Wall clock time and date at job start Mon Mar 8 2021 02:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42890 * 1 3 3 Si 1.86304 * 109.47289 * 2 1 4 4 C 1.50700 * 109.46906 * 240.00468 * 2 1 3 5 5 C 1.36456 * 120.29481 * 240.01906 * 4 2 1 6 6 C 1.40090 * 119.25369 * 179.72699 * 5 4 2 7 7 C 1.40857 * 132.86585 * 179.65829 * 6 5 4 8 8 C 1.46568 * 126.57644 * 0.64451 * 7 6 5 9 9 O 1.21727 * 120.00293 * 359.71334 * 8 7 6 10 10 N 1.34772 * 119.99956 * 179.71166 * 8 7 6 11 11 C 1.46503 * 120.00092 * 179.97438 * 10 8 7 12 12 H 1.09004 * 112.90447 * 23.75255 * 11 10 8 13 13 C 1.53779 * 113.61468 * 154.99753 * 11 10 8 14 14 C 1.53787 * 87.08027 * 89.11977 * 13 11 10 15 15 H 1.09000 * 113.60875 * 270.80198 * 14 13 11 16 16 C 1.50696 * 113.61637 * 139.98005 * 14 13 11 17 17 C 1.38220 * 119.99283 * 299.98223 * 16 14 13 18 18 C 1.38264 * 120.02583 * 180.02562 * 17 16 14 19 19 C 1.38189 * 120.01199 * 359.97438 * 18 17 16 20 20 C 1.38377 * 119.99104 * 359.97438 * 19 18 17 21 21 Cl 1.73595 * 120.01640 * 180.27805 * 20 19 18 22 22 C 1.38232 * 119.99218 * 119.99879 * 16 14 13 23 23 C 1.53777 * 113.61440 * 252.49932 * 11 10 8 24 24 C 1.40554 * 106.84288 * 180.38020 * 7 6 5 25 25 N 1.30735 * 108.74312 * 0.22979 * 24 7 6 26 26 N 1.36576 * 120.23213 * 0.48538 * 6 5 4 27 27 C 1.36241 * 120.07819 * 359.51548 * 26 6 5 28 28 C 1.35191 * 120.70901 * 0.24980 * 27 26 6 29 29 H 0.96700 * 114.00388 * 59.98905 * 1 2 3 30 30 H 1.08999 * 109.47809 * 120.00607 * 2 1 3 31 31 H 1.48495 * 110.00119 * 298.68568 * 3 2 1 32 32 H 1.48507 * 109.99929 * 60.00445 * 3 2 1 33 33 H 1.07999 * 120.37125 * 359.97438 * 5 4 2 34 34 H 0.97003 * 120.00024 * 0.02562 * 10 8 7 35 35 H 1.09000 * 113.61977 * 334.57518 * 13 11 10 36 36 H 1.08995 * 113.61845 * 203.66686 * 13 11 10 37 37 H 1.08000 * 119.98968 * 359.97438 * 17 16 14 38 38 H 1.07997 * 119.99869 * 179.97438 * 18 17 16 39 39 H 1.08001 * 120.00973 * 180.02562 * 19 18 17 40 40 H 1.07996 * 120.01099 * 359.95663 * 22 16 14 41 41 H 1.08999 * 113.61016 * 156.33815 * 23 11 10 42 42 H 1.08995 * 113.61760 * 25.43245 * 23 11 10 43 43 H 1.07993 * 125.62576 * 180.24542 * 24 7 6 44 44 H 1.08001 * 119.64891 * 180.23566 * 27 26 6 45 45 H 1.07992 * 119.84049 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2305 5 6 2.7157 -1.8205 -1.1124 6 6 3.1658 -2.4671 -2.2708 7 6 3.9732 -3.6017 -2.4827 8 6 4.5734 -4.4516 -1.4504 9 8 4.3947 -4.1978 -0.2733 10 7 5.3230 -5.5142 -1.8043 11 6 5.9234 -6.3635 -0.7725 12 1 5.3939 -6.3135 0.1791 13 6 6.2073 -7.7992 -1.2447 14 6 7.5846 -7.2919 -1.7038 15 1 7.5923 -6.9152 -2.7266 16 6 8.7068 -8.2590 -1.4277 17 6 8.9799 -8.6483 -0.1299 18 6 10.0098 -9.5352 0.1242 19 6 10.7664 -10.0332 -0.9194 20 6 10.4929 -9.6446 -2.2191 21 17 11.4383 -10.2754 -3.5313 22 6 9.4632 -8.7562 -2.4725 23 6 7.4456 -6.1897 -0.6405 24 6 4.0879 -3.7659 -3.8738 25 7 3.4153 -2.8141 -4.4661 26 7 2.8297 -1.9834 -3.5030 27 6 2.0460 -0.8742 -3.6107 28 6 1.5963 -0.2368 -2.5065 29 1 -0.3934 0.4418 -0.7649 30 1 1.7924 -0.5139 0.8899 31 1 1.5878 2.4586 -1.2241 32 1 1.5615 2.4679 1.2086 33 1 2.9833 -2.1988 -0.1369 34 1 5.4657 -5.7163 -2.7423 35 1 5.5663 -8.1242 -2.0643 36 1 6.2576 -8.5242 -0.4324 37 1 8.3891 -8.2591 0.6861 38 1 10.2230 -9.8388 1.1384 39 1 11.5706 -10.7262 -0.7209 40 1 9.2495 -8.4523 -3.4865 41 1 7.8343 -6.4747 0.3371 42 1 7.8042 -5.2153 -0.9721 43 1 4.6402 -4.5493 -4.3714 44 1 1.7813 -0.4999 -4.5885 45 1 0.9763 0.6415 -2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:05:52 Heat of formation + Delta-G solvation = 89.694489 kcal Electronic energy + Delta-G solvation = -30952.504788 eV Core-core repulsion = 26544.193345 eV Total energy + Delta-G solvation = -4408.311443 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.103 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.31561 -41.47797 -40.20751 -39.39647 -38.72737 -37.34341 -37.31297 -34.54490 -34.14457 -32.13170 -32.06003 -31.48182 -30.19596 -27.40551 -26.63932 -26.22821 -24.98193 -23.98419 -23.59329 -23.08760 -22.47116 -21.37066 -20.09943 -19.18246 -18.59833 -18.20500 -17.87993 -17.45272 -16.99480 -16.97166 -16.55291 -16.37024 -16.33971 -15.89967 -15.76716 -15.46541 -15.32838 -15.23460 -14.71662 -14.65164 -14.60870 -14.25066 -14.22051 -13.82305 -13.53772 -13.47903 -13.40952 -13.23559 -12.87042 -12.54013 -12.47353 -12.39895 -12.23645 -12.11623 -11.89783 -11.67580 -11.61735 -11.57013 -11.17934 -10.95609 -10.88504 -10.32498 -10.04168 -9.82948 -9.57651 -8.79478 -4.88982 -0.56202 -0.13721 0.18732 0.30909 1.02320 1.03305 1.16829 1.21594 1.60070 1.89330 2.08394 2.21823 2.49450 2.63033 3.08737 3.23693 3.37093 3.50769 3.54719 3.66905 3.71206 3.77097 3.86992 3.91308 3.97704 4.02493 4.16098 4.16970 4.19308 4.32380 4.35667 4.40175 4.46850 4.58179 4.69822 4.73186 4.77377 4.82862 4.94017 4.98171 5.03482 5.08531 5.11064 5.15909 5.21624 5.28372 5.29470 5.41495 5.55411 5.65143 5.71685 5.87283 6.28847 6.46242 6.62751 7.32402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.084 4.084 3 Si 0.767 3.233 4 C -0.051 4.051 5 C -0.115 4.115 6 C 0.152 3.848 7 C -0.339 4.339 8 C 0.602 3.398 9 O -0.588 6.588 10 N -0.698 5.698 11 C 0.119 3.881 12 H 0.088 0.912 13 C -0.125 4.125 14 C -0.066 4.066 15 H 0.112 0.888 16 C -0.059 4.059 17 C -0.116 4.116 18 C -0.107 4.107 19 C -0.128 4.128 20 C -0.048 4.048 21 Cl -0.082 7.082 22 C -0.117 4.117 23 C -0.141 4.141 24 C 0.131 3.869 25 N -0.340 5.340 26 N -0.274 5.274 27 C 0.117 3.883 28 C -0.157 4.157 29 H 0.390 0.610 30 H 0.124 0.876 31 H -0.254 1.254 32 H -0.294 1.294 33 H 0.152 0.848 34 H 0.413 0.587 35 H 0.087 0.913 36 H 0.103 0.897 37 H 0.146 0.854 38 H 0.151 0.849 39 H 0.138 0.862 40 H 0.140 0.860 41 H 0.100 0.900 42 H 0.067 0.933 43 H 0.234 0.766 44 H 0.205 0.795 45 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.061 2.386 -1.748 2.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.191 4.191 3 Si 0.668 3.332 4 C -0.057 4.057 5 C -0.134 4.134 6 C 0.031 3.969 7 C -0.354 4.354 8 C 0.392 3.608 9 O -0.470 6.470 10 N -0.349 5.349 11 C 0.014 3.986 12 H 0.106 0.894 13 C -0.163 4.163 14 C -0.085 4.085 15 H 0.130 0.870 16 C -0.060 4.060 17 C -0.134 4.134 18 C -0.126 4.126 19 C -0.147 4.147 20 C -0.075 4.075 21 Cl -0.053 7.053 22 C -0.136 4.136 23 C -0.179 4.179 24 C -0.050 4.050 25 N -0.161 5.161 26 N -0.038 5.038 27 C -0.009 4.009 28 C -0.178 4.178 29 H 0.240 0.760 30 H 0.142 0.858 31 H -0.179 1.179 32 H -0.221 1.221 33 H 0.170 0.830 34 H 0.250 0.750 35 H 0.105 0.895 36 H 0.121 0.879 37 H 0.164 0.836 38 H 0.168 0.832 39 H 0.155 0.845 40 H 0.158 0.842 41 H 0.118 0.882 42 H 0.086 0.914 43 H 0.250 0.750 44 H 0.221 0.779 45 H 0.207 0.793 Dipole moment (debyes) X Y Z Total from point charges -0.518 3.412 -1.768 3.878 hybrid contribution -0.429 -0.946 -0.274 1.074 sum -0.946 2.466 -2.041 3.339 Atomic orbital electron populations 1.86679 1.17396 1.80600 1.50358 1.25285 0.83990 1.12423 0.97442 0.93448 0.90681 0.70621 0.78476 1.20565 0.94640 0.93981 0.96527 1.20663 0.99858 0.95378 0.97544 1.19559 0.95929 0.94594 0.86811 1.19689 1.17139 1.04389 0.94197 1.16976 0.77120 0.79864 0.86843 1.90759 1.63277 1.72862 1.20082 1.45233 1.51447 1.27771 1.10427 1.21802 0.93741 0.90853 0.92223 0.89431 1.23390 0.95195 0.95125 1.02543 1.21619 0.91973 0.94243 1.00620 0.87010 1.19805 0.96331 0.97177 0.92669 1.21411 0.97759 0.97254 0.97001 1.21412 0.94862 0.96545 0.99731 1.21295 1.01289 1.01226 0.90865 1.21137 0.96593 1.00339 0.89395 1.98382 1.72102 1.86183 1.48663 1.21133 0.94632 0.97073 1.00736 1.23564 0.95510 0.98825 1.00008 1.24600 0.93392 0.95731 0.91263 1.77573 1.19695 1.07261 1.11531 1.46302 1.32548 1.19514 1.05428 1.22176 0.90985 0.84280 1.03431 1.21091 1.03930 1.03182 0.89578 0.75959 0.85837 1.17867 1.22067 0.82996 0.75028 0.89461 0.87883 0.83615 0.83171 0.84458 0.84232 0.88157 0.91379 0.75011 0.77862 0.79326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.33 12.87 -148.98 -1.92 -1.59 16 2 C -0.08 0.24 2.84 71.24 0.20 0.45 16 3 Si 0.77 -4.01 31.97 68.60 2.19 -1.81 16 4 C -0.05 0.09 4.53 -19.81 -0.09 0.00 16 5 C -0.11 -0.42 9.35 22.30 0.21 -0.21 16 6 C 0.15 0.87 6.76 39.50 0.27 1.14 16 7 C -0.34 -1.61 6.17 -19.90 -0.12 -1.74 16 8 C 0.60 3.59 7.78 86.42 0.67 4.27 16 9 O -0.59 -7.84 15.31 -4.43 -0.07 -7.90 16 10 N -0.70 1.11 5.25 -444.08 -2.33 -1.22 16 11 C 0.12 -0.24 4.32 45.52 0.20 -0.04 16 12 H 0.09 0.22 7.46 -2.38 -0.02 0.20 16 13 C -0.12 0.74 7.29 31.12 0.23 0.97 16 14 C -0.07 0.37 3.86 -11.01 -0.04 0.33 16 15 H 0.11 -0.88 8.09 -2.39 -0.02 -0.90 16 16 C -0.06 0.14 5.29 -19.87 -0.11 0.03 16 17 C -0.12 0.33 8.61 22.27 0.19 0.52 16 18 C -0.11 0.21 10.05 22.26 0.22 0.44 16 19 C -0.13 -0.09 9.83 22.29 0.22 0.13 16 20 C -0.05 -0.11 6.32 22.33 0.14 0.03 16 21 Cl -0.08 -0.30 28.96 -2.72 -0.08 -0.38 16 22 C -0.12 0.00 9.49 22.29 0.21 0.21 16 23 C -0.14 0.49 7.25 31.12 0.23 0.72 16 24 C 0.13 0.03 11.44 85.42 0.98 1.01 16 25 N -0.34 -1.45 12.57 -56.63 -0.71 -2.16 16 26 N -0.27 -0.92 3.86 -187.27 -0.72 -1.64 16 27 C 0.12 -0.40 11.17 83.31 0.93 0.53 16 28 C -0.16 0.93 8.38 22.03 0.18 1.11 16 29 H 0.39 -3.38 8.08 -74.06 -0.60 -3.98 16 30 H 0.12 -0.32 7.71 -2.39 -0.02 -0.34 16 31 H -0.25 1.21 7.05 99.48 0.70 1.91 16 32 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 33 H 0.15 0.85 7.01 -2.91 -0.02 0.83 16 34 H 0.41 -3.22 7.62 -92.71 -0.71 -3.93 16 35 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.10 -0.65 7.72 -2.39 -0.02 -0.67 16 37 H 0.15 -0.93 6.65 -2.91 -0.02 -0.95 16 38 H 0.15 -0.92 8.06 -2.91 -0.02 -0.95 16 39 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 40 H 0.14 -0.33 8.05 -2.91 -0.02 -0.35 16 41 H 0.10 -0.44 6.31 -2.39 -0.02 -0.46 16 42 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 43 H 0.23 -2.19 7.46 -2.91 -0.02 -2.21 16 44 H 0.20 -1.99 8.06 -2.91 -0.02 -2.02 16 45 H 0.19 -2.44 7.26 -2.91 -0.02 -2.46 16 Total: 0.00 -25.01 395.58 0.88 -24.13 By element: Atomic # 1 Polarization: -17.11 SS G_CDS: -0.20 Total: -17.31 kcal Atomic # 6 Polarization: 5.17 SS G_CDS: 4.72 Total: 9.89 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -3.77 Total: -5.03 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -1.99 Total: -9.49 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: 2.19 Total: -1.81 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.38 kcal Total: -25.01 0.88 -24.13 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.827 kcal (2) G-P(sol) polarization free energy of solvation -25.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.133 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds