Wall clock time and date at job start Mon Mar 8 2021 02:04:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86292 * 109.47378 * 2 1 4 4 C 1.50697 * 109.46978 * 120.00258 * 2 1 3 5 5 C 1.38248 * 119.93978 * 244.97013 * 4 2 1 6 6 C 1.38240 * 120.04649 * 179.72407 * 5 4 2 7 7 Br 1.89094 * 120.03703 * 180.28287 * 6 5 4 8 8 C 1.38796 * 119.92726 * 0.53231 * 6 5 4 9 9 O 1.35909 * 120.05910 * 179.76811 * 8 6 5 10 10 C 1.42904 * 116.99864 * 179.72690 * 9 8 6 11 11 C 1.50711 * 109.46830 * 180.02562 * 10 9 8 12 12 O 1.21270 * 120.00254 * 359.97438 * 11 10 9 13 13 N 1.34780 * 119.99583 * 180.02562 * 11 10 9 14 14 C 1.46497 * 119.99653 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84935 * 334.66222 * 14 13 11 16 16 C 1.53786 * 113.61643 * 105.85894 * 14 13 11 17 17 C 1.53962 * 87.01719 * 89.22773 * 16 14 13 18 18 H 1.08997 * 113.53543 * 270.80998 * 17 16 14 19 19 C 1.50701 * 113.74004 * 139.94532 * 17 16 14 20 20 C 1.38228 * 119.99874 * 322.12804 * 19 17 16 21 21 C 1.38240 * 119.99577 * 179.81021 * 20 19 17 22 22 C 1.38228 * 120.00137 * 0.41972 * 21 20 19 23 23 C 1.38237 * 120.00312 * 359.81331 * 22 21 20 24 24 C 1.38233 * 119.99669 * 142.40113 * 19 17 16 25 25 C 1.53781 * 113.61305 * 203.46742 * 14 13 11 26 26 C 1.38721 * 119.87839 * 359.49437 * 8 6 5 27 27 C 1.38142 * 119.95765 * 0.25432 * 26 8 6 28 28 H 0.96698 * 113.99569 * 59.99915 * 1 2 3 29 29 H 1.09003 * 109.46793 * 239.99648 * 2 1 3 30 30 H 1.48501 * 110.00156 * 60.00150 * 3 2 1 31 31 H 1.48504 * 110.00155 * 181.32279 * 3 2 1 32 32 H 1.08002 * 119.97549 * 359.97438 * 5 4 2 33 33 H 1.08992 * 109.47481 * 60.00226 * 10 9 8 34 34 H 1.08997 * 109.47008 * 299.99776 * 10 9 8 35 35 H 0.96995 * 120.00200 * 359.97438 * 13 11 10 36 36 H 1.08993 * 113.61491 * 203.74894 * 16 14 13 37 37 H 1.09000 * 113.61138 * 334.65232 * 16 14 13 38 38 H 1.07993 * 120.00573 * 0.02562 * 20 19 17 39 39 H 1.08000 * 119.99792 * 180.20872 * 21 20 19 40 40 H 1.08003 * 120.00166 * 179.78648 * 22 21 20 41 41 H 1.07997 * 120.00769 * 179.97438 * 23 22 21 42 42 H 1.08005 * 120.00272 * 359.97438 * 24 19 17 43 43 H 1.09001 * 113.61695 * 25.34675 * 25 14 13 44 44 H 1.08996 * 113.61580 * 156.16953 * 25 14 13 45 45 H 1.08004 * 120.01799 * 180.23057 * 26 8 6 46 46 H 1.08006 * 119.96349 * 180.02562 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6392 -0.0112 2.1903 6 6 3.0961 -0.6595 3.3225 7 35 4.0573 0.2989 4.6390 8 6 2.8529 -2.0158 3.4895 9 8 3.3049 -2.6568 4.5995 10 6 3.0127 -4.0515 4.7074 11 6 3.5879 -4.5872 5.9933 12 8 4.1892 -3.8477 6.7431 13 7 3.4349 -5.8884 6.3094 14 6 3.9944 -6.4093 7.5590 15 1 4.8427 -5.8266 7.9182 16 6 2.9359 -6.6867 8.6396 17 6 2.8153 -8.1014 8.0441 18 1 2.0752 -8.1766 7.2475 19 6 2.6716 -9.1858 9.0807 20 6 3.3778 -9.1064 10.2663 21 6 3.2429 -10.0992 11.2188 22 6 2.4086 -11.1755 10.9820 23 6 1.7060 -11.2573 9.7943 24 6 1.8378 -10.2625 8.8435 25 6 4.2548 -7.9246 7.5329 26 6 2.1428 -2.7145 2.5243 27 6 1.6840 -2.0607 1.3971 28 1 -0.3932 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5617 2.4678 1.2085 31 1 3.5347 1.7701 -0.0322 32 1 2.8319 1.0431 2.0573 33 1 3.4536 -4.5815 3.8632 34 1 1.9326 -4.1976 4.7042 35 1 2.9542 -6.4800 5.7095 36 1 3.3337 -6.6726 9.6543 37 1 2.0323 -6.0872 8.5297 38 1 4.0322 -8.2673 10.4500 39 1 3.7921 -10.0356 12.1466 40 1 2.3058 -11.9529 11.7247 41 1 1.0544 -12.0984 9.6090 42 1 1.2891 -10.3265 7.9154 43 1 4.4144 -8.3231 6.5310 44 1 5.0148 -8.2494 8.2436 45 1 1.9491 -3.7691 2.6537 46 1 1.1307 -2.6046 0.6457 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:04:54 Heat of formation + Delta-G solvation = -7.204196 kcal Electronic energy + Delta-G solvation = -29544.157548 eV Core-core repulsion = 25220.247963 eV Total energy + Delta-G solvation = -4323.909585 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.87955 -41.39222 -40.33636 -39.24642 -38.56212 -37.26483 -34.73818 -33.65763 -32.36055 -31.93505 -31.68321 -30.58886 -29.53842 -26.73706 -26.48854 -25.93216 -24.25256 -23.54388 -22.60689 -22.30755 -21.88069 -20.18675 -19.62118 -18.66791 -18.33716 -17.95287 -17.56800 -17.31190 -17.04635 -16.70989 -16.31969 -16.12108 -16.10729 -15.79070 -15.41571 -15.13730 -15.01577 -14.64190 -14.53260 -14.36663 -14.25304 -14.08677 -14.04651 -13.88075 -13.74880 -13.48528 -13.12281 -12.76335 -12.56420 -12.33439 -12.22468 -12.16959 -12.14731 -11.88150 -11.75757 -11.70341 -11.37238 -11.19851 -11.07533 -10.31450 -10.20679 -10.14413 -9.81671 -9.55452 -9.42230 -5.01075 -0.17806 -0.04957 0.42962 0.46840 0.50069 1.27617 1.30791 1.38484 1.59118 1.95045 2.26232 2.40647 2.83213 3.27326 3.39999 3.44229 3.57216 3.65791 3.70397 3.76127 3.79908 3.92371 3.96430 3.98188 4.02284 4.06019 4.15145 4.19916 4.24311 4.30971 4.31104 4.56117 4.59171 4.62474 4.66790 4.67733 4.74817 4.81339 4.92459 4.95097 4.98625 5.11635 5.13411 5.18178 5.18502 5.34021 5.48339 5.58947 5.64567 5.74403 5.96190 6.12767 6.39781 6.92642 7.08800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.059 4.059 3 Si 0.750 3.250 4 C -0.120 4.120 5 C -0.076 4.076 6 C -0.143 4.143 7 Br -0.051 7.051 8 C 0.151 3.849 9 O -0.304 6.304 10 C 0.032 3.968 11 C 0.515 3.485 12 O -0.568 6.568 13 N -0.691 5.691 14 C 0.117 3.883 15 H 0.081 0.919 16 C -0.145 4.145 17 C -0.063 4.063 18 H 0.116 0.884 19 C -0.079 4.079 20 C -0.129 4.129 21 C -0.132 4.132 22 C -0.139 4.139 23 C -0.131 4.131 24 C -0.126 4.126 25 C -0.122 4.122 26 C -0.190 4.190 27 C -0.029 4.029 28 H 0.405 0.595 29 H 0.109 0.891 30 H -0.302 1.302 31 H -0.291 1.291 32 H 0.121 0.879 33 H 0.135 0.865 34 H 0.132 0.868 35 H 0.422 0.578 36 H 0.091 0.909 37 H 0.067 0.933 38 H 0.128 0.872 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.134 0.866 42 H 0.138 0.862 43 H 0.093 0.907 44 H 0.096 0.904 45 H 0.183 0.817 46 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.749 -7.054 -8.612 12.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.170 4.170 3 Si 0.658 3.342 4 C -0.121 4.121 5 C -0.096 4.096 6 C -0.223 4.223 7 Br 0.034 6.966 8 C 0.103 3.897 9 O -0.216 6.216 10 C -0.045 4.045 11 C 0.301 3.699 12 O -0.445 6.445 13 N -0.345 5.345 14 C 0.011 3.989 15 H 0.099 0.901 16 C -0.183 4.183 17 C -0.081 4.081 18 H 0.134 0.866 19 C -0.079 4.079 20 C -0.147 4.147 21 C -0.150 4.150 22 C -0.157 4.157 23 C -0.149 4.149 24 C -0.143 4.143 25 C -0.160 4.160 26 C -0.209 4.209 27 C -0.047 4.047 28 H 0.257 0.743 29 H 0.127 0.873 30 H -0.230 1.230 31 H -0.219 1.219 32 H 0.139 0.861 33 H 0.152 0.848 34 H 0.149 0.851 35 H 0.261 0.739 36 H 0.110 0.890 37 H 0.086 0.914 38 H 0.146 0.854 39 H 0.148 0.852 40 H 0.149 0.851 41 H 0.152 0.848 42 H 0.156 0.844 43 H 0.112 0.888 44 H 0.115 0.885 45 H 0.200 0.800 46 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -3.274 -5.804 -6.460 9.281 hybrid contribution -0.084 -0.589 0.356 0.693 sum -3.358 -6.392 -6.105 9.456 Atomic orbital electron populations 1.86433 1.16723 1.82242 1.51649 1.24463 0.86127 1.09364 0.97041 0.94700 0.77683 0.76952 0.84834 1.19613 1.00722 0.95458 0.96348 1.20769 0.97678 0.98924 0.92205 1.21072 1.09620 0.93526 0.98038 1.96744 1.73310 1.73680 1.52849 1.18741 0.93711 0.90169 0.87092 1.86240 1.73329 1.23699 1.38380 1.22885 1.04122 0.80184 0.97337 1.20488 0.79486 0.82640 0.87298 1.90790 1.42518 1.58328 1.52887 1.45307 1.57473 1.08737 1.22963 1.21828 0.96730 0.95653 0.84643 0.90091 1.23583 0.99544 0.96102 0.99106 1.21631 0.98363 0.91538 0.96609 0.86598 1.19877 0.96768 0.95979 0.95317 1.21221 1.00163 0.99329 0.93986 1.21414 0.99098 0.94637 0.99877 1.21442 0.97361 0.98780 0.98077 1.21457 0.99740 0.99525 0.94132 1.21343 0.98919 0.94010 1.00077 1.23342 0.96527 0.92653 1.03467 1.21725 1.02032 1.02656 0.94451 1.21328 0.93938 0.92654 0.96741 0.74290 0.87308 1.23019 1.21853 0.86114 0.84784 0.85070 0.73949 0.89048 0.91375 0.85370 0.85185 0.85129 0.84767 0.84418 0.88807 0.88538 0.80010 0.81331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.90 12.81 -148.98 -1.91 0.00 16 2 C -0.06 0.18 2.79 71.24 0.20 0.38 16 3 Si 0.75 -0.88 29.84 68.60 2.05 1.17 16 4 C -0.12 -0.31 5.39 -19.85 -0.11 -0.41 16 5 C -0.08 -0.60 8.40 22.27 0.19 -0.41 16 6 C -0.14 -1.39 6.24 22.40 0.14 -1.25 16 7 Br -0.05 -0.65 33.16 -20.37 -0.68 -1.33 16 8 C 0.15 0.79 6.68 22.52 0.15 0.94 16 9 O -0.30 -2.02 9.01 -73.49 -0.66 -2.69 16 10 C 0.03 -0.13 5.22 71.24 0.37 0.25 16 11 C 0.51 1.24 7.91 87.66 0.69 1.93 16 12 O -0.57 -8.45 16.12 16.04 0.26 -8.19 16 13 N -0.69 3.35 5.27 -440.03 -2.32 1.03 16 14 C 0.12 -0.23 4.29 45.52 0.20 -0.03 16 15 H 0.08 0.30 7.50 -2.39 -0.02 0.29 16 16 C -0.14 0.29 7.27 31.18 0.23 0.52 16 17 C -0.06 0.33 3.86 -10.95 -0.04 0.28 16 18 H 0.12 -1.03 8.09 -2.39 -0.02 -1.04 16 19 C -0.08 0.07 5.29 -19.87 -0.11 -0.03 16 20 C -0.13 -0.07 8.61 22.27 0.19 0.12 16 21 C -0.13 -0.17 10.05 22.27 0.22 0.05 16 22 C -0.14 -0.15 10.05 22.27 0.22 0.08 16 23 C -0.13 -0.02 10.05 22.27 0.22 0.20 16 24 C -0.13 0.12 9.71 22.27 0.22 0.33 16 25 C -0.12 0.71 7.29 31.12 0.23 0.93 16 26 C -0.19 0.49 9.04 22.36 0.20 0.69 16 27 C -0.03 0.06 9.68 22.26 0.22 0.27 16 28 H 0.41 -5.51 8.74 -74.06 -0.65 -6.16 16 29 H 0.11 -0.95 7.96 -2.39 -0.02 -0.97 16 30 H -0.30 -2.34 7.05 99.48 0.70 -1.64 16 31 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 32 H 0.12 1.09 4.86 -2.91 -0.01 1.08 16 33 H 0.13 -1.53 7.66 -2.39 -0.02 -1.55 16 34 H 0.13 -1.42 7.66 -2.39 -0.02 -1.44 16 35 H 0.42 -5.45 8.71 -92.71 -0.81 -6.26 16 36 H 0.09 -0.09 6.35 -2.39 -0.02 -0.11 16 37 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.13 -0.20 6.69 -2.91 -0.02 -0.22 16 39 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 40 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 41 H 0.13 -0.44 8.06 -2.91 -0.02 -0.46 16 42 H 0.14 -0.72 8.05 -2.91 -0.02 -0.74 16 43 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 44 H 0.10 -0.44 7.72 -2.39 -0.02 -0.46 16 45 H 0.18 -2.11 6.30 -2.91 -0.02 -2.12 16 46 H 0.17 -1.34 8.06 -2.91 -0.02 -1.36 16 Total: 0.00 -30.50 402.97 -0.01 -30.51 By element: Atomic # 1 Polarization: -24.97 SS G_CDS: -0.38 Total: -25.35 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: 3.63 Total: 4.85 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -2.32 Total: 1.03 kcal Atomic # 8 Polarization: -8.57 SS G_CDS: -2.31 Total: -10.88 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: 2.05 Total: 1.17 kcal Atomic # 35 Polarization: -0.65 SS G_CDS: -0.68 Total: -1.33 kcal Total: -30.50 -0.01 -30.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.304 kcal (2) G-P(sol) polarization free energy of solvation -30.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.508 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds