0.15 3.87 -90.87 -0.35 -0.20 16 20 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 21 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 22 C -0.12 0.01 8.60 -39.59 -0.34 -0.33 16 23 C -0.12 -0.03 10.05 -39.59 -0.40 -0.42 16 24 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 25 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 26 C -0.12 0.01 9.71 -39.59 -0.38 -0.38 16 27 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 28 H 0.08 -0.41 7.57 -51.93 -0.39 -0.81 16 29 H 0.08 -0.24 6.91 -51.93 -0.36 -0.59 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.10 -0.26 6.31 -51.93 -0.33 -0.59 16 32 H 0.14 0.09 8.06 -52.49 -0.42 -0.34 16 33 H 0.13 -0.20 4.83 -52.49 -0.25 -0.46 16 34 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 35 H 0.38 -0.52 8.70 45.56 0.40 -0.12 16 36 H -0.26 -0.65 7.11 56.52 0.40 -0.24 16 37 H -0.26 -0.30 7.01 56.52 0.40 0.10 16 38 H 0.13 -0.10 8.06 -52.48 -0.42 -0.53 16 39 H 0.13 -0.30 5.43 -52.49 -0.28 -0.58 16 40 H 0.40 -1.90 8.13 -40.82 -0.33 -2.23 16 41 H 0.10 -0.13 6.34 -51.93 -0.33 -0.46 16 42 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 43 H 0.12 -0.17 6.68 -52.48 -0.35 -0.52 16 44 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 45 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 46 H 0.12 -0.16 8.06 -52.48 -0.42 -0.59 16 47 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 48 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 49 H 0.10 -0.24 7.71 -51.93 -0.40 -0.64 16 LS Contribution 399.09 15.07 6.01 6.01 Total: 0.00 -8.98 399.09 -12.72 -21.70 By element: Atomic # 1 Polarization: -6.75 SS G_CDS: -6.87 Total: -13.61 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.47 Total: -3.77 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.27 Total: 0.99 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -1.05 Total: -5.69 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.08 Total: -5.64 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -8.98 -12.72 -21.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.828 kcal (2) G-P(sol) polarization free energy of solvation -8.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.701 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds