Wall clock time and date at job start Mon Mar 8 2021 02:02:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86297 * 109.47080 * 2 1 4 4 C 1.50707 * 109.46854 * 119.99573 * 2 1 3 5 5 C 1.34850 * 125.89880 * 218.33443 * 4 2 1 6 6 C 1.40944 * 107.46726 * 180.24519 * 5 4 2 7 7 C 1.34851 * 107.46569 * 359.76673 * 6 5 4 8 8 N 1.36562 * 108.20130 * 0.02562 * 7 6 5 9 9 C 1.40202 * 125.66765 * 179.97438 * 8 7 6 10 10 C 1.38834 * 120.06322 * 56.09021 * 9 8 7 11 11 C 1.38121 * 119.93229 * 179.72401 * 10 9 8 12 12 C 1.38285 * 120.06711 * 0.25257 * 11 10 9 13 13 C 1.50690 * 119.93362 * 180.02562 * 12 11 10 14 14 C 1.50705 * 109.47356 * 89.99999 * 13 12 11 15 15 O 1.21283 * 119.99632 * 359.97438 * 14 13 12 16 16 N 1.34778 * 120.00390 * 180.02562 * 14 13 12 17 17 C 1.46500 * 119.99646 * 179.97438 * 16 14 13 18 18 H 1.08997 * 112.85461 * 334.66494 * 17 16 14 19 19 C 1.53786 * 113.60978 * 105.86915 * 17 16 14 20 20 C 1.54051 * 86.99008 * 89.15570 * 19 17 16 21 21 H 1.08997 * 113.68792 * 270.87353 * 20 19 17 22 22 C 1.50694 * 113.61684 * 139.97517 * 20 19 17 23 23 C 1.38233 * 120.00484 * 322.23119 * 22 20 19 24 24 C 1.38235 * 120.00079 * 179.79136 * 23 22 20 25 25 C 1.38235 * 120.00120 * 0.43789 * 24 23 22 26 26 C 1.38234 * 119.99814 * 359.81514 * 25 24 23 27 27 C 1.38233 * 120.00000 * 359.97438 * 26 25 24 28 28 C 1.53783 * 87.07558 * 25.42672 * 20 19 17 29 29 C 1.38279 * 120.12909 * 359.97438 * 12 11 10 30 30 C 1.38123 * 120.06844 * 0.02562 * 29 12 11 31 31 H 0.96698 * 114.00822 * 305.22505 * 1 2 3 32 32 H 1.09000 * 109.47427 * 239.99575 * 2 1 3 33 33 H 1.48499 * 109.99749 * 299.99423 * 3 2 1 34 34 H 1.48495 * 110.00256 * 61.31285 * 3 2 1 35 35 H 1.07999 * 126.26894 * 0.04502 * 5 4 2 36 36 H 1.08002 * 126.26464 * 179.74021 * 6 5 4 37 37 H 1.08004 * 125.89900 * 179.97438 * 7 6 5 38 38 H 1.07999 * 120.03413 * 359.97438 * 10 9 8 39 39 H 1.07996 * 119.96999 * 180.27246 * 11 10 9 40 40 H 1.09006 * 109.47182 * 209.99492 * 13 12 11 41 41 H 1.08992 * 109.47598 * 329.99922 * 13 12 11 42 42 H 0.96998 * 119.99797 * 359.97438 * 16 14 13 43 43 H 1.09005 * 113.60664 * 203.66140 * 19 17 16 44 44 H 1.08994 * 113.61276 * 334.55580 * 19 17 16 45 45 H 1.08007 * 119.99744 * 0.02562 * 23 22 20 46 46 H 1.08004 * 119.99959 * 180.27655 * 24 23 22 47 47 H 1.08000 * 120.00390 * 179.83642 * 25 24 23 48 48 H 1.08002 * 119.99764 * 179.97438 * 26 25 24 49 49 H 1.08000 * 120.00089 * 179.97438 * 27 26 25 50 50 H 1.08997 * 113.61683 * 220.02035 * 28 20 19 51 51 H 1.09007 * 113.68706 * 89.13263 * 28 20 19 52 52 H 1.07998 * 119.96665 * 179.97438 * 29 12 11 53 53 H 1.07994 * 120.03496 * 180.02562 * 30 29 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 3.0026 -0.3535 1.9676 6 6 3.1221 -1.2847 3.0189 7 6 2.1162 -2.1734 2.8886 8 7 1.3787 -1.8253 1.7933 9 6 0.2454 -2.5028 1.3219 10 6 -0.8411 -2.7089 2.1614 11 6 -1.9584 -3.3717 1.6924 12 6 -1.9936 -3.8345 0.3898 13 6 -3.2144 -4.5567 -0.1189 14 6 -4.1765 -3.5604 -0.7130 15 8 -3.8982 -2.3800 -0.7220 16 7 -5.3464 -3.9810 -1.2334 17 6 -6.2817 -3.0122 -1.8104 18 1 -6.1644 -2.0114 -1.3951 19 6 -6.3272 -3.0402 -3.3474 20 6 -7.4307 -4.1068 -3.2144 21 1 -7.0502 -5.1272 -3.1689 22 6 -8.5510 -3.9437 -4.2090 23 6 -8.9909 -2.6793 -4.5535 24 6 -10.0157 -2.5296 -5.4691 25 6 -10.6067 -3.6446 -6.0335 26 6 -10.1703 -4.9091 -5.6850 27 6 -9.1426 -5.0587 -4.7727 28 6 -7.7392 -3.5024 -1.8344 29 6 -0.9112 -3.6349 -0.4472 30 6 0.2090 -2.9728 0.0161 31 1 -0.3934 0.5095 0.7216 32 1 1.7923 -0.5139 -0.8899 33 1 1.5615 2.4678 -1.2086 34 1 1.5877 2.4586 1.2241 35 1 3.6523 0.4894 1.7840 36 1 3.8806 -1.2864 3.7877 37 1 1.9271 -3.0155 3.5379 38 1 -0.8142 -2.3477 3.1788 39 1 -2.8056 -3.5284 2.3436 40 1 -2.9191 -5.2764 -0.8825 41 1 -3.6971 -5.0802 0.7063 42 1 -5.5691 -4.9250 -1.2259 43 1 -6.6735 -2.1066 -3.7909 44 1 -5.4106 -3.4127 -3.8046 45 1 -8.5313 -1.8082 -4.1101 46 1 -10.3563 -1.5416 -5.7416 47 1 -11.4091 -3.5278 -6.7468 48 1 -10.6324 -5.7802 -6.1256 49 1 -8.8020 -6.0466 -4.5001 50 1 -7.9618 -4.2478 -1.0710 51 1 -8.4709 -2.6949 -1.8636 52 1 -0.9413 -3.9978 -1.4639 53 1 1.0539 -2.8168 -0.6382 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:02:33 Heat of formation + Delta-G solvation = 77.007261 kcal Electronic energy + Delta-G solvation = -34334.826098 eV Core-core repulsion = 29911.888820 eV Total energy + Delta-G solvation = -4422.937277 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.178 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -42.68075 -41.61071 -40.60965 -39.67822 -38.62461 -37.88359 -34.87234 -34.54140 -32.18494 -32.11010 -31.80865 -31.32177 -31.05078 -27.98011 -26.72970 -26.08507 -25.96555 -23.98827 -23.76038 -23.35260 -22.40516 -21.66668 -21.41069 -20.63379 -20.09835 -19.32162 -18.41468 -17.76001 -17.60401 -17.24357 -17.08314 -16.58889 -16.34157 -16.14010 -15.98765 -15.85614 -15.80503 -15.33204 -15.11198 -14.99704 -14.69313 -14.57043 -14.51499 -14.37314 -14.23806 -14.17678 -14.05412 -13.91575 -13.51188 -13.38045 -13.22952 -13.18384 -12.89322 -12.79826 -12.57664 -12.36286 -12.17580 -12.12985 -11.90031 -11.75141 -11.69517 -11.18621 -11.04818 -10.94061 -10.24230 -10.09395 -10.02342 -9.82834 -9.56148 -9.24047 -9.08273 -4.94946 -0.01164 0.31804 0.41941 0.48855 1.04683 1.35357 1.60853 1.62570 1.80836 1.99678 2.09026 2.11019 2.68928 2.82258 3.23513 3.45957 3.59317 3.66916 3.67877 3.70778 3.74358 3.85722 3.92045 3.99482 4.04476 4.14005 4.14028 4.22608 4.23653 4.29418 4.30215 4.44526 4.51719 4.52166 4.56707 4.61005 4.62196 4.63673 4.67679 4.74006 4.80531 4.86708 4.93641 4.96228 4.98600 5.12007 5.15129 5.17678 5.18632 5.19771 5.26687 5.35539 5.47193 5.54928 5.58580 5.63348 5.74204 5.77180 5.93499 6.11613 6.18481 6.34248 6.49625 6.54167 7.26310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.806 3.194 4 C -0.028 4.028 5 C -0.193 4.193 6 C -0.200 4.200 7 C -0.019 4.019 8 N -0.399 5.399 9 C 0.117 3.883 10 C -0.126 4.126 11 C -0.096 4.096 12 C -0.068 4.068 13 C -0.097 4.097 14 C 0.514 3.486 15 O -0.577 6.577 16 N -0.701 5.701 17 C 0.118 3.882 18 H 0.078 0.922 19 C -0.144 4.144 20 C -0.063 4.063 21 H 0.114 0.886 22 C -0.079 4.079 23 C -0.129 4.129 24 C -0.132 4.132 25 C -0.138 4.138 26 C -0.130 4.130 27 C -0.126 4.126 28 C -0.124 4.124 29 C -0.098 4.098 30 C -0.108 4.108 31 H 0.376 0.624 32 H 0.118 0.882 33 H -0.296 1.296 34 H -0.289 1.289 35 H 0.169 0.831 36 H 0.158 0.842 37 H 0.177 0.823 38 H 0.131 0.869 39 H 0.145 0.855 40 H 0.133 0.867 41 H 0.136 0.864 42 H 0.418 0.582 43 H 0.089 0.911 44 H 0.066 0.934 45 H 0.128 0.872 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.135 0.865 49 H 0.137 0.863 50 H 0.090 0.910 51 H 0.094 0.906 52 H 0.139 0.861 53 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.180 -6.031 0.484 6.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.173 4.173 3 Si 0.708 3.292 4 C -0.137 4.137 5 C -0.217 4.217 6 C -0.224 4.224 7 C -0.146 4.146 8 N -0.072 5.072 9 C 0.028 3.972 10 C -0.145 4.145 11 C -0.115 4.115 12 C -0.068 4.068 13 C -0.136 4.136 14 C 0.302 3.698 15 O -0.456 6.456 16 N -0.354 5.354 17 C 0.012 3.988 18 H 0.096 0.904 19 C -0.183 4.183 20 C -0.081 4.081 21 H 0.132 0.868 22 C -0.079 4.079 23 C -0.147 4.147 24 C -0.150 4.150 25 C -0.156 4.156 26 C -0.148 4.148 27 C -0.144 4.144 28 C -0.162 4.162 29 C -0.116 4.116 30 C -0.128 4.128 31 H 0.224 0.776 32 H 0.136 0.864 33 H -0.224 1.224 34 H -0.216 1.216 35 H 0.186 0.814 36 H 0.176 0.824 37 H 0.194 0.806 38 H 0.148 0.852 39 H 0.163 0.837 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.256 0.744 43 H 0.107 0.893 44 H 0.085 0.915 45 H 0.146 0.854 46 H 0.149 0.851 47 H 0.150 0.850 48 H 0.153 0.847 49 H 0.155 0.845 50 H 0.109 0.891 51 H 0.112 0.888 52 H 0.157 0.843 53 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -1.376 -4.906 -0.143 5.097 hybrid contribution -1.243 -0.259 0.321 1.309 sum -2.619 -5.165 0.177 5.794 Atomic orbital electron populations 1.86646 1.18413 1.74961 1.54628 1.25073 0.83468 1.12366 0.96409 0.93556 0.89798 0.69580 0.76216 1.21244 0.99450 0.92296 1.00710 1.21042 0.99489 1.03550 0.97596 1.21231 1.01474 0.97450 1.02231 1.22372 0.95642 1.03716 0.92902 1.41574 1.21290 1.21438 1.22933 1.17758 0.87013 0.98041 0.94406 1.21141 0.92413 1.00778 1.00187 1.21095 0.97565 0.96966 0.95851 1.19580 0.94958 0.98584 0.93711 1.20763 0.91821 0.96837 1.04171 1.21052 0.82267 0.89485 0.77042 1.90772 1.76407 1.20104 1.58316 1.45574 1.17969 1.11436 1.60388 1.21755 0.89823 0.93477 0.93753 0.90401 1.23581 0.98806 0.99792 0.96103 1.21626 0.93011 1.00109 0.93377 0.86820 1.19890 0.97214 0.93161 0.97685 1.21215 0.97535 0.97511 0.98468 1.21415 0.96757 0.99524 0.97273 1.21444 1.00636 0.92957 1.00584 1.21455 0.97376 0.97953 0.98021 1.21339 0.96746 0.99084 0.97263 1.23336 0.94693 1.01530 0.96634 1.21064 0.92413 0.98170 0.99989 1.20995 0.99375 0.97980 0.94413 0.77569 0.86395 1.22423 1.21580 0.81411 0.82434 0.80577 0.85154 0.83714 0.84916 0.84611 0.74411 0.89279 0.91506 0.85447 0.85127 0.85043 0.84730 0.84521 0.89099 0.88768 0.84315 0.86240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.90 10.99 -148.98 -1.64 -6.53 16 2 C -0.07 -0.30 2.48 71.24 0.18 -0.12 16 3 Si 0.81 1.13 30.79 68.60 2.11 3.24 16 4 C -0.03 -0.17 6.12 41.05 0.25 0.08 16 5 C -0.19 -0.73 9.39 22.15 0.21 -0.52 16 6 C -0.20 -0.78 10.86 22.15 0.24 -0.54 16 7 C -0.02 -0.09 11.21 83.18 0.93 0.84 16 8 N -0.40 -2.82 2.84 -333.40 -0.95 -3.77 16 9 C 0.12 0.83 4.68 38.09 0.18 1.01 16 10 C -0.13 -0.62 9.77 22.38 0.22 -0.40 16 11 C -0.10 -0.24 9.69 22.25 0.22 -0.02 16 12 C -0.07 -0.11 4.38 -19.85 -0.09 -0.20 16 13 C -0.10 0.51 5.83 29.10 0.17 0.68 16 14 C 0.51 0.72 7.82 87.66 0.69 1.40 16 15 O -0.58 -7.27 15.65 -3.04 -0.05 -7.32 16 16 N -0.70 2.82 5.26 -440.02 -2.32 0.50 16 17 C 0.12 -0.13 4.30 45.52 0.20 0.07 16 18 H 0.08 0.36 7.50 -2.39 -0.02 0.34 16 19 C -0.14 0.15 7.27 31.21 0.23 0.38 16 20 C -0.06 0.25 3.87 -10.92 -0.04 0.21 16 21 H 0.11 -0.82 8.09 -2.39 -0.02 -0.84 16 22 C -0.08 0.00 5.29 -19.87 -0.11 -0.10 16 23 C -0.13 -0.16 8.60 22.27 0.19 0.03 16 24 C -0.13 -0.23 10.05 22.27 0.22 0.00 16 25 C -0.14 -0.20 10.05 22.27 0.22 0.02 16 26 C -0.13 -0.09 10.05 22.27 0.22 0.13 16 27 C -0.13 0.01 9.71 22.27 0.22 0.23 16 28 C -0.12 0.56 7.28 31.12 0.23 0.79 16 29 C -0.10 -0.38 9.69 22.25 0.22 -0.16 16 30 C -0.11 -0.72 8.58 22.38 0.19 -0.53 16 31 H 0.38 2.24 8.60 -74.06 -0.64 1.60 16 32 H 0.12 0.38 7.96 -2.39 -0.02 0.36 16 33 H -0.30 -2.36 7.11 99.48 0.71 -1.65 16 34 H -0.29 -1.92 7.11 99.48 0.71 -1.22 16 35 H 0.17 -0.30 6.59 -2.91 -0.02 -0.32 16 36 H 0.16 -0.03 8.06 -2.91 -0.02 -0.05 16 37 H 0.18 0.12 8.06 -2.91 -0.02 0.10 16 38 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 39 H 0.15 -0.28 8.06 -2.91 -0.02 -0.31 16 40 H 0.13 -1.38 8.08 -2.38 -0.02 -1.40 16 41 H 0.14 -1.50 8.08 -2.39 -0.02 -1.52 16 42 H 0.42 -4.56 8.70 -92.71 -0.81 -5.37 16 43 H 0.09 0.00 6.33 -2.38 -0.02 -0.02 16 44 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 45 H 0.13 -0.10 6.68 -2.91 -0.02 -0.12 16 46 H 0.13 -0.15 8.06 -2.91 -0.02 -0.17 16 47 H 0.13 -0.22 8.06 -2.91 -0.02 -0.24 16 48 H 0.13 -0.38 8.06 -2.91 -0.02 -0.40 16 49 H 0.14 -0.57 8.05 -2.91 -0.02 -0.60 16 50 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 51 H 0.09 -0.32 7.72 -2.38 -0.02 -0.34 16 52 H 0.14 0.04 8.06 -2.91 -0.02 0.02 16 53 H 0.12 0.77 8.06 -2.91 -0.02 0.75 16 Total: 0.00 -24.15 437.93 1.87 -22.28 By element: Atomic # 1 Polarization: -11.18 SS G_CDS: -0.47 Total: -11.65 kcal Atomic # 6 Polarization: -1.92 SS G_CDS: 5.18 Total: 3.26 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -3.26 Total: -3.27 kcal Atomic # 8 Polarization: -12.16 SS G_CDS: -1.69 Total: -13.85 kcal Atomic # 14 Polarization: 1.13 SS G_CDS: 2.11 Total: 3.24 kcal Total: -24.15 1.87 -22.28 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.283 kcal (2) G-P(sol) polarization free energy of solvation -24.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.134 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.275 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds