Wall clock time and date at job start Mon Mar 8 2021 02:03:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37866 * 126.45596 * 2 1 4 4 C 1.46683 * 126.23504 * 359.96223 * 3 2 1 5 5 O 1.21694 * 119.99522 * 0.02562 * 4 3 2 6 6 N 1.34772 * 119.99916 * 180.02562 * 4 3 2 7 7 C 1.46501 * 119.99741 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.84965 * 336.19503 * 7 6 4 9 9 C 1.53961 * 113.61337 * 107.46745 * 7 6 4 10 10 C 1.53784 * 87.01647 * 89.19601 * 9 7 6 11 11 H 1.08996 * 113.61485 * 270.76851 * 10 9 7 12 12 C 1.50706 * 113.60769 * 139.95352 * 10 9 7 13 13 C 1.38237 * 119.99761 * 140.86756 * 12 10 9 14 14 C 1.38235 * 119.99712 * 179.97438 * 13 12 10 15 15 C 1.38234 * 120.00220 * 359.94731 * 14 13 12 16 16 C 1.38233 * 120.00037 * 0.28719 * 15 14 13 17 17 C 1.38234 * 120.00191 * 320.83857 * 12 10 9 18 18 C 1.53779 * 87.17555 * 25.36182 * 10 9 7 19 19 N 1.37650 * 107.53288 * 180.22790 * 3 2 1 20 20 C 1.35538 * 108.64497 * 359.56642 * 19 3 2 21 21 C 1.50695 * 125.56873 * 180.20976 * 20 19 3 22 22 O 1.42901 * 109.46709 * 300.29334 * 21 20 19 23 23 Si 1.86295 * 109.47498 * 180.29229 * 21 20 19 24 24 C 1.35451 * 108.86649 * 0.43747 * 20 19 3 25 25 H 1.08996 * 109.47422 * 90.00704 * 1 2 3 26 26 H 1.09009 * 109.47307 * 210.00103 * 1 2 3 27 27 H 1.09001 * 109.47708 * 329.99826 * 1 2 3 28 28 H 0.97005 * 120.00276 * 0.02562 * 6 4 3 29 29 H 1.09003 * 113.66441 * 334.67257 * 9 7 6 30 30 H 1.08995 * 113.61045 * 203.71858 * 9 7 6 31 31 H 1.08005 * 120.00088 * 359.96779 * 13 12 10 32 32 H 1.07999 * 119.99770 * 179.97438 * 14 13 12 33 33 H 1.08002 * 119.99744 * 180.02562 * 15 14 13 34 34 H 1.07998 * 120.00391 * 179.72199 * 16 15 14 35 35 H 1.07999 * 119.99990 * 0.02562 * 17 12 10 36 36 H 1.09006 * 113.61187 * 89.15311 * 18 10 9 37 37 H 1.08992 * 113.61582 * 219.97163 * 18 10 9 38 38 H 0.96996 * 125.68226 * 179.70149 * 19 3 2 39 39 H 1.08998 * 109.47109 * 60.28615 * 21 20 19 40 40 H 0.96704 * 114.00202 * 299.99523 * 22 21 20 41 41 H 1.48504 * 109.99997 * 58.67933 * 23 21 20 42 42 H 1.48494 * 110.00396 * 179.97438 * 23 21 20 43 43 H 1.08007 * 126.06703 * 179.76812 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0008 5 8 0.7025 2.7765 -0.0010 6 7 2.8036 3.4999 -0.0012 7 6 2.3677 4.8985 -0.0014 8 1 1.3643 5.0291 -0.4066 9 6 2.5887 5.6136 1.3440 10 6 3.9839 5.9941 0.8210 11 1 4.7517 5.2541 1.0468 12 6 4.4006 7.3975 1.1787 13 6 5.7085 7.6588 1.5420 14 6 6.0907 8.9463 1.8696 15 6 5.1654 9.9725 1.8330 16 6 3.8564 9.7104 1.4744 17 6 3.4750 8.4236 1.1430 18 6 3.4035 5.8664 -0.5973 19 7 3.6283 0.6625 -0.0052 20 6 3.6217 -0.6929 0.0013 21 6 4.8433 -1.5753 0.0031 22 8 5.6250 -1.3089 -1.1631 23 14 4.3182 -3.3628 0.0038 24 6 2.3379 -1.1247 0.0009 25 1 -0.3634 -0.0001 -1.0276 26 1 -0.3634 -0.8900 0.5139 27 1 -0.3634 0.8899 0.5138 28 1 3.7500 3.2868 -0.0014 29 1 2.6123 4.9386 2.1996 30 1 1.9313 6.4694 1.4967 31 1 6.4317 6.8571 1.5699 32 1 7.1125 9.1503 2.1539 33 1 5.4642 10.9784 2.0886 34 1 3.1323 10.5114 1.4501 35 1 2.4531 8.2195 0.8592 36 1 2.9692 6.7916 -0.9763 37 1 4.0844 5.3967 -1.3071 38 1 4.4190 1.2243 -0.0105 39 1 5.4379 -1.3709 0.8935 40 1 5.1582 -1.4695 -1.9946 41 1 3.4802 -3.6464 -1.1889 42 1 5.5138 -4.2434 0.0050 43 1 2.0135 -2.1549 0.0017 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705150_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:03:15 Heat of formation + Delta-G solvation = 24.971009 kcal Electronic energy + Delta-G solvation = -25038.730590 eV Core-core repulsion = 21437.516651 eV Total energy + Delta-G solvation = -3601.213939 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.62331 -41.45203 -40.00823 -38.67187 -37.90561 -34.82510 -33.41136 -32.09833 -31.82722 -31.26833 -28.16092 -27.26352 -26.83658 -25.87769 -23.69395 -22.99192 -22.33086 -21.60844 -20.57702 -20.07441 -19.57007 -18.32270 -17.95428 -17.10329 -16.78635 -16.46042 -16.25598 -16.12416 -15.94987 -15.47136 -15.16208 -15.10620 -14.74511 -14.60241 -14.31318 -14.24164 -14.11688 -13.86072 -13.59154 -13.57854 -13.48613 -13.13969 -12.92996 -12.79361 -12.28184 -12.23163 -11.89660 -11.82861 -11.79902 -11.26727 -11.09889 -10.83714 -10.20567 -9.84828 -9.83308 -9.59716 -9.17438 -4.99696 0.34683 0.39768 0.46982 1.09167 1.53922 1.58348 1.80791 1.96066 2.13746 2.34116 2.79468 3.16381 3.33589 3.49191 3.57848 3.61151 3.77456 3.84227 3.95727 4.07574 4.13176 4.14610 4.19530 4.21184 4.36584 4.48822 4.54528 4.60687 4.63075 4.72579 4.74096 4.82297 4.87319 4.90621 5.00810 5.03287 5.06692 5.11307 5.21608 5.38109 5.47830 5.54591 5.60976 5.64410 5.68547 5.89900 6.06810 6.17841 6.23535 6.42028 7.12942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.057 4.057 4 C 0.593 3.407 5 O -0.519 6.519 6 N -0.716 5.716 7 C 0.121 3.879 8 H 0.109 0.891 9 C -0.143 4.143 10 C -0.074 4.074 11 H 0.094 0.906 12 C -0.073 4.073 13 C -0.117 4.117 14 C -0.118 4.118 15 C -0.124 4.124 16 C -0.117 4.117 17 C -0.117 4.117 18 C -0.136 4.136 19 N -0.525 5.525 20 C 0.028 3.972 21 C -0.061 4.061 22 O -0.535 6.535 23 Si 0.717 3.283 24 C -0.199 4.199 25 H 0.069 0.931 26 H 0.066 0.934 27 H 0.081 0.919 28 H 0.394 0.606 29 H 0.075 0.925 30 H 0.097 0.903 31 H 0.119 0.881 32 H 0.122 0.878 33 H 0.122 0.878 34 H 0.123 0.877 35 H 0.123 0.877 36 H 0.100 0.900 37 H 0.075 0.925 38 H 0.416 0.584 39 H 0.120 0.880 40 H 0.380 0.620 41 H -0.255 1.255 42 H -0.255 1.255 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.080 -0.465 1.162 2.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.071 4.071 3 C -0.169 4.169 4 C 0.382 3.618 5 O -0.394 6.394 6 N -0.367 5.367 7 C 0.016 3.984 8 H 0.127 0.873 9 C -0.181 4.181 10 C -0.092 4.092 11 H 0.112 0.888 12 C -0.073 4.073 13 C -0.135 4.135 14 C -0.136 4.136 15 C -0.142 4.142 16 C -0.135 4.135 17 C -0.135 4.135 18 C -0.174 4.174 19 N -0.121 5.121 20 C -0.090 4.090 21 C -0.171 4.171 22 O -0.341 6.341 23 Si 0.616 3.384 24 C -0.224 4.224 25 H 0.087 0.913 26 H 0.085 0.915 27 H 0.100 0.900 28 H 0.228 0.772 29 H 0.093 0.907 30 H 0.115 0.885 31 H 0.137 0.863 32 H 0.140 0.860 33 H 0.140 0.860 34 H 0.141 0.859 35 H 0.141 0.859 36 H 0.118 0.882 37 H 0.094 0.906 38 H 0.253 0.747 39 H 0.138 0.862 40 H 0.228 0.772 41 H -0.179 1.179 42 H -0.180 1.180 43 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.785 -0.733 1.167 2.255 hybrid contribution 1.317 0.883 -0.995 1.872 sum 3.102 0.150 0.172 3.110 Atomic orbital electron populations 1.20401 0.88804 1.03341 1.02536 1.19943 0.96068 0.90301 1.00790 1.20211 0.83559 0.93438 1.19725 1.17017 0.85838 0.82907 0.76071 1.90843 1.15849 1.83084 1.49639 1.45564 1.09152 1.05670 1.76291 1.21903 0.99799 0.79542 0.97153 0.87310 1.23598 0.96005 1.00809 0.97724 1.21588 0.97255 0.93734 0.96621 0.88757 1.19674 0.93672 0.94661 0.99258 1.21066 0.95612 0.96960 0.99902 1.21186 0.99695 0.93002 0.99720 1.21208 0.93607 0.99318 1.00046 1.21188 0.96349 0.96800 0.99160 1.21018 0.99426 0.92601 1.00425 1.23434 0.97939 0.99936 0.96048 1.41847 1.07117 1.06580 1.56589 1.21043 0.96822 0.83269 1.07884 1.24914 0.91718 1.09170 0.91260 1.86593 1.42044 1.89522 1.15945 0.94239 0.82130 0.72401 0.89640 1.20610 0.90807 0.99143 1.11840 0.91278 0.91491 0.89975 0.77236 0.90665 0.88463 0.86250 0.86026 0.86041 0.85940 0.85927 0.88154 0.90603 0.74660 0.86197 0.77152 1.17872 1.18020 0.83167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.15 9.83 36.00 0.35 0.20 16 2 C -0.06 -0.12 6.21 -104.16 -0.65 -0.77 16 3 C -0.06 -0.09 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.43 7.79 -12.85 -0.10 1.33 16 5 O -0.52 -2.93 14.40 5.19 0.07 -2.86 16 6 N -0.72 0.43 5.26 -54.23 -0.29 0.15 16 7 C 0.12 -0.07 4.33 -67.02 -0.29 -0.36 16 8 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 9 C -0.14 0.12 7.27 -25.82 -0.19 -0.06 16 10 C -0.07 0.11 3.86 -90.96 -0.35 -0.24 16 11 H 0.09 -0.22 8.09 -51.93 -0.42 -0.64 16 12 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 13 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 14 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 15 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 16 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 17 C -0.12 -0.03 8.54 -39.58 -0.34 -0.36 16 18 C -0.14 0.25 7.29 -25.92 -0.19 0.06 16 19 N -0.52 0.42 5.99 -5.70 -0.03 0.39 16 20 C 0.03 -0.02 6.47 -81.95 -0.53 -0.55 16 21 C -0.06 0.11 3.08 36.00 0.11 0.22 16 22 O -0.53 0.28 12.88 -35.23 -0.45 -0.17 16 23 Si 0.72 -1.55 30.54 -169.99 -5.19 -6.74 16 24 C -0.20 -0.05 9.27 -39.98 -0.37 -0.42 16 25 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 26 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 27 H 0.08 0.27 6.49 -51.93 -0.34 -0.07 16 28 H 0.39 -1.19 7.83 -40.82 -0.32 -1.51 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.10 -0.10 6.40 -51.93 -0.33 -0.44 16 31 H 0.12 -0.14 8.05 -52.48 -0.42 -0.56 16 32 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 33 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 34 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 35 H 0.12 -0.15 6.73 -52.49 -0.35 -0.50 16 36 H 0.10 -0.18 7.64 -51.93 -0.40 -0.58 16 37 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.42 -1.28 8.19 -40.82 -0.33 -1.62 16 39 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 40 H 0.38 -1.09 8.70 45.56 0.40 -0.70 16 41 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 42 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 43 H 0.15 -0.25 6.17 -52.48 -0.32 -0.57 16 LS Contribution 355.85 15.07 5.36 5.36 Total: 0.00 -7.36 355.85 -11.58 -18.94 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -5.80 Total: -11.06 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -5.25 Total: -4.00 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.32 Total: 0.53 kcal Atomic # 8 Polarization: -2.65 SS G_CDS: -0.38 Total: -3.03 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.19 Total: -6.74 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.36 -11.58 -18.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.908 kcal (2) G-P(sol) polarization free energy of solvation -7.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.576 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.937 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds