Wall clock time and date at job start Mon Mar 8 2021 02:01:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.37941 * 119.91944 * 64.72054 * 4 2 1 6 6 C 1.39600 * 119.87077 * 179.74989 * 5 4 2 7 7 C 1.47846 * 120.14268 * 180.29626 * 6 5 4 8 8 O 1.21553 * 119.99514 * 0.23430 * 7 6 5 9 9 N 1.34777 * 120.00339 * 180.23375 * 7 6 5 10 10 C 1.46501 * 120.00087 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84731 * 23.79540 * 10 9 7 12 12 C 1.53774 * 113.61478 * 155.00015 * 10 9 7 13 13 C 1.53777 * 87.08478 * 89.11187 * 12 10 9 14 14 H 1.09002 * 113.61240 * 270.88470 * 13 12 10 15 15 C 1.50701 * 113.61787 * 139.97844 * 13 12 10 16 16 C 1.38231 * 119.99929 * 299.73240 * 15 13 12 17 17 C 1.38240 * 120.00145 * 179.78348 * 16 15 13 18 18 C 1.38233 * 119.99474 * 0.44064 * 17 16 15 19 19 C 1.38235 * 120.00616 * 359.81303 * 18 17 16 20 20 C 1.38234 * 119.99985 * 120.00087 * 15 13 12 21 21 C 1.53784 * 113.61108 * 252.49670 * 10 9 7 22 22 C 1.39550 * 119.72056 * 0.52957 * 6 5 4 23 23 C 1.38076 * 119.83874 * 359.74900 * 22 6 5 24 24 Br 1.89098 * 119.93464 * 180.02562 * 23 22 6 25 25 C 1.38367 * 119.92112 * 245.00350 * 4 2 1 26 26 H 0.96699 * 114.00604 * 59.99761 * 1 2 3 27 27 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 28 28 H 1.48501 * 110.00188 * 298.68297 * 3 2 1 29 29 H 1.48498 * 110.00005 * 60.00258 * 3 2 1 30 30 H 1.08000 * 120.06632 * 0.02860 * 5 4 2 31 31 H 0.97007 * 119.99661 * 359.97438 * 9 7 6 32 32 H 1.09000 * 113.61596 * 203.66420 * 12 10 9 33 33 H 1.08999 * 113.61487 * 334.47459 * 12 10 9 34 34 H 1.08003 * 120.00148 * 359.97438 * 16 15 13 35 35 H 1.07997 * 120.00050 * 180.27215 * 17 16 15 36 36 H 1.08002 * 119.99755 * 179.83166 * 18 17 16 37 37 H 1.07992 * 120.00431 * 180.02562 * 19 18 17 38 38 H 1.07999 * 119.99897 * 359.97438 * 20 15 13 39 39 H 1.09002 * 113.61205 * 25.42609 * 21 10 9 40 40 H 1.08999 * 113.61419 * 156.33285 * 21 10 9 41 41 H 1.08000 * 120.07841 * 179.72513 * 22 6 5 42 42 H 1.07996 * 119.86001 * 359.95268 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6794 -2.0561 1.3990 6 6 2.1498 -2.7143 2.5367 7 6 1.8888 -4.1580 2.7203 8 8 1.2671 -4.7751 1.8776 9 7 2.3402 -4.7896 3.8220 10 6 2.0821 -6.2202 4.0037 11 1 1.9049 -6.7412 3.0627 12 6 3.1061 -6.9205 4.9123 13 6 2.1932 -6.5513 6.0934 14 1 2.4157 -5.5774 6.5295 15 6 2.0708 -7.6423 7.1258 16 6 1.5609 -8.8768 6.7698 17 6 1.4528 -9.8790 7.7158 18 6 1.8461 -9.6436 9.0199 19 6 2.3511 -8.4074 9.3773 20 6 2.4632 -7.4067 8.4302 21 6 1.0320 -6.5242 5.0854 22 6 2.8632 -2.0029 3.5023 23 6 3.1037 -0.6550 3.3244 24 35 4.0707 0.3115 4.6307 25 6 2.6392 -0.0100 2.1911 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5878 2.4586 -1.2242 29 1 1.5614 2.4679 1.2085 30 1 1.1232 -2.6004 0.6502 31 1 2.8366 -4.2971 4.4943 32 1 3.1824 -7.9938 4.7382 33 1 4.0771 -6.4259 4.9380 34 1 1.2498 -9.0594 5.7518 35 1 1.0585 -10.8449 7.4366 36 1 1.7591 -10.4257 9.7597 37 1 2.6588 -8.2237 10.3960 38 1 2.8579 -6.4409 8.7092 39 1 0.3282 -5.7087 5.2520 40 1 0.5412 -7.4891 4.9585 41 1 3.2259 -2.5054 4.3868 42 1 2.8305 1.0442 2.0560 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:01:15 Heat of formation + Delta-G solvation = 20.865978 kcal Electronic energy + Delta-G solvation = -26006.860827 eV Core-core repulsion = 22158.388267 eV Total energy + Delta-G solvation = -3848.472560 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.046 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.84216 -40.98368 -39.85296 -38.66443 -37.81719 -34.84055 -33.68436 -33.09067 -31.87346 -31.47774 -30.49528 -27.12756 -26.81031 -26.56559 -25.05083 -23.53395 -22.71832 -22.45898 -21.58565 -20.21100 -18.94250 -18.67709 -18.11274 -17.57004 -17.40004 -16.73337 -16.30889 -16.19020 -16.07996 -15.97480 -15.44473 -15.17173 -15.04645 -14.83494 -14.54501 -14.39976 -14.22553 -14.07100 -14.02873 -13.70850 -13.55992 -13.13498 -12.83104 -12.77488 -12.43094 -12.22010 -11.99714 -11.86117 -11.80129 -11.76027 -11.49950 -11.23572 -11.05668 -10.65902 -10.33343 -10.12146 -9.91453 -9.81844 -9.56671 -5.09540 -0.50116 -0.16980 0.39774 0.42471 0.49889 1.10482 1.46787 1.57126 1.82436 1.92721 2.46929 2.82426 3.05948 3.31721 3.38838 3.49251 3.61125 3.64703 3.74385 3.84701 3.86645 3.96476 3.99209 4.07922 4.10420 4.16990 4.24001 4.25736 4.42235 4.51935 4.57654 4.63730 4.66081 4.72514 4.76039 4.88425 4.92679 4.93826 5.03830 5.09444 5.10047 5.14445 5.36189 5.47485 5.57545 5.63830 5.71600 6.09742 6.30431 6.33410 7.07422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.076 4.076 3 Si 0.678 3.322 4 C -0.072 4.072 5 C -0.016 4.016 6 C -0.128 4.128 7 C 0.566 3.434 8 O -0.525 6.525 9 N -0.708 5.708 10 C 0.119 3.881 11 H 0.108 0.892 12 C -0.135 4.135 13 C -0.074 4.074 14 H 0.097 0.903 15 C -0.072 4.072 16 C -0.117 4.117 17 C -0.117 4.117 18 C -0.124 4.124 19 C -0.118 4.118 20 C -0.117 4.117 21 C -0.144 4.144 22 C -0.053 4.053 23 C -0.094 4.094 24 Br -0.032 7.032 25 C -0.061 4.061 26 H 0.384 0.616 27 H 0.084 0.916 28 H -0.255 1.255 29 H -0.250 1.250 30 H 0.147 0.853 31 H 0.401 0.599 32 H 0.100 0.900 33 H 0.077 0.923 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.120 0.880 39 H 0.075 0.925 40 H 0.097 0.903 41 H 0.138 0.862 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.560 0.666 0.351 3.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.579 3.421 4 C -0.073 4.073 5 C -0.035 4.035 6 C -0.132 4.132 7 C 0.353 3.647 8 O -0.401 6.401 9 N -0.360 5.360 10 C 0.014 3.986 11 H 0.126 0.874 12 C -0.173 4.173 13 C -0.092 4.092 14 H 0.115 0.885 15 C -0.072 4.072 16 C -0.135 4.135 17 C -0.135 4.135 18 C -0.142 4.142 19 C -0.136 4.136 20 C -0.135 4.135 21 C -0.183 4.183 22 C -0.074 4.074 23 C -0.174 4.174 24 Br 0.054 6.946 25 C -0.081 4.081 26 H 0.232 0.768 27 H 0.102 0.898 28 H -0.179 1.179 29 H -0.175 1.175 30 H 0.165 0.835 31 H 0.237 0.763 32 H 0.118 0.882 33 H 0.096 0.904 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.094 0.906 40 H 0.115 0.885 41 H 0.156 0.844 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 3.356 1.104 0.788 3.620 hybrid contribution -1.075 -0.127 -0.255 1.112 sum 2.281 0.977 0.532 2.538 Atomic orbital electron populations 1.86588 1.17239 1.80250 1.50018 1.24772 0.84969 1.11091 0.97705 0.95117 0.91566 0.74453 0.81005 1.19207 0.98814 0.93687 0.95587 1.21273 0.93321 0.93180 0.95701 1.19909 1.02807 0.93678 0.96839 1.18080 0.78839 0.86322 0.81503 1.90820 1.39641 1.67054 1.42610 1.45574 1.57605 1.09981 1.22814 1.21897 0.96491 0.80745 0.99484 0.87377 1.23426 0.97782 1.01939 0.94125 1.21600 0.97478 0.97277 0.92879 0.88522 1.19669 0.98744 0.94675 0.94128 1.21023 0.99867 0.92939 0.99681 1.21183 0.99750 0.99171 0.93438 1.21203 0.99218 0.97276 0.96508 1.21186 0.99382 0.93515 0.99523 1.21072 1.00299 0.99321 0.92778 1.23579 0.96605 1.03270 0.94804 1.21269 0.95552 0.92334 0.98240 1.21590 1.04211 0.95028 0.96526 1.96838 1.72245 1.73680 1.51887 1.21195 0.95367 1.00063 0.91467 0.76761 0.89773 1.17928 1.17464 0.83506 0.76345 0.88175 0.90389 0.85942 0.85992 0.86086 0.86037 0.86167 0.90630 0.88468 0.84381 0.84018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.31 12.80 -35.23 -0.45 -0.76 16 2 C -0.08 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.68 -1.11 29.84 -169.99 -5.07 -6.18 16 4 C -0.07 -0.03 5.38 -104.68 -0.56 -0.60 16 5 C -0.02 -0.02 9.22 -39.18 -0.36 -0.38 16 6 C -0.13 -0.12 5.87 -104.97 -0.62 -0.74 16 7 C 0.57 1.16 7.77 -12.33 -0.10 1.07 16 8 O -0.52 -3.01 15.95 5.32 0.08 -2.92 16 9 N -0.71 0.53 5.21 -53.96 -0.28 0.25 16 10 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 11 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 12 C -0.13 0.27 7.29 -25.92 -0.19 0.09 16 13 C -0.07 0.11 3.86 -90.96 -0.35 -0.24 16 14 H 0.10 -0.23 8.10 -51.93 -0.42 -0.65 16 15 C -0.07 -0.01 5.29 -104.63 -0.55 -0.56 16 16 C -0.12 -0.03 8.62 -39.58 -0.34 -0.37 16 17 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 18 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 19 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 20 C -0.12 -0.04 9.71 -39.58 -0.38 -0.42 16 21 C -0.14 0.12 7.25 -25.91 -0.19 -0.07 16 22 C -0.05 0.04 9.28 -39.15 -0.36 -0.32 16 23 C -0.09 0.01 6.22 -39.58 -0.25 -0.23 16 24 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 25 C -0.06 0.01 8.40 -39.47 -0.33 -0.33 16 26 H 0.38 -1.31 8.74 45.56 0.40 -0.91 16 27 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 28 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 29 H -0.25 -0.33 7.05 56.52 0.40 0.07 16 30 H 0.15 0.30 7.65 -52.49 -0.40 -0.10 16 31 H 0.40 -1.27 6.74 -40.82 -0.27 -1.55 16 32 H 0.10 -0.20 7.73 -51.93 -0.40 -0.60 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.12 -0.14 6.64 -52.48 -0.35 -0.49 16 35 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 36 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 37 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 40 H 0.10 -0.10 6.30 -51.93 -0.33 -0.43 16 41 H 0.14 -0.45 6.40 -52.49 -0.34 -0.78 16 42 H 0.14 -0.19 4.85 -52.49 -0.25 -0.45 16 LS Contribution 370.16 15.07 5.58 5.58 Total: 0.00 -7.46 370.16 -13.31 -20.76 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -4.90 Total: -9.76 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -5.97 Total: -4.69 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.28 Total: 0.25 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.37 Total: -3.68 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.07 Total: -6.18 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.46 -13.31 -20.76 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.627 kcal (2) G-P(sol) polarization free energy of solvation -7.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.761 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds