Wall clock time and date at job start Mon Mar 8 2021 02:00:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.34460 * 126.48077 * 104.68821 * 4 2 1 6 6 N 1.36558 * 109.98373 * 179.83582 * 5 4 2 7 7 C 1.37832 * 109.86110 * 0.44217 * 6 5 4 8 8 C 1.38650 * 133.38470 * 179.76085 * 7 6 5 9 9 C 1.39316 * 119.66819 * 179.97438 * 8 7 6 10 10 C 1.47579 * 119.83260 * 179.97438 * 9 8 7 11 11 O 1.21592 * 119.99815 * 0.02562 * 10 9 8 12 12 N 1.34778 * 120.00041 * 180.02562 * 10 9 8 13 13 C 1.46499 * 119.99901 * 180.02562 * 12 10 9 14 14 H 1.08996 * 112.85069 * 334.66707 * 13 12 10 15 15 C 1.53786 * 113.61222 * 105.86134 * 13 12 10 16 16 C 1.54051 * 86.98476 * 89.16320 * 15 13 12 17 17 H 1.08998 * 113.61329 * 270.88657 * 16 15 13 18 18 C 1.50698 * 113.69670 * 139.98677 * 16 15 13 19 19 C 1.38231 * 119.99980 * 322.19421 * 18 16 15 20 20 C 1.38241 * 119.99717 * 179.76382 * 19 18 16 21 21 C 1.38237 * 120.00079 * 0.48451 * 20 19 18 22 22 C 1.38239 * 119.99879 * 359.79393 * 21 20 19 23 23 C 1.38230 * 119.99895 * 359.95197 * 22 21 20 24 24 C 1.53779 * 113.61596 * 203.46972 * 13 12 10 25 25 C 1.40203 * 120.33651 * 0.02562 * 9 8 7 26 26 C 1.36225 * 120.37833 * 0.02562 * 25 9 8 27 27 C 1.39878 * 119.95834 * 359.96792 * 26 25 9 28 28 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 29 29 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 30 30 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 31 31 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 32 32 H 1.08005 * 125.00501 * 359.97243 * 5 4 2 33 33 H 0.97004 * 125.07261 * 180.20871 * 6 5 4 34 34 H 1.08008 * 120.16449 * 0.02562 * 8 7 6 35 35 H 0.97002 * 119.99909 * 0.02562 * 12 10 9 36 36 H 1.09004 * 113.61299 * 203.66355 * 15 13 12 37 37 H 1.08996 * 113.61327 * 334.56602 * 15 13 12 38 38 H 1.07997 * 120.00485 * 359.97438 * 19 18 16 39 39 H 1.08000 * 119.99723 * 180.25109 * 20 19 18 40 40 H 1.07998 * 120.00010 * 179.76586 * 21 20 19 41 41 H 1.07993 * 119.99805 * 179.97438 * 22 21 20 42 42 H 1.08006 * 120.00103 * 180.02562 * 23 22 21 43 43 H 1.08997 * 113.61187 * 25.43070 * 24 13 12 44 44 H 1.08993 * 113.61408 * 156.33705 * 24 13 12 45 45 H 1.07999 * 119.80954 * 179.97438 * 25 9 8 46 46 H 1.08003 * 120.02371 * 180.02562 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.4565 -0.1361 -2.3268 6 7 2.8037 -1.0949 -3.2351 7 6 2.4950 -2.3434 -2.7393 8 6 2.6318 -3.6283 -3.2419 9 6 2.2143 -4.7158 -2.4777 10 6 2.3577 -6.0849 -3.0095 11 8 2.8396 -6.2617 -4.1117 12 7 1.9545 -7.1394 -2.2733 13 6 2.0973 -8.4986 -2.8009 14 1 2.1120 -8.5304 -3.8903 15 6 3.2369 -9.2970 -2.1459 16 6 2.2045 -9.7550 -1.0983 17 1 2.1274 -9.0873 -0.2403 18 6 2.3443 -11.2024 -0.7027 19 6 2.6783 -12.1494 -1.6526 20 6 2.8114 -13.4764 -1.2887 21 6 2.6006 -13.8578 0.0232 22 6 2.2609 -12.9116 0.9720 23 6 2.1330 -11.5839 0.6091 24 6 1.1272 -9.5102 -2.1681 25 6 1.6577 -4.5160 -1.2065 26 6 1.5187 -3.2569 -0.7055 27 6 1.9332 -2.1549 -1.4607 28 1 -0.3934 0.4417 0.7649 29 1 1.7923 -0.5138 0.8901 30 1 3.5346 1.7703 0.0322 31 1 1.5616 2.4678 -1.2086 32 1 2.5866 0.9268 -2.4675 33 1 3.2045 -0.9229 -4.1015 34 1 3.0606 -3.7853 -4.2207 35 1 1.5697 -6.9984 -1.3941 36 1 3.6161 -10.1074 -2.7685 37 1 4.0290 -8.6708 -1.7356 38 1 2.8387 -11.8522 -2.6784 39 1 3.0763 -14.2157 -2.0301 40 1 2.7008 -14.8951 0.3067 41 1 2.0958 -13.2097 1.9968 42 1 1.8680 -10.8446 1.3505 43 1 0.2174 -9.0559 -1.7757 44 1 0.9308 -10.3787 -2.7967 45 1 1.3365 -5.3651 -0.6216 46 1 1.0895 -3.1096 0.2746 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:00:48 Heat of formation + Delta-G solvation = 50.704179 kcal Electronic energy + Delta-G solvation = -28650.040158 eV Core-core repulsion = 24665.263671 eV Total energy + Delta-G solvation = -3984.776486 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.146 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.49648 -41.53556 -40.28987 -38.78882 -37.77102 -37.44401 -34.55145 -33.36385 -31.93697 -31.68391 -30.78174 -30.40666 -26.75488 -26.60313 -26.22613 -24.65647 -23.63755 -23.48740 -22.40834 -21.53931 -20.61784 -20.11288 -19.30690 -18.40311 -18.29562 -17.90197 -17.35069 -17.00434 -16.32739 -16.19815 -15.94673 -15.69743 -15.62364 -15.39851 -15.09241 -14.97844 -14.86473 -14.76669 -14.63094 -14.37091 -14.24404 -14.04470 -13.82695 -13.51993 -13.24288 -13.10838 -12.75053 -12.62531 -12.56715 -12.18483 -12.08878 -11.91581 -11.75761 -11.71533 -11.18204 -10.90585 -10.76559 -10.24241 -10.06255 -9.79594 -9.53944 -9.36225 -8.83203 -5.05568 -0.26922 0.38881 0.44972 0.52153 1.26079 1.31377 1.61714 1.84538 1.92247 2.00535 2.20143 2.84743 2.92602 3.42069 3.51011 3.56336 3.66867 3.67789 3.70408 3.78915 3.90234 3.98413 4.02535 4.07508 4.12749 4.20530 4.23000 4.26483 4.36583 4.45190 4.54843 4.56689 4.61727 4.67535 4.70625 4.72007 4.83254 4.93961 4.97897 4.99363 5.10422 5.13119 5.16999 5.23428 5.42164 5.44956 5.57354 5.58970 5.60690 5.65976 5.75062 5.97032 6.12091 6.33757 6.50374 6.68892 7.25172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.034 4.034 3 Si 0.684 3.316 4 C -0.164 4.164 5 C 0.072 3.928 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.055 4.055 9 C -0.121 4.121 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.709 5.709 13 C 0.120 3.880 14 H 0.106 0.894 15 C -0.144 4.144 16 C -0.074 4.074 17 H 0.097 0.903 18 C -0.071 4.071 19 C -0.117 4.117 20 C -0.118 4.118 21 C -0.124 4.124 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.135 4.135 25 C -0.113 4.113 26 C -0.070 4.070 27 C -0.062 4.062 28 H 0.379 0.621 29 H 0.071 0.929 30 H -0.256 1.256 31 H -0.254 1.254 32 H 0.170 0.830 33 H 0.423 0.577 34 H 0.137 0.863 35 H 0.401 0.599 36 H 0.096 0.904 37 H 0.075 0.925 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.121 0.879 42 H 0.120 0.880 43 H 0.077 0.923 44 H 0.099 0.901 45 H 0.127 0.873 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.173 2.331 5.055 5.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.145 4.145 3 Si 0.585 3.415 4 C -0.171 4.171 5 C -0.057 4.057 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.125 4.125 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.360 5.360 13 C 0.014 3.986 14 H 0.124 0.876 15 C -0.182 4.182 16 C -0.092 4.092 17 H 0.115 0.885 18 C -0.071 4.071 19 C -0.135 4.135 20 C -0.136 4.136 21 C -0.143 4.143 22 C -0.136 4.136 23 C -0.135 4.135 24 C -0.173 4.173 25 C -0.133 4.133 26 C -0.088 4.088 27 C -0.067 4.067 28 H 0.226 0.774 29 H 0.089 0.911 30 H -0.180 1.180 31 H -0.178 1.178 32 H 0.187 0.813 33 H 0.261 0.739 34 H 0.155 0.845 35 H 0.238 0.762 36 H 0.114 0.886 37 H 0.093 0.907 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.140 0.860 42 H 0.138 0.862 43 H 0.096 0.904 44 H 0.117 0.883 45 H 0.144 0.856 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.189 2.522 3.144 4.035 hybrid contribution 0.091 -0.398 -0.066 0.413 sum -0.098 2.125 3.078 3.742 Atomic orbital electron populations 1.86542 1.17582 1.81725 1.49441 1.23935 0.85264 1.09190 0.96104 0.95092 0.80862 0.77623 0.87923 1.19622 1.09522 0.91489 0.96468 1.21657 1.00567 0.94123 0.89329 1.41675 1.54691 1.03998 1.18159 1.18074 1.03220 0.86266 0.94836 1.20073 0.99445 0.87956 1.00157 1.19407 1.05010 0.92253 0.95833 1.18135 0.77350 0.84463 0.84554 1.90796 1.44194 1.86169 1.20171 1.45555 1.64228 1.05284 1.20962 1.21856 0.96466 0.80528 0.99706 0.87646 1.23615 0.96992 0.99975 0.97644 1.21645 0.97293 0.92887 0.97390 0.88505 1.19685 0.99214 0.94716 0.93533 1.21024 1.00221 0.92888 0.99377 1.21182 0.99828 0.96114 0.96434 1.21199 0.99943 0.99637 0.93471 1.21181 0.99602 0.93248 0.99587 1.21072 1.00481 0.96238 0.95699 1.23419 0.97165 0.99140 0.97569 1.20676 1.00585 0.97294 0.94724 1.20172 0.98635 0.90371 0.99665 1.19152 1.01010 0.92848 0.93664 0.77351 0.91095 1.18035 1.17817 0.81303 0.73949 0.84517 0.76245 0.88612 0.90656 0.85958 0.86018 0.86104 0.86050 0.86161 0.90413 0.88265 0.85563 0.85102 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.08 12.86 -35.23 -0.45 -0.53 16 2 C -0.03 0.01 3.05 36.00 0.11 0.12 16 3 Si 0.68 -1.25 30.80 -169.99 -5.24 -6.49 16 4 C -0.16 -0.37 5.60 -102.74 -0.58 -0.95 16 5 C 0.07 0.09 10.43 -16.78 -0.18 -0.09 16 6 N -0.58 -0.46 6.07 -10.68 -0.06 -0.52 16 7 C 0.08 0.23 7.26 -84.00 -0.61 -0.38 16 8 C -0.06 -0.16 9.61 -39.03 -0.37 -0.54 16 9 C -0.12 -0.30 5.87 -104.95 -0.62 -0.92 16 10 C 0.57 1.88 7.76 -12.45 -0.10 1.79 16 11 O -0.54 -3.68 15.93 5.28 0.08 -3.60 16 12 N -0.71 -0.20 5.21 -54.04 -0.28 -0.49 16 13 C 0.12 0.02 4.30 -67.12 -0.29 -0.27 16 14 H 0.11 0.19 7.50 -51.93 -0.39 -0.20 16 15 C -0.14 0.03 7.27 -25.77 -0.19 -0.15 16 16 C -0.07 0.08 3.87 -90.82 -0.35 -0.27 16 17 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 18 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 19 C -0.12 -0.07 8.60 -39.58 -0.34 -0.41 16 20 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 21 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 22 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 23 C -0.12 -0.07 9.71 -39.58 -0.38 -0.45 16 24 C -0.13 0.18 7.29 -25.92 -0.19 -0.01 16 25 C -0.11 -0.07 9.46 -39.57 -0.37 -0.44 16 26 C -0.07 -0.10 10.03 -39.69 -0.40 -0.50 16 27 C -0.06 -0.19 6.35 -105.04 -0.67 -0.85 16 28 H 0.38 -1.89 8.74 45.56 0.40 -1.49 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 30 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 31 H -0.25 -0.20 7.04 56.52 0.40 0.19 16 32 H 0.17 -0.14 6.31 -52.48 -0.33 -0.47 16 33 H 0.42 -0.91 8.96 -40.82 -0.37 -1.28 16 34 H 0.14 0.36 7.62 -52.48 -0.40 -0.04 16 35 H 0.40 -0.88 6.69 -40.82 -0.27 -1.15 16 36 H 0.10 -0.05 6.34 -51.93 -0.33 -0.38 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.12 -0.09 6.68 -52.49 -0.35 -0.44 16 39 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 40 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 42 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 44 H 0.10 -0.14 7.71 -51.93 -0.40 -0.54 16 45 H 0.13 -0.31 6.36 -52.49 -0.33 -0.64 16 46 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 LS Contribution 382.44 15.07 5.76 5.76 Total: 0.00 -9.91 382.44 -13.22 -23.13 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -5.77 Total: -10.89 kcal Atomic # 6 Polarization: 0.88 SS G_CDS: -7.27 Total: -6.39 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.35 Total: -1.01 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.37 Total: -4.13 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.24 Total: -6.49 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -9.91 -13.22 -23.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.834 kcal (2) G-P(sol) polarization free energy of solvation -9.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.130 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds