Wall clock time and date at job start Mon Mar 8 2021 02:00:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86311 * 109.47087 * 2 1 4 4 C 1.50701 * 109.47383 * 120.00159 * 2 1 3 5 5 C 1.35458 * 126.06540 * 244.97446 * 4 2 1 6 6 N 1.35538 * 108.86978 * 179.78437 * 5 4 2 7 7 C 1.37648 * 108.64325 * 0.38330 * 6 5 4 8 8 C 1.46680 * 126.23601 * 179.89052 * 7 6 5 9 9 O 1.21691 * 120.00287 * 179.68578 * 8 7 6 10 10 N 1.34779 * 119.99242 * 359.68509 * 8 7 6 11 11 C 1.46496 * 119.99390 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.91246 * 23.74616 * 11 10 8 13 13 C 1.53786 * 113.61518 * 154.99856 * 11 10 8 14 14 C 1.53781 * 87.17350 * 89.15486 * 13 11 10 15 15 H 1.08997 * 113.61223 * 270.84552 * 14 13 11 16 16 C 1.50703 * 113.61417 * 139.93966 * 14 13 11 17 17 C 1.38231 * 119.99840 * 299.72831 * 16 14 13 18 18 C 1.38243 * 119.99645 * 179.74529 * 17 16 14 19 19 C 1.38231 * 120.00049 * 0.52800 * 18 17 16 20 20 C 1.38242 * 119.99914 * 359.74492 * 19 18 17 21 21 C 1.38231 * 120.00008 * 120.00161 * 16 14 13 22 22 C 1.53782 * 87.08260 * 25.39213 * 14 13 11 23 23 C 1.37878 * 107.53249 * 359.62030 * 7 6 5 24 24 H 0.96701 * 113.99974 * 299.99679 * 1 2 3 25 25 H 1.08999 * 109.47499 * 240.00288 * 2 1 3 26 26 H 1.48497 * 109.99730 * 178.68127 * 3 2 1 27 27 H 1.48496 * 109.99741 * 300.00137 * 3 2 1 28 28 H 1.07997 * 125.56635 * 359.97438 * 5 4 2 29 29 H 0.96990 * 125.67593 * 180.26517 * 6 5 4 30 30 H 0.97001 * 120.00492 * 359.97438 * 10 8 7 31 31 H 1.09002 * 113.61357 * 334.56403 * 13 11 10 32 32 H 1.09002 * 113.61608 * 203.74565 * 13 11 10 33 33 H 1.08003 * 120.00202 * 359.97438 * 17 16 14 34 34 H 1.08002 * 120.00013 * 180.29691 * 18 17 16 35 35 H 1.08001 * 120.00334 * 179.77247 * 19 18 17 36 36 H 1.08001 * 119.99836 * 179.97438 * 20 19 18 37 37 H 1.08005 * 120.00129 * 359.97438 * 21 16 14 38 38 H 1.08997 * 113.61668 * 89.11298 * 22 14 13 39 39 H 1.08994 * 113.61387 * 220.02033 * 22 14 13 40 40 H 1.08002 * 126.45326 * 180.19609 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6339 -0.1499 2.2439 6 7 2.9017 -1.1020 3.1707 7 6 2.3692 -2.2964 2.7411 8 6 2.4368 -3.5799 3.4479 9 8 1.9189 -4.5691 2.9639 10 7 3.0726 -3.6636 4.6333 11 6 3.1406 -4.9457 5.3389 12 1 3.0297 -5.8023 4.6742 13 6 4.3392 -5.0594 6.2957 14 6 3.4338 -4.4521 7.3803 15 1 3.4635 -3.3631 7.4143 16 6 3.6073 -5.0864 8.7363 17 6 3.3583 -6.4356 8.9052 18 6 3.5226 -7.0184 10.1479 19 6 3.9253 -6.2499 11.2240 20 6 4.1689 -4.8995 11.0562 21 6 4.0101 -4.3179 9.8123 22 6 2.2411 -5.0113 6.5868 23 6 1.7555 -2.0652 1.5283 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5138 -0.8900 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4679 -1.2085 28 1 2.9296 0.8870 2.3051 29 1 3.3889 -0.9648 3.9981 30 1 3.4857 -2.8752 5.0189 31 1 5.1794 -4.4217 6.0208 32 1 4.6377 -6.0874 6.5014 33 1 3.0389 -7.0350 8.0654 34 1 3.3326 -8.0735 10.2788 35 1 4.0501 -6.7045 12.1957 36 1 4.4832 -4.2990 11.8971 37 1 4.2008 -3.2629 9.6813 38 1 1.9648 -6.0265 6.8712 39 1 1.3875 -4.3347 6.5468 40 1 1.2370 -2.7935 0.9223 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:00:17 Heat of formation + Delta-G solvation = 32.612678 kcal Electronic energy + Delta-G solvation = -22812.605831 eV Core-core repulsion = 19367.260879 eV Total energy + Delta-G solvation = -3445.344952 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.131 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.53579 -41.45822 -40.00664 -38.64626 -37.62257 -34.71694 -32.61486 -31.94923 -31.67864 -30.59127 -26.88368 -26.84889 -26.04848 -24.29312 -23.49213 -22.46462 -21.28311 -20.85828 -20.34632 -19.86921 -18.13495 -17.48835 -17.19207 -16.87390 -16.42666 -16.26242 -16.11895 -15.82191 -15.57088 -15.14605 -15.01689 -14.77095 -14.50349 -14.32776 -14.27015 -14.11932 -13.90783 -13.60074 -13.49360 -13.15767 -12.81435 -12.27427 -12.23211 -11.96061 -11.85149 -11.80903 -11.28829 -11.16136 -10.35317 -10.23360 -9.97431 -9.86140 -9.61222 -9.33077 -5.05671 0.36974 0.39362 0.45706 1.34071 1.48120 1.65123 1.88091 1.97754 2.02192 2.34049 2.78116 3.32011 3.55555 3.58733 3.61310 3.72626 3.81011 3.86831 3.94501 4.01219 4.06192 4.11668 4.19721 4.33430 4.47224 4.53021 4.59066 4.61979 4.65842 4.72729 4.83349 4.87643 4.90493 5.00298 5.04013 5.05636 5.10057 5.40967 5.53210 5.57857 5.59899 5.66876 5.77547 6.05507 6.17279 6.38117 6.71360 7.09820 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.033 4.033 3 Si 0.686 3.314 4 C -0.211 4.211 5 C 0.036 3.964 6 N -0.536 5.536 7 C -0.059 4.059 8 C 0.593 3.407 9 O -0.521 6.521 10 N -0.715 5.715 11 C 0.120 3.880 12 H 0.109 0.891 13 C -0.135 4.135 14 C -0.073 4.073 15 H 0.095 0.905 16 C -0.073 4.073 17 C -0.117 4.117 18 C -0.117 4.117 19 C -0.124 4.124 20 C -0.118 4.118 21 C -0.117 4.117 22 C -0.143 4.143 23 C -0.074 4.074 24 H 0.377 0.623 25 H 0.111 0.889 26 H -0.257 1.257 27 H -0.256 1.256 28 H 0.176 0.824 29 H 0.418 0.582 30 H 0.394 0.606 31 H 0.075 0.925 32 H 0.100 0.900 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.120 0.880 38 H 0.097 0.903 39 H 0.075 0.925 40 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.578 4.216 5.422 7.336 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.145 4.145 3 Si 0.588 3.412 4 C -0.218 4.218 5 C -0.101 4.101 6 N -0.132 5.132 7 C -0.171 4.171 8 C 0.381 3.619 9 O -0.396 6.396 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.127 0.873 13 C -0.173 4.173 14 C -0.091 4.091 15 H 0.113 0.887 16 C -0.073 4.073 17 C -0.135 4.135 18 C -0.135 4.135 19 C -0.142 4.142 20 C -0.136 4.136 21 C -0.135 4.135 22 C -0.182 4.182 23 C -0.100 4.100 24 H 0.224 0.776 25 H 0.129 0.871 26 H -0.182 1.182 27 H -0.181 1.181 28 H 0.193 0.807 29 H 0.255 0.745 30 H 0.228 0.772 31 H 0.094 0.906 32 H 0.118 0.882 33 H 0.141 0.859 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.138 0.862 38 H 0.115 0.885 39 H 0.094 0.906 40 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.849 3.734 4.230 6.321 hybrid contribution 0.624 -0.076 0.618 0.882 sum 3.473 3.658 4.849 6.997 Atomic orbital electron populations 1.86508 1.17436 1.81739 1.49010 1.24375 0.84771 1.09023 0.96325 0.95210 0.80439 0.77738 0.87794 1.19901 1.07619 0.95178 0.99091 1.21875 1.03047 0.94642 0.90516 1.41919 1.44098 1.07807 1.19343 1.20386 1.11010 0.86002 0.99731 1.17041 0.78080 0.86758 0.80019 1.90883 1.45930 1.36144 1.66642 1.45536 1.57776 1.11816 1.21484 1.21912 0.96648 0.86888 0.93064 0.87318 1.23432 0.96541 1.02904 0.94424 1.21580 0.97270 0.99538 0.90759 0.88707 1.19665 0.99226 0.93839 0.94559 1.21031 1.00405 0.94510 0.97541 1.21193 0.99325 1.00023 0.92949 1.21212 0.99679 0.94242 0.99036 1.21188 0.99846 0.95246 0.97331 1.21054 1.00146 0.99681 0.92647 1.23606 0.97026 1.02748 0.94821 1.21234 0.99048 0.95705 0.94056 0.77583 0.87122 1.18230 1.18067 0.80676 0.74479 0.77209 0.90592 0.88163 0.85908 0.85943 0.86044 0.86023 0.86240 0.88452 0.90640 0.83183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.46 12.88 -35.23 -0.45 -0.92 16 2 C -0.03 0.00 3.02 36.01 0.11 0.11 16 3 Si 0.69 -1.23 30.60 -169.99 -5.20 -6.44 16 4 C -0.21 -0.01 5.43 -105.02 -0.57 -0.58 16 5 C 0.04 -0.09 10.45 -16.91 -0.18 -0.26 16 6 N -0.54 1.45 5.99 -9.39 -0.06 1.39 16 7 C -0.06 -0.05 7.06 -81.98 -0.58 -0.63 16 8 C 0.59 1.30 7.79 -12.85 -0.10 1.20 16 9 O -0.52 -3.34 16.48 5.20 0.09 -3.26 16 10 N -0.72 0.88 5.26 -54.23 -0.29 0.59 16 11 C 0.12 -0.11 4.33 -67.02 -0.29 -0.40 16 12 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 13 C -0.14 0.31 7.29 -25.92 -0.19 0.12 16 14 C -0.07 0.15 3.86 -90.96 -0.35 -0.20 16 15 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 16 C -0.07 0.02 5.29 -104.63 -0.55 -0.53 16 17 C -0.12 0.01 8.63 -39.58 -0.34 -0.34 16 18 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 19 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 20 C -0.12 -0.02 10.05 -39.58 -0.40 -0.41 16 21 C -0.12 0.01 9.71 -39.59 -0.38 -0.37 16 22 C -0.14 0.17 7.26 -25.82 -0.19 -0.01 16 23 C -0.07 -0.16 10.59 -39.12 -0.41 -0.58 16 24 H 0.38 -1.20 8.70 45.56 0.40 -0.80 16 25 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 26 H -0.26 -0.08 7.11 56.52 0.40 0.33 16 27 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 28 H 0.18 -0.98 6.21 -52.49 -0.33 -1.31 16 29 H 0.42 -2.55 8.19 -40.82 -0.33 -2.88 16 30 H 0.39 -1.67 7.83 -40.82 -0.32 -1.99 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.10 -0.21 7.73 -51.93 -0.40 -0.62 16 33 H 0.12 -0.17 6.64 -52.48 -0.35 -0.52 16 34 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 36 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.12 -0.22 8.06 -52.48 -0.42 -0.64 16 38 H 0.10 -0.13 6.30 -51.93 -0.33 -0.45 16 39 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.15 0.49 8.06 -52.49 -0.42 0.07 16 LS Contribution 337.96 15.07 5.09 5.09 Total: 0.00 -9.27 337.96 -11.08 -20.35 By element: Atomic # 1 Polarization: -8.04 SS G_CDS: -5.04 Total: -13.08 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -5.22 Total: -3.74 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -0.34 Total: 1.98 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.37 Total: -4.17 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.20 Total: -6.44 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.27 -11.08 -20.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.966 kcal (2) G-P(sol) polarization free energy of solvation -9.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds