Wall clock time and date at job start Mon Mar 8 2021 02:01:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.39278 * 121.03024 * 2 1 4 4 C 1.46499 * 134.20720 * 359.97438 * 3 2 1 5 5 C 1.50706 * 126.59635 * 359.97438 * 4 3 2 6 6 O 1.42896 * 109.46847 * 284.99965 * 5 4 3 7 7 Si 1.86298 * 109.47111 * 164.99924 * 5 4 3 8 8 C 1.34172 * 106.80511 * 180.02562 * 4 3 2 9 9 N 1.36954 * 109.95284 * 359.97438 * 8 4 3 10 10 C 1.37153 * 110.11406 * 0.02562 * 9 8 4 11 11 N 1.32820 * 132.96596 * 180.02562 * 10 9 8 12 12 C 1.31302 * 121.88806 * 179.72455 * 11 10 9 13 13 C 1.39749 * 121.02959 * 179.97438 * 2 1 3 14 14 C 1.47670 * 120.45164 * 0.02562 * 13 2 1 15 15 O 1.21573 * 120.00355 * 354.19409 * 14 13 2 16 16 N 1.34775 * 119.99603 * 174.19277 * 14 13 2 17 17 C 1.46505 * 120.00037 * 179.97438 * 16 14 13 18 18 H 1.08996 * 112.90353 * 23.75371 * 17 16 14 19 19 C 1.53782 * 113.61514 * 154.99823 * 17 16 14 20 20 C 1.53783 * 87.07657 * 89.11733 * 19 17 16 21 21 H 1.08998 * 113.62036 * 270.88252 * 20 19 17 22 22 C 1.50704 * 113.61110 * 139.97693 * 20 19 17 23 23 C 1.38229 * 120.00473 * 299.72920 * 22 20 19 24 24 C 1.38233 * 120.00099 * 179.76779 * 23 22 20 25 25 C 1.38232 * 119.99950 * 0.48083 * 24 23 22 26 26 C 1.38228 * 119.99974 * 359.79349 * 25 24 23 27 27 C 1.38231 * 120.00229 * 359.95581 * 26 25 24 28 28 C 1.53778 * 87.08347 * 25.43485 * 20 19 17 29 29 H 1.09005 * 109.46642 * 263.79007 * 1 2 3 30 30 H 1.08999 * 109.46774 * 23.78162 * 1 2 3 31 31 H 1.08990 * 109.47296 * 143.78750 * 1 2 3 32 32 H 1.08995 * 109.46726 * 44.99707 * 5 4 3 33 33 H 0.96698 * 113.99924 * 179.97438 * 6 5 4 34 34 H 1.48500 * 109.99964 * 59.99696 * 7 5 4 35 35 H 1.48502 * 109.99947 * 181.31819 * 7 5 4 36 36 H 1.08002 * 125.02340 * 180.02562 * 8 4 3 37 37 H 0.96996 * 124.94318 * 180.02562 * 9 8 4 38 38 H 1.08006 * 119.30952 * 180.28048 * 12 11 10 39 39 H 0.97002 * 120.00514 * 0.02562 * 16 14 13 40 40 H 1.08991 * 113.61298 * 203.66567 * 19 17 16 41 41 H 1.08993 * 113.61446 * 334.57474 * 19 17 16 42 42 H 1.08000 * 119.99999 * 0.02562 * 23 22 20 43 43 H 1.08008 * 120.00015 * 180.25755 * 24 23 22 44 44 H 1.08005 * 120.00115 * 179.77136 * 25 24 23 45 45 H 1.08009 * 120.00178 * 179.97438 * 26 25 24 46 46 H 1.07999 * 120.00123 * 179.97438 * 27 26 25 47 47 H 1.09003 * 113.61353 * 220.01921 * 28 20 19 48 48 H 1.08996 * 113.61848 * 89.11139 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6101 -0.0005 5 6 0.4528 3.1706 -0.0017 6 8 -0.1179 3.0239 -1.3035 7 14 0.5070 4.9765 0.4528 8 6 2.9949 3.3125 -0.0008 9 7 4.0670 2.4603 0.0000 10 6 3.6349 1.1587 0.0003 11 7 4.2721 -0.0067 0.0015 12 6 3.6267 -1.1501 0.0069 13 6 2.2274 -1.1975 0.0005 14 6 1.5224 -2.4950 0.0005 15 8 0.3118 -2.5291 0.1066 16 7 2.2211 -3.6415 -0.1170 17 6 1.5217 -4.9289 -0.1165 18 1 0.4799 -4.8458 -0.4259 19 6 2.2911 -6.0482 -0.8377 20 6 2.9605 -6.3508 0.5134 21 1 3.8742 -5.7818 0.6852 22 6 3.1258 -7.8232 0.7887 23 6 2.0151 -8.6438 0.8513 24 6 2.1672 -9.9952 1.0991 25 6 3.4293 -10.5243 1.2942 26 6 4.5395 -9.7028 1.2373 27 6 4.3879 -8.3524 0.9844 28 6 1.7176 -5.7358 1.1779 29 1 -0.3633 -0.1112 1.0217 30 1 -0.3633 0.9404 -0.4144 31 1 -0.3633 -0.8291 -0.6071 32 1 -0.1553 2.6312 0.7245 33 1 -1.0202 3.3637 -1.3779 34 1 1.3332 5.7229 -0.5298 35 1 -0.8693 5.5333 0.4862 36 1 3.0600 4.3906 -0.0007 37 1 4.9967 2.7371 0.0004 38 1 4.1869 -2.0735 0.0122 39 1 3.1871 -3.6144 -0.2013 40 1 1.6525 -6.8542 -1.1988 41 1 2.9837 -5.6834 -1.5960 42 1 1.0288 -8.2297 0.7024 43 1 1.2997 -10.6370 1.1438 44 1 3.5478 -11.5796 1.4915 45 1 5.5256 -10.1162 1.3902 46 1 5.2553 -7.7105 0.9403 47 1 1.9472 -5.1187 2.0466 48 1 0.9221 -6.4564 1.3677 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:01:54 Heat of formation + Delta-G solvation = 67.688845 kcal Electronic energy + Delta-G solvation = -31447.318342 eV Core-core repulsion = 27242.314836 eV Total energy + Delta-G solvation = -4205.003506 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.157 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.85974 -41.58125 -40.45750 -39.03461 -38.45690 -37.83607 -35.22890 -34.60653 -32.13525 -31.92333 -31.70632 -30.71076 -28.90579 -26.67769 -26.62520 -26.04009 -24.69572 -24.02274 -23.46637 -22.41542 -21.99354 -20.39005 -20.11370 -19.26994 -18.74879 -18.48876 -17.95096 -17.55482 -17.14861 -16.74058 -16.47487 -16.12086 -16.10764 -15.83306 -15.58809 -15.31669 -15.08819 -15.01517 -14.70948 -14.55925 -14.25857 -14.11506 -14.06645 -13.98645 -13.74427 -13.58675 -13.42783 -13.30163 -13.07038 -12.95554 -12.68100 -12.66762 -12.12085 -11.99515 -11.69375 -11.65400 -11.18581 -11.13550 -11.11358 -10.52532 -10.26965 -10.12734 -9.78913 -9.63070 -9.51809 -9.13842 -4.85537 -0.35621 -0.08621 0.46115 0.52949 1.32880 1.39676 1.61709 1.70226 1.77859 1.99954 2.02203 2.74374 2.86548 3.29703 3.36528 3.49843 3.58673 3.67183 3.68317 3.73586 3.78328 3.80165 3.97758 4.09200 4.12384 4.16635 4.18101 4.27625 4.31322 4.33906 4.44324 4.58700 4.61232 4.65886 4.69172 4.71959 4.76067 4.80132 4.87605 4.95678 5.02901 5.04719 5.14171 5.16356 5.21116 5.21744 5.25639 5.39664 5.57294 5.62269 5.67202 5.72329 5.78251 6.15617 6.20865 6.46520 6.65320 6.81849 7.15910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C 0.063 3.937 3 C -0.167 4.167 4 C -0.160 4.160 5 C -0.061 4.061 6 O -0.558 6.558 7 Si 0.776 3.224 8 C 0.088 3.912 9 N -0.560 5.560 10 C 0.289 3.711 11 N -0.515 5.515 12 C 0.180 3.820 13 C -0.241 4.241 14 C 0.574 3.426 15 O -0.563 6.563 16 N -0.696 5.696 17 C 0.119 3.881 18 H 0.089 0.911 19 C -0.125 4.125 20 C -0.067 4.067 21 H 0.111 0.889 22 C -0.078 4.078 23 C -0.128 4.128 24 C -0.131 4.131 25 C -0.139 4.139 26 C -0.131 4.131 27 C -0.128 4.128 28 C -0.142 4.142 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.081 0.919 32 H 0.080 0.920 33 H 0.392 0.608 34 H -0.277 1.277 35 H -0.290 1.290 36 H 0.217 0.783 37 H 0.439 0.561 38 H 0.195 0.805 39 H 0.413 0.587 40 H 0.099 0.901 41 H 0.087 0.913 42 H 0.132 0.868 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.133 0.867 46 H 0.135 0.865 47 H 0.068 0.932 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.361 2.190 2.174 4.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.054 3.946 3 C -0.174 4.174 4 C -0.167 4.167 5 C -0.169 4.169 6 O -0.368 6.368 7 Si 0.679 3.321 8 C -0.039 4.039 9 N -0.166 5.166 10 C 0.055 3.945 11 N -0.228 5.228 12 C 0.012 3.988 13 C -0.248 4.248 14 C 0.363 3.637 15 O -0.443 6.443 16 N -0.348 5.348 17 C 0.013 3.987 18 H 0.107 0.893 19 C -0.163 4.163 20 C -0.085 4.085 21 H 0.129 0.871 22 C -0.078 4.078 23 C -0.145 4.145 24 C -0.149 4.149 25 C -0.157 4.157 26 C -0.149 4.149 27 C -0.146 4.146 28 C -0.180 4.180 29 H 0.099 0.901 30 H 0.099 0.901 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.242 0.758 34 H -0.204 1.204 35 H -0.217 1.217 36 H 0.233 0.767 37 H 0.280 0.720 38 H 0.211 0.789 39 H 0.251 0.749 40 H 0.117 0.883 41 H 0.105 0.895 42 H 0.149 0.851 43 H 0.150 0.850 44 H 0.149 0.851 45 H 0.151 0.849 46 H 0.153 0.847 47 H 0.086 0.914 48 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 3.948 2.868 1.873 5.227 hybrid contribution -0.997 -0.552 -0.839 1.415 sum 2.951 2.316 1.034 3.891 Atomic orbital electron populations 1.21093 0.89247 1.03957 1.03347 1.20076 0.97271 0.90023 0.87198 1.19753 0.93371 0.94334 1.09954 1.19722 0.94482 0.90059 1.12456 1.24482 0.91573 1.13366 0.87456 1.86594 1.34939 1.84424 1.30804 0.94119 0.80406 0.70481 0.87143 1.22235 0.84169 0.97104 1.00378 1.41564 1.10511 1.01761 1.62797 1.18762 0.89495 0.86828 0.99410 1.66513 1.40801 0.96400 1.19105 1.22972 0.89725 0.95277 0.90847 1.20486 0.95436 0.93301 1.15596 1.17958 0.86449 0.83857 0.75474 1.90735 1.15002 1.87473 1.51117 1.45430 1.11059 1.04363 1.73930 1.21838 0.97345 0.81961 0.97534 0.89285 1.23370 0.99370 0.97240 0.96356 1.21605 0.98838 0.91334 0.96690 0.87078 1.19879 0.93216 0.95556 0.99168 1.21231 0.99124 0.93693 1.00501 1.21421 0.97984 0.95758 0.99745 1.21436 0.93001 1.00697 1.00548 1.21437 0.99490 0.94171 0.99801 1.21334 0.97436 0.95668 1.00128 1.23546 0.98209 0.98983 0.97275 0.90142 0.90051 0.90073 0.90161 0.75801 1.20379 1.21690 0.76704 0.71982 0.78880 0.74915 0.88263 0.89456 0.85067 0.85020 0.85118 0.84905 0.84722 0.91351 0.88591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.95 8.46 71.24 0.60 -0.35 16 2 C 0.06 0.53 5.98 -19.25 -0.12 0.42 16 3 C -0.17 -1.21 6.16 -20.19 -0.12 -1.33 16 4 C -0.16 -0.43 5.61 -18.64 -0.10 -0.53 16 5 C -0.06 0.02 1.87 71.24 0.13 0.15 16 6 O -0.56 -1.46 11.65 -148.98 -1.73 -3.20 16 7 Si 0.78 -3.68 30.80 68.60 2.11 -1.56 16 8 C 0.09 -0.21 10.44 82.97 0.87 0.65 16 9 N -0.56 0.58 6.04 -192.24 -1.16 -0.58 16 10 C 0.29 1.65 8.42 134.03 1.13 2.78 16 11 N -0.51 -2.93 10.37 -191.74 -1.99 -4.92 16 12 C 0.18 0.43 10.67 85.20 0.91 1.34 16 13 C -0.24 -1.44 5.89 -19.99 -0.12 -1.55 16 14 C 0.57 3.59 7.72 86.74 0.67 4.26 16 15 O -0.56 -7.25 13.09 -3.94 -0.05 -7.30 16 16 N -0.70 0.49 5.21 -443.07 -2.31 -1.82 16 17 C 0.12 -0.07 4.32 45.52 0.20 0.13 16 18 H 0.09 0.32 7.46 -2.39 -0.02 0.30 16 19 C -0.13 0.49 7.29 31.12 0.23 0.72 16 20 C -0.07 0.23 3.86 -11.01 -0.04 0.19 16 21 H 0.11 -0.69 8.10 -2.39 -0.02 -0.71 16 22 C -0.08 -0.01 5.29 -19.86 -0.11 -0.12 16 23 C -0.13 -0.11 8.62 22.27 0.19 0.08 16 24 C -0.13 -0.20 10.05 22.27 0.22 0.03 16 25 C -0.14 -0.23 10.05 22.27 0.22 0.00 16 26 C -0.13 -0.16 10.05 22.27 0.22 0.07 16 27 C -0.13 -0.06 9.71 22.27 0.22 0.15 16 28 C -0.14 0.20 7.25 31.12 0.23 0.42 16 29 H 0.08 0.58 8.14 -2.38 -0.02 0.56 16 30 H 0.08 0.51 4.79 -2.39 -0.01 0.50 16 31 H 0.08 0.92 5.94 -2.39 -0.01 0.91 16 32 H 0.08 -0.14 7.13 -2.39 -0.02 -0.16 16 33 H 0.39 -2.02 8.74 -74.06 -0.65 -2.67 16 34 H -0.28 0.17 7.04 99.48 0.70 0.87 16 35 H -0.29 -0.16 7.11 99.48 0.71 0.54 16 36 H 0.22 -2.12 6.31 -2.91 -0.02 -2.14 16 37 H 0.44 -3.02 8.96 -92.71 -0.83 -3.85 16 38 H 0.19 -1.17 6.43 -2.91 -0.02 -1.19 16 39 H 0.41 -2.72 6.78 -92.71 -0.63 -3.35 16 40 H 0.10 -0.35 7.73 -2.39 -0.02 -0.37 16 41 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 42 H 0.13 -0.23 6.64 -2.91 -0.02 -0.25 16 43 H 0.13 -0.20 8.06 -2.91 -0.02 -0.23 16 44 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 45 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 46 H 0.13 -0.43 8.06 -2.91 -0.02 -0.46 16 47 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 48 H 0.10 -0.14 6.30 -2.39 -0.02 -0.15 16 Total: 0.00 -24.00 386.98 -0.72 -24.72 By element: Atomic # 1 Polarization: -11.82 SS G_CDS: -1.02 Total: -12.84 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: 5.43 Total: 7.50 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -5.46 Total: -7.32 kcal Atomic # 8 Polarization: -8.71 SS G_CDS: -1.79 Total: -10.50 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.11 Total: -1.56 kcal Total: -24.00 -0.72 -24.72 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.411 kcal (2) G-P(sol) polarization free energy of solvation -23.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.722 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds