Wall clock time and date at job start Mon Mar 8 2021 02:05:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42890 * 1 3 3 Si 1.86305 * 109.47250 * 2 1 4 4 C 1.50702 * 109.47409 * 120.00175 * 2 1 3 5 5 C 1.34242 * 126.49878 * 255.31527 * 4 2 1 6 6 N 1.36837 * 109.93297 * 180.16551 * 5 4 2 7 7 C 1.46502 * 125.05902 * 179.81494 * 6 5 4 8 8 C 1.50697 * 109.47010 * 264.70026 * 7 6 5 9 9 O 1.21276 * 120.00284 * 359.97438 * 8 7 6 10 10 N 1.34785 * 119.99668 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99410 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.85531 * 23.79835 * 11 10 8 13 13 C 1.53788 * 113.61257 * 154.99634 * 11 10 8 14 14 C 1.53782 * 87.07916 * 89.10992 * 13 11 10 15 15 H 1.08993 * 113.61864 * 270.79795 * 14 13 11 16 16 C 1.50706 * 113.61271 * 139.97933 * 14 13 11 17 17 C 1.38238 * 119.99758 * 120.00112 * 16 14 13 18 18 C 1.38234 * 119.99693 * 179.97438 * 17 16 14 19 19 C 1.38234 * 120.00240 * 0.02562 * 18 17 16 20 20 C 1.38233 * 120.00037 * 0.26327 * 19 18 17 21 21 C 1.38234 * 120.00194 * 300.02438 * 16 14 13 22 22 C 1.53778 * 113.61060 * 252.48997 * 11 10 8 23 23 C 1.37688 * 109.87796 * 359.55592 * 6 5 4 24 24 C 1.39081 * 133.51352 * 180.24634 * 23 6 5 25 25 C 1.37796 * 119.77396 * 180.02562 * 24 23 6 26 26 C 1.38779 * 120.66912 * 359.97438 * 25 24 23 27 27 C 1.36659 * 120.53128 * 0.02562 * 26 25 24 28 28 C 1.39592 * 119.76405 * 359.97438 * 27 26 25 29 29 H 0.96698 * 113.99941 * 299.99588 * 1 2 3 30 30 H 1.09008 * 109.47205 * 240.00090 * 2 1 3 31 31 H 1.48504 * 109.99623 * 300.00282 * 3 2 1 32 32 H 1.48496 * 109.99716 * 61.31848 * 3 2 1 33 33 H 1.07995 * 125.03301 * 0.02562 * 5 4 2 34 34 H 1.08996 * 109.47048 * 144.69311 * 7 6 5 35 35 H 1.09002 * 109.46958 * 24.70063 * 7 6 5 36 36 H 0.96993 * 119.99713 * 359.97438 * 10 8 7 37 37 H 1.08996 * 113.61105 * 334.56740 * 13 11 10 38 38 H 1.08995 * 113.69112 * 203.67083 * 13 11 10 39 39 H 1.08005 * 120.00103 * 0.02562 * 17 16 14 40 40 H 1.07999 * 119.99751 * 179.97438 * 18 17 16 41 41 H 1.08002 * 119.99744 * 179.97438 * 19 18 17 42 42 H 1.07998 * 120.00391 * 179.72199 * 20 19 18 43 43 H 1.07999 * 119.99990 * 359.97438 * 21 16 14 44 44 H 1.09001 * 113.61469 * 156.33921 * 22 11 10 45 45 H 1.09004 * 113.61845 * 25.43614 * 22 11 10 46 46 H 1.07995 * 120.11465 * 0.03581 * 24 23 6 47 47 H 1.08008 * 119.66064 * 179.97438 * 25 24 23 48 48 H 1.08003 * 119.73660 * 180.02562 * 26 25 24 49 49 H 1.08005 * 120.12298 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4554 -0.1372 2.3254 6 7 2.8028 -1.0991 3.2345 7 6 3.4076 -0.8405 4.5436 8 6 4.9059 -0.9627 4.4377 9 8 5.4181 -1.2392 3.3737 10 7 5.6766 -0.7659 5.5257 11 6 7.1332 -0.8842 5.4226 12 1 7.5004 -0.7218 4.4093 13 6 7.8937 -0.0794 6.4898 14 6 7.8020 -1.3276 7.3835 15 1 6.9020 -1.3600 7.9973 16 6 9.0577 -1.5995 8.1713 17 6 9.0151 -1.6241 9.5528 18 6 10.1667 -1.8741 10.2754 19 6 11.3610 -2.0989 9.6165 20 6 11.4048 -2.0683 8.2352 21 6 10.2521 -1.8238 7.5125 22 6 7.6969 -2.1505 6.0886 23 6 2.4940 -2.3457 2.7383 24 6 2.6294 -3.6362 3.2390 25 6 2.2160 -4.7108 2.4819 26 6 1.6645 -4.5193 1.2229 27 6 1.5222 -3.2601 0.7115 28 6 1.9342 -2.1570 1.4612 29 1 -0.3933 0.4416 0.7651 30 1 1.7923 -0.5139 -0.8901 31 1 1.5613 2.4679 -1.2085 32 1 1.5878 2.4585 1.2242 33 1 2.5858 0.9254 2.4667 34 1 3.0339 -1.5659 5.2662 35 1 3.1475 0.1660 4.8716 36 1 5.2669 -0.5452 6.3767 37 1 7.3349 0.7741 6.8734 38 1 8.9130 0.1770 6.2012 39 1 8.0819 -1.4489 10.0675 40 1 10.1336 -1.8929 11.3547 41 1 12.2608 -2.2937 10.1812 42 1 12.3387 -2.2395 7.7206 43 1 10.2853 -1.8046 6.4332 44 1 8.6624 -2.4610 5.6890 45 1 6.9794 -2.9688 6.1484 46 1 3.0568 -3.7955 4.2179 47 1 2.3224 -5.7122 2.8724 48 1 1.3452 -5.3724 0.6425 49 1 1.0925 -3.1187 -0.2693 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705150_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:05:29 Heat of formation + Delta-G solvation = 63.111568 kcal Electronic energy + Delta-G solvation = -31160.040904 eV Core-core repulsion = 27020.264823 eV Total energy + Delta-G solvation = -4139.776081 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.54662 -41.49121 -40.23455 -38.75229 -38.14475 -37.65622 -34.69466 -34.00468 -31.94566 -31.71833 -31.24017 -30.24027 -28.95163 -26.70052 -26.34192 -25.50923 -23.83055 -23.53078 -22.86530 -22.35885 -21.79894 -20.68357 -20.09893 -18.70841 -18.55289 -17.86344 -17.73409 -17.34710 -16.80738 -16.41504 -16.30129 -16.18879 -16.13830 -15.94407 -15.52564 -15.39671 -15.00983 -14.90393 -14.71704 -14.59285 -14.33491 -14.24666 -14.06902 -14.03673 -13.64878 -13.47908 -13.27019 -12.99610 -12.75407 -12.70587 -12.57124 -12.39841 -12.15215 -12.00202 -11.73680 -11.73431 -11.67294 -11.16933 -11.13372 -10.55379 -10.44783 -10.13149 -9.80877 -9.54149 -9.16215 -8.63484 -4.85936 0.14020 0.43972 0.50842 0.63781 1.35387 1.40637 1.46685 1.58429 1.68217 1.97548 2.19366 2.84315 2.94885 3.48338 3.53754 3.58669 3.65637 3.70731 3.71711 3.78576 3.84500 3.95827 4.03459 4.07314 4.14600 4.15955 4.21766 4.25956 4.29834 4.32068 4.50014 4.58537 4.58904 4.64075 4.69301 4.71774 4.77609 4.78882 4.85106 4.89847 4.97936 5.01476 5.13732 5.14145 5.16120 5.19309 5.50732 5.53180 5.59987 5.65455 5.66318 5.73472 5.75152 5.75837 6.13656 6.18986 6.23417 6.48830 6.60720 7.15902 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.051 4.051 3 Si 0.765 3.235 4 C -0.215 4.215 5 C 0.075 3.925 6 N -0.466 5.466 7 C 0.088 3.912 8 C 0.495 3.505 9 O -0.566 6.566 10 N -0.694 5.694 11 C 0.120 3.880 12 H 0.082 0.918 13 C -0.123 4.123 14 C -0.064 4.064 15 H 0.114 0.886 16 C -0.080 4.080 17 C -0.127 4.127 18 C -0.131 4.131 19 C -0.139 4.139 20 C -0.132 4.132 21 C -0.129 4.129 22 C -0.144 4.144 23 C 0.091 3.909 24 C -0.134 4.134 25 C -0.108 4.108 26 C -0.154 4.154 27 C -0.088 4.088 28 C -0.116 4.116 29 H 0.384 0.616 30 H 0.103 0.897 31 H -0.302 1.302 32 H -0.259 1.259 33 H 0.198 0.802 34 H 0.143 0.857 35 H 0.163 0.837 36 H 0.420 0.580 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.137 0.863 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.129 0.871 44 H 0.089 0.911 45 H 0.067 0.933 46 H 0.132 0.868 47 H 0.145 0.855 48 H 0.136 0.864 49 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.909 2.940 8.352 9.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.159 4.159 3 Si 0.668 3.332 4 C -0.223 4.223 5 C -0.051 4.051 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.280 3.720 9 O -0.444 6.444 10 N -0.347 5.347 11 C 0.014 3.986 12 H 0.100 0.900 13 C -0.161 4.161 14 C -0.082 4.082 15 H 0.132 0.868 16 C -0.080 4.080 17 C -0.145 4.145 18 C -0.149 4.149 19 C -0.157 4.157 20 C -0.150 4.150 21 C -0.147 4.147 22 C -0.183 4.183 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.127 4.127 26 C -0.173 4.173 27 C -0.107 4.107 28 C -0.120 4.120 29 H 0.233 0.767 30 H 0.121 0.879 31 H -0.230 1.230 32 H -0.184 1.184 33 H 0.214 0.786 34 H 0.160 0.840 35 H 0.180 0.820 36 H 0.258 0.742 37 H 0.110 0.890 38 H 0.113 0.887 39 H 0.155 0.845 40 H 0.151 0.849 41 H 0.148 0.852 42 H 0.149 0.851 43 H 0.147 0.853 44 H 0.108 0.892 45 H 0.086 0.914 46 H 0.150 0.850 47 H 0.162 0.838 48 H 0.154 0.846 49 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 2.287 3.349 7.363 8.406 hybrid contribution -0.926 -0.504 0.603 1.215 sum 1.361 2.845 7.966 8.568 Atomic orbital electron populations 1.86560 1.19085 1.80609 1.49851 1.24585 0.82807 1.11644 0.96889 0.94038 0.90434 0.71094 0.77645 1.20707 1.11406 0.91857 0.98307 1.22021 0.99216 0.95173 0.88674 1.43421 1.51869 1.03809 1.15716 1.21972 0.88748 1.08977 0.83984 1.21393 0.90426 0.76237 0.83903 1.90807 1.75589 1.48074 1.29901 1.45477 1.05924 1.70984 1.12350 1.21770 0.80092 0.97005 0.99753 0.89966 1.23343 1.01404 0.96923 0.94460 1.21600 0.95695 0.96652 0.94275 0.86773 1.19907 0.95074 0.99174 0.93817 1.21341 0.99113 1.00260 0.93737 1.21450 0.93029 0.99557 1.00864 1.21439 0.98781 1.00513 0.94970 1.21419 0.99002 0.99955 0.94619 1.21225 0.92549 1.00401 1.00486 1.23538 1.01840 0.97092 0.95804 1.18392 1.01536 0.87003 0.94450 1.20241 1.04647 0.89116 1.01418 1.21129 0.98177 0.99007 0.94356 1.20913 1.02352 0.97039 0.96969 1.20453 0.99070 0.91704 0.99433 1.19341 1.04033 0.93818 0.94791 0.76744 0.87895 1.23007 1.18384 0.78563 0.83974 0.81970 0.74196 0.88973 0.88737 0.84516 0.84862 0.85172 0.85148 0.85287 0.89217 0.91448 0.84974 0.83751 0.84616 0.86344 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.70 12.88 -148.98 -1.92 -5.62 16 2 C -0.05 -0.21 3.06 71.24 0.22 0.00 16 3 Si 0.77 -0.25 30.83 68.60 2.11 1.86 16 4 C -0.22 -1.22 5.57 -18.63 -0.10 -1.33 16 5 C 0.07 0.08 9.89 83.00 0.82 0.90 16 6 N -0.47 -0.64 2.27 -519.99 -1.18 -1.82 16 7 C 0.09 -0.67 6.48 85.63 0.56 -0.12 16 8 C 0.49 -0.97 7.90 87.65 0.69 -0.28 16 9 O -0.57 -5.45 16.02 -3.02 -0.05 -5.49 16 10 N -0.69 5.35 5.26 -440.04 -2.32 3.04 16 11 C 0.12 -0.51 4.32 45.52 0.20 -0.31 16 12 H 0.08 0.10 7.46 -2.39 -0.02 0.09 16 13 C -0.12 0.89 7.29 31.12 0.23 1.12 16 14 C -0.06 0.41 3.86 -11.01 -0.04 0.36 16 15 H 0.11 -1.11 8.09 -2.39 -0.02 -1.13 16 16 C -0.08 0.14 5.29 -19.86 -0.11 0.03 16 17 C -0.13 0.19 9.71 22.27 0.22 0.40 16 18 C -0.13 0.04 10.05 22.27 0.22 0.26 16 19 C -0.14 -0.07 10.05 22.27 0.22 0.15 16 20 C -0.13 -0.07 10.05 22.27 0.22 0.15 16 21 C -0.13 0.04 8.61 22.27 0.19 0.23 16 22 C -0.14 0.54 7.25 31.12 0.23 0.76 16 23 C 0.09 0.65 6.80 39.03 0.27 0.92 16 24 C -0.13 -0.70 10.00 22.37 0.22 -0.48 16 25 C -0.11 -0.54 10.01 22.29 0.22 -0.32 16 26 C -0.15 -1.04 9.97 22.03 0.22 -0.82 16 27 C -0.09 -0.85 10.05 22.23 0.22 -0.63 16 28 C -0.12 -1.14 6.35 -20.20 -0.13 -1.27 16 29 H 0.38 -0.02 8.70 -74.06 -0.64 -0.66 16 30 H 0.10 0.55 7.96 -2.38 -0.02 0.53 16 31 H -0.30 -2.24 7.11 99.48 0.71 -1.53 16 32 H -0.26 0.15 6.99 99.48 0.70 0.84 16 33 H 0.20 -1.14 6.27 -2.91 -0.02 -1.16 16 34 H 0.14 -1.77 8.14 -2.39 -0.02 -1.78 16 35 H 0.16 -2.55 8.12 -2.39 -0.02 -2.57 16 36 H 0.42 -6.25 8.70 -92.71 -0.81 -7.06 16 37 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 38 H 0.09 -0.55 7.72 -2.39 -0.02 -0.56 16 39 H 0.14 -0.77 8.06 -2.91 -0.02 -0.79 16 40 H 0.13 -0.48 8.06 -2.91 -0.02 -0.50 16 41 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 42 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 43 H 0.13 -0.34 6.66 -2.91 -0.02 -0.36 16 44 H 0.09 -0.22 6.31 -2.39 -0.02 -0.23 16 45 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 46 H 0.13 0.06 8.06 -2.91 -0.02 0.03 16 47 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 48 H 0.14 0.37 8.06 -2.91 -0.02 0.35 16 49 H 0.12 1.03 8.06 -2.91 -0.02 1.01 16 Total: 0.00 -26.54 408.81 1.00 -25.54 By element: Atomic # 1 Polarization: -16.82 SS G_CDS: -0.44 Total: -17.26 kcal Atomic # 6 Polarization: -5.04 SS G_CDS: 4.79 Total: -0.25 kcal Atomic # 7 Polarization: 4.71 SS G_CDS: -3.50 Total: 1.21 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -1.97 Total: -11.11 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: 2.11 Total: 1.86 kcal Total: -26.54 1.00 -25.54 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705150_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.653 kcal (2) G-P(sol) polarization free energy of solvation -26.543 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.541 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds