Wall clock time and date at job start Mon Mar 8 2021 02:06:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46802 * 2 1 4 4 C 1.50703 * 109.47432 * 119.99832 * 2 1 3 5 5 C 1.37851 * 119.88599 * 64.99873 * 4 2 1 6 6 C 1.39662 * 119.87362 * 179.70171 * 5 4 2 7 7 C 1.47699 * 120.16473 * 180.26104 * 6 5 4 8 8 O 1.21567 * 119.99613 * 179.97438 * 7 6 5 9 9 N 1.34773 * 119.99940 * 359.97438 * 7 6 5 10 10 C 1.46500 * 120.00005 * 179.97438 * 9 7 6 11 11 H 1.09003 * 112.84967 * 336.20901 * 10 9 7 12 12 C 1.53779 * 113.61204 * 107.50417 * 10 9 7 13 13 C 1.53783 * 87.08249 * 89.11983 * 12 10 9 14 14 H 1.09003 * 113.61033 * 270.88861 * 13 12 10 15 15 C 1.50694 * 113.69421 * 139.99347 * 13 12 10 16 16 C 1.38221 * 119.99057 * 322.18982 * 15 13 12 17 17 C 1.38265 * 120.02528 * 179.72497 * 16 15 13 18 18 C 1.38192 * 120.01140 * 0.55445 * 17 16 15 19 19 C 1.38369 * 119.98962 * 359.71957 * 18 17 16 20 20 Cl 1.73598 * 120.01720 * 180.02562 * 19 18 17 21 21 C 1.38240 * 119.99627 * 142.46722 * 15 13 12 22 22 C 1.53775 * 113.61725 * 205.00113 * 10 9 7 23 23 C 1.39821 * 119.67108 * 0.27882 * 6 5 4 24 24 F 1.35099 * 120.11629 * 180.02562 * 23 6 5 25 25 C 1.38326 * 119.77833 * 0.02562 * 23 6 5 26 26 C 1.38211 * 120.11318 * 359.97438 * 25 23 6 27 27 H 0.96696 * 114.00016 * 60.00352 * 1 2 3 28 28 H 1.08999 * 109.47516 * 240.00271 * 2 1 3 29 29 H 1.48496 * 110.00146 * 298.67992 * 3 2 1 30 30 H 1.48494 * 110.00209 * 60.00035 * 3 2 1 31 31 H 1.08002 * 120.06662 * 359.97438 * 5 4 2 32 32 H 0.97003 * 120.00118 * 0.02562 * 9 7 6 33 33 H 1.09003 * 113.61661 * 203.66444 * 12 10 9 34 34 H 1.08998 * 113.61726 * 334.57174 * 12 10 9 35 35 H 1.08004 * 119.98845 * 359.97438 * 16 15 13 36 36 H 1.08004 * 119.99207 * 180.27274 * 17 16 15 37 37 H 1.07999 * 120.00843 * 179.70583 * 18 17 16 38 38 H 1.07997 * 120.00140 * 0.02562 * 21 15 13 39 39 H 1.09004 * 113.61233 * 25.43965 * 22 10 9 40 40 H 1.09009 * 113.61391 * 156.33515 * 22 10 9 41 41 H 1.07991 * 119.94204 * 180.02562 * 25 23 6 42 42 H 1.08004 * 119.82405 * 179.97438 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6842 -2.0564 1.3956 6 6 2.1553 -2.7159 2.5330 7 6 1.8991 -4.1592 2.7137 8 8 2.3109 -4.7302 3.7047 9 7 1.2086 -4.8431 1.7799 10 6 0.9549 -6.2748 1.9588 11 1 1.6793 -6.7539 2.6175 12 6 -0.5069 -6.6027 2.3055 13 6 -0.7636 -6.6922 0.7919 14 1 -1.0445 -5.7410 0.3398 15 6 -1.6816 -7.8207 0.3990 16 6 -1.6044 -9.0346 1.0555 17 6 -2.4503 -10.0688 0.6995 18 6 -3.3656 -9.8929 -0.3208 19 6 -3.4396 -8.6798 -0.9822 20 17 -4.5896 -8.4579 -2.2635 21 6 -2.5969 -7.6436 -0.6217 22 6 0.7288 -7.0301 0.6385 23 6 2.8704 -2.0028 3.5001 24 9 3.3307 -2.6318 4.6036 25 6 3.1050 -0.6511 3.3232 26 6 2.6347 -0.0076 2.1941 27 1 -0.3933 0.4416 -0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 1.5878 2.4586 -1.2242 30 1 1.5614 2.4679 1.2084 31 1 1.1310 -2.6011 0.6447 32 1 0.8803 -4.3875 0.9889 33 1 -0.6298 -7.5525 2.8261 34 1 -1.0354 -5.7818 2.7902 35 1 -0.8858 -9.1741 1.8497 36 1 -2.3925 -11.0157 1.2158 37 1 -4.0231 -10.7023 -0.6020 38 1 -2.6538 -6.6967 -1.1378 39 1 1.1980 -6.5542 -0.2226 40 1 0.9439 -8.0968 0.7033 41 1 3.6574 -0.0979 4.0682 42 1 2.8202 1.0480 2.0610 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:06:05 Heat of formation + Delta-G solvation = -28.718808 kcal Electronic energy + Delta-G solvation = -28683.969285 eV Core-core repulsion = 24343.910802 eV Total energy + Delta-G solvation = -4340.058483 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.087 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -50.01964 -41.79861 -40.86210 -39.92376 -38.87787 -37.59346 -37.37691 -34.85428 -32.83068 -32.43326 -31.91403 -31.31532 -26.73393 -26.67655 -26.54641 -25.29575 -23.78379 -23.29173 -22.46320 -21.64059 -20.23870 -19.14911 -18.62648 -18.44920 -18.03840 -17.75135 -17.01778 -16.88261 -16.54695 -16.43519 -16.30241 -15.96694 -15.80811 -15.62812 -15.37153 -15.05895 -14.68618 -14.60763 -14.48085 -14.28850 -14.06847 -13.81799 -13.67332 -13.48798 -13.31116 -12.93950 -12.77482 -12.57500 -12.45953 -12.43282 -12.27474 -11.81787 -11.74420 -11.67299 -11.26623 -11.19262 -10.51097 -10.42312 -10.13118 -9.86737 -9.82470 -9.61671 -4.88951 -0.51234 -0.03424 0.14986 0.27111 1.13745 1.30317 1.57214 1.63583 1.89366 1.99182 2.43810 2.58860 3.03735 3.26662 3.38540 3.40749 3.56670 3.60311 3.67826 3.73997 3.86224 3.93903 4.01570 4.09181 4.12609 4.13091 4.27706 4.34766 4.42341 4.56159 4.61409 4.67528 4.74816 4.76409 4.77756 4.85804 4.92662 4.92993 4.96775 4.99201 5.09943 5.16083 5.24943 5.36839 5.44094 5.58098 5.60851 5.83330 6.33387 6.60851 7.02724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.078 4.078 3 Si 0.756 3.244 4 C -0.095 4.095 5 C -0.024 4.024 6 C -0.189 4.189 7 C 0.558 3.442 8 O -0.569 6.569 9 N -0.692 5.692 10 C 0.113 3.887 11 H 0.089 0.911 12 C -0.143 4.143 13 C -0.066 4.066 14 H 0.111 0.889 15 C -0.060 4.060 16 C -0.117 4.117 17 C -0.107 4.107 18 C -0.127 4.127 19 C -0.048 4.048 20 Cl -0.081 7.081 21 C -0.116 4.116 22 C -0.121 4.121 23 C 0.134 3.866 24 F -0.135 7.135 25 C -0.152 4.152 26 C -0.055 4.055 27 H 0.398 0.602 28 H 0.110 0.890 29 H -0.288 1.288 30 H -0.295 1.295 31 H 0.161 0.839 32 H 0.415 0.585 33 H 0.102 0.898 34 H 0.065 0.935 35 H 0.146 0.854 36 H 0.151 0.849 37 H 0.138 0.862 38 H 0.140 0.860 39 H 0.091 0.909 40 H 0.106 0.894 41 H 0.168 0.832 42 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.041 2.766 -5.853 6.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.187 4.187 3 Si 0.662 3.338 4 C -0.096 4.096 5 C -0.043 4.043 6 C -0.193 4.193 7 C 0.347 3.653 8 O -0.449 6.449 9 N -0.344 5.344 10 C 0.008 3.992 11 H 0.107 0.893 12 C -0.181 4.181 13 C -0.084 4.084 14 H 0.129 0.871 15 C -0.061 4.061 16 C -0.134 4.134 17 C -0.125 4.125 18 C -0.146 4.146 19 C -0.074 4.074 20 Cl -0.052 7.052 21 C -0.135 4.135 22 C -0.159 4.159 23 C 0.114 3.886 24 F -0.114 7.114 25 C -0.171 4.171 26 C -0.073 4.073 27 H 0.249 0.751 28 H 0.128 0.872 29 H -0.215 1.215 30 H -0.223 1.223 31 H 0.178 0.822 32 H 0.253 0.747 33 H 0.121 0.879 34 H 0.084 0.916 35 H 0.163 0.837 36 H 0.169 0.831 37 H 0.156 0.844 38 H 0.158 0.842 39 H 0.109 0.891 40 H 0.125 0.875 41 H 0.185 0.815 42 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.122 2.851 -4.704 5.896 hybrid contribution -1.568 -0.107 -0.519 1.655 sum 0.554 2.744 -5.223 5.926 Atomic orbital electron populations 1.86538 1.18045 1.80668 1.51378 1.24883 0.84404 1.11391 0.98049 0.94222 0.90329 0.72560 0.76733 1.19484 0.99658 0.93671 0.96751 1.21205 0.94395 0.94189 0.94486 1.20042 1.06872 0.93870 0.98501 1.18262 0.77725 0.86577 0.82774 1.90839 1.52662 1.70820 1.30559 1.45422 1.55494 1.09650 1.23812 1.21916 0.97454 0.80398 0.99470 0.89272 1.23581 0.95563 1.03081 0.95874 1.21607 0.93649 0.96829 0.96346 0.87111 1.19768 0.95892 0.95513 0.94894 1.21407 0.99497 0.92444 1.00095 1.21416 0.94503 1.00349 0.96241 1.21303 1.00308 0.96205 0.96747 1.21133 0.95454 0.96781 0.94082 1.98383 1.59385 1.97351 1.50088 1.21123 0.95362 0.98761 0.98245 1.23386 0.93996 1.01889 0.96589 1.18177 0.95569 0.91635 0.83262 1.91560 1.86161 1.82844 1.50795 1.21357 1.03397 0.91501 1.00825 1.21373 0.93886 1.00861 0.91145 0.75072 0.87230 1.21541 1.22251 0.82162 0.74678 0.87937 0.91648 0.83671 0.83133 0.84370 0.84215 0.89050 0.87523 0.81474 0.82034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.52 12.81 -148.98 -1.91 0.61 16 2 C -0.08 0.58 2.79 71.24 0.20 0.78 16 3 Si 0.76 -5.43 29.85 68.60 2.05 -3.39 16 4 C -0.10 0.36 5.38 -19.90 -0.11 0.25 16 5 C -0.02 0.07 9.17 22.52 0.21 0.27 16 6 C -0.19 -0.72 5.88 -20.05 -0.12 -0.84 16 7 C 0.56 3.94 7.77 86.74 0.67 4.61 16 8 O -0.57 -9.35 14.94 -3.93 -0.06 -9.41 16 9 N -0.69 0.67 5.21 -443.06 -2.31 -1.64 16 10 C 0.11 -0.16 4.32 45.52 0.20 0.04 16 11 H 0.09 0.28 7.46 -2.39 -0.02 0.26 16 12 C -0.14 0.36 7.26 31.12 0.23 0.59 16 13 C -0.07 0.35 3.85 -11.02 -0.04 0.31 16 14 H 0.11 -0.82 8.09 -2.39 -0.02 -0.84 16 15 C -0.06 0.13 5.29 -19.87 -0.11 0.03 16 16 C -0.12 0.32 8.60 22.27 0.19 0.51 16 17 C -0.11 0.21 10.05 22.27 0.22 0.44 16 18 C -0.13 -0.07 9.83 22.29 0.22 0.15 16 19 C -0.05 -0.11 6.32 22.32 0.14 0.04 16 20 Cl -0.08 -0.27 28.96 -2.72 -0.08 -0.35 16 21 C -0.12 0.01 9.49 22.29 0.21 0.22 16 22 C -0.12 0.75 7.29 31.12 0.23 0.98 16 23 C 0.13 0.80 7.29 22.67 0.17 0.97 16 24 F -0.14 -1.70 15.55 44.97 0.70 -1.00 16 25 C -0.15 0.11 10.02 22.28 0.22 0.33 16 26 C -0.06 0.22 8.66 22.32 0.19 0.41 16 27 H 0.40 -4.71 8.74 -74.06 -0.65 -5.36 16 28 H 0.11 -1.37 7.96 -2.39 -0.02 -1.39 16 29 H -0.29 0.59 7.11 99.48 0.71 1.30 16 30 H -0.29 0.00 7.04 99.48 0.70 0.70 16 31 H 0.16 -1.35 6.41 -2.91 -0.02 -1.37 16 32 H 0.41 -3.01 6.73 -92.71 -0.62 -3.64 16 33 H 0.10 -0.37 6.33 -2.39 -0.02 -0.38 16 34 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.15 -0.90 6.68 -2.91 -0.02 -0.92 16 36 H 0.15 -0.92 8.06 -2.91 -0.02 -0.94 16 37 H 0.14 -0.19 8.06 -2.91 -0.02 -0.22 16 38 H 0.14 -0.35 8.05 -2.91 -0.02 -0.37 16 39 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 40 H 0.11 -0.73 7.71 -2.38 -0.02 -0.74 16 41 H 0.17 -0.83 8.06 -2.92 -0.02 -0.86 16 42 H 0.16 -1.37 4.84 -2.91 -0.01 -1.39 16 Total: 0.00 -23.22 370.18 1.18 -22.04 By element: Atomic # 1 Polarization: -16.79 SS G_CDS: -0.14 Total: -16.93 kcal Atomic # 6 Polarization: 7.14 SS G_CDS: 2.92 Total: 10.07 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -2.31 Total: -1.64 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -1.97 Total: -8.80 kcal Atomic # 9 Polarization: -1.70 SS G_CDS: 0.70 Total: -1.00 kcal Atomic # 14 Polarization: -5.43 SS G_CDS: 2.05 Total: -3.39 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -0.08 Total: -0.35 kcal Total: -23.22 1.18 -22.04 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.675 kcal (2) G-P(sol) polarization free energy of solvation -23.221 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.044 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds