Wall clock time and date at job start Mon Mar 8 2021 02:08:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47115 * 2 1 4 4 C 1.50700 * 109.47532 * 120.00474 * 2 1 3 5 5 C 1.38357 * 120.34826 * 64.99504 * 4 2 1 6 6 C 1.40021 * 118.28790 * 180.02562 * 5 4 2 7 7 C 1.47836 * 120.56146 * 179.97438 * 6 5 4 8 8 O 1.21553 * 119.99786 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99999 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99694 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.85134 * 336.19446 * 10 9 7 12 12 C 1.53775 * 113.61322 * 107.50282 * 10 9 7 13 13 C 1.53791 * 87.08170 * 89.11513 * 12 10 9 14 14 H 1.09002 * 113.68801 * 270.87155 * 13 12 10 15 15 C 1.50699 * 113.61207 * 139.97749 * 13 12 10 16 16 C 1.38226 * 119.98636 * 142.50400 * 15 13 12 17 17 C 1.38262 * 120.02265 * 179.97438 * 16 15 13 18 18 C 1.38198 * 120.01341 * 359.97100 * 17 16 15 19 19 C 1.38365 * 119.98813 * 0.02753 * 18 17 16 20 20 Cl 1.73603 * 120.01643 * 179.97438 * 19 18 17 21 21 C 1.38231 * 119.99737 * 322.22948 * 15 13 12 22 22 C 1.53782 * 87.07903 * 25.43351 * 13 12 10 23 23 C 1.39523 * 118.88112 * 0.02562 * 6 5 4 24 24 N 1.31694 * 120.56847 * 0.02562 * 23 6 5 25 25 C 1.31933 * 121.87963 * 359.97438 * 24 23 6 26 26 H 0.96701 * 114.00352 * 59.99532 * 1 2 3 27 27 H 1.09010 * 109.46743 * 240.00117 * 2 1 3 28 28 H 1.48500 * 110.00037 * 60.00411 * 3 2 1 29 29 H 1.48503 * 109.99979 * 181.32405 * 3 2 1 30 30 H 1.07994 * 120.85854 * 0.04271 * 5 4 2 31 31 H 0.96995 * 120.00170 * 0.02562 * 9 7 6 32 32 H 1.09006 * 113.61424 * 203.66208 * 12 10 9 33 33 H 1.09001 * 113.61843 * 334.56816 * 12 10 9 34 34 H 1.07995 * 119.99222 * 359.97438 * 16 15 13 35 35 H 1.08007 * 119.99416 * 179.97438 * 17 16 15 36 36 H 1.08002 * 120.00338 * 180.02562 * 18 17 16 37 37 H 1.08001 * 120.00386 * 0.02562 * 21 15 13 38 38 H 1.09000 * 113.61143 * 220.02310 * 22 13 12 39 39 H 1.08993 * 113.62047 * 89.11891 * 22 13 12 40 40 H 1.07998 * 119.72093 * 180.02562 * 23 6 5 41 41 H 1.08000 * 119.45784 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6886 -2.0613 1.4057 6 6 2.1748 -2.6778 2.5651 7 6 1.9438 -4.1184 2.8037 8 8 1.3276 -4.7781 1.9896 9 7 2.4163 -4.7002 3.9238 10 6 2.1878 -6.1279 4.1599 11 1 1.3204 -6.5122 3.6232 12 6 3.4502 -6.9898 3.9918 13 6 3.7284 -6.7333 5.4825 14 1 4.3197 -5.8369 5.6697 15 6 4.2498 -7.9421 6.2159 16 6 5.2156 -7.7937 7.1935 17 6 5.6941 -8.9022 7.8673 18 6 5.2064 -10.1592 7.5641 19 6 4.2396 -10.3084 6.5856 20 17 3.6269 -11.8872 6.2036 21 6 3.7579 -9.1984 5.9149 22 6 2.2146 -6.5183 5.6472 23 6 2.8799 -1.9094 3.4919 24 7 3.0845 -0.6258 3.2803 25 6 2.6384 -0.0183 2.1974 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5139 -0.8901 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 1.1387 -2.6257 0.6673 31 1 2.9076 -4.1737 4.5736 32 1 3.2385 -8.0338 3.7605 33 1 4.1937 -6.5502 3.3270 34 1 5.5967 -6.8115 7.4312 35 1 6.4490 -8.7857 8.6308 36 1 5.5800 -11.0249 8.0907 37 1 3.0004 -9.3138 5.1538 38 1 1.9607 -5.6981 6.3186 39 1 1.6652 -7.4333 5.8684 40 1 3.2613 -2.3712 4.3906 41 1 2.8283 1.0364 2.0638 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:08:09 Heat of formation + Delta-G solvation = 24.070456 kcal Electronic energy + Delta-G solvation = -26032.688914 eV Core-core repulsion = 22098.947610 eV Total energy + Delta-G solvation = -3933.741304 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.14542 -41.36259 -40.24494 -38.91196 -37.86289 -37.40522 -34.97980 -33.98138 -33.21127 -31.71233 -31.67206 -27.35293 -26.89652 -26.74731 -25.47778 -23.90931 -23.66394 -22.66600 -21.85646 -20.29753 -19.17516 -18.53370 -18.45746 -18.06473 -17.87741 -16.98673 -16.57033 -16.42232 -16.34128 -16.11802 -15.49861 -15.38478 -15.24994 -14.94213 -14.73727 -14.66393 -14.50054 -14.34184 -14.27950 -13.86344 -13.61391 -13.51488 -12.99913 -12.64979 -12.59569 -12.48068 -12.19334 -12.15652 -11.85223 -11.69276 -11.54212 -11.24939 -11.19363 -10.84405 -10.61101 -10.27764 -10.18880 -9.85496 -9.62611 -4.97250 -0.74225 -0.15224 0.16243 0.25967 1.13719 1.22162 1.51557 1.64190 1.81375 1.91542 2.46917 2.59147 2.92363 3.17990 3.38308 3.41214 3.55828 3.56428 3.61053 3.66745 3.72025 3.83783 3.92284 3.99394 4.05052 4.13775 4.22290 4.28627 4.41775 4.43521 4.54920 4.65986 4.70265 4.73180 4.75117 4.83525 4.92435 4.95771 4.98816 5.07810 5.16388 5.24732 5.35455 5.45060 5.58566 5.84178 6.27502 6.46716 6.84489 6.95175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.081 4.081 3 Si 0.780 3.220 4 C -0.141 4.141 5 C 0.002 3.998 6 C -0.192 4.192 7 C 0.570 3.430 8 O -0.568 6.568 9 N -0.689 5.689 10 C 0.114 3.886 11 H 0.089 0.911 12 C -0.144 4.144 13 C -0.064 4.064 14 H 0.122 0.878 15 C -0.062 4.062 16 C -0.113 4.113 17 C -0.108 4.108 18 C -0.128 4.128 19 C -0.049 4.049 20 Cl -0.083 7.083 21 C -0.118 4.118 22 C -0.125 4.125 23 C 0.145 3.855 24 N -0.496 5.496 25 C 0.110 3.890 26 H 0.407 0.593 27 H 0.100 0.900 28 H -0.288 1.288 29 H -0.281 1.281 30 H 0.147 0.853 31 H 0.416 0.584 32 H 0.094 0.906 33 H 0.072 0.928 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.138 0.862 37 H 0.136 0.864 38 H 0.093 0.907 39 H 0.099 0.901 40 H 0.199 0.801 41 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.242 4.471 0.029 5.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.191 4.191 3 Si 0.684 3.316 4 C -0.143 4.143 5 C -0.025 4.025 6 C -0.197 4.197 7 C 0.357 3.643 8 O -0.448 6.448 9 N -0.341 5.341 10 C 0.009 3.991 11 H 0.107 0.893 12 C -0.182 4.182 13 C -0.082 4.082 14 H 0.140 0.860 15 C -0.062 4.062 16 C -0.131 4.131 17 C -0.126 4.126 18 C -0.146 4.146 19 C -0.075 4.075 20 Cl -0.054 7.054 21 C -0.136 4.136 22 C -0.163 4.163 23 C -0.014 4.014 24 N -0.203 5.203 25 C -0.046 4.046 26 H 0.259 0.741 27 H 0.118 0.882 28 H -0.215 1.215 29 H -0.207 1.207 30 H 0.165 0.835 31 H 0.255 0.745 32 H 0.112 0.888 33 H 0.090 0.910 34 H 0.169 0.831 35 H 0.170 0.830 36 H 0.155 0.845 37 H 0.154 0.846 38 H 0.112 0.888 39 H 0.117 0.883 40 H 0.215 0.785 41 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 2.776 4.608 1.016 5.475 hybrid contribution -0.327 -1.304 -0.264 1.370 sum 2.448 3.304 0.753 4.181 Atomic orbital electron populations 1.86438 1.16866 1.82607 1.51627 1.24844 0.86280 1.11775 0.96158 0.93842 0.77706 0.74774 0.85274 1.20696 1.00739 0.94648 0.98253 1.21721 0.91722 0.93587 0.95451 1.21058 1.05155 0.94879 0.98618 1.18059 0.78240 0.86263 0.81721 1.90803 1.42282 1.65336 1.46363 1.45413 1.56622 1.10256 1.21830 1.21908 0.98961 0.79944 0.98281 0.89326 1.23565 0.97542 1.00880 0.96230 1.21660 0.96504 0.96051 0.94025 0.85958 1.19789 0.96210 0.93691 0.96549 1.21510 0.96170 1.00237 0.95203 1.21447 0.99849 0.91353 0.99966 1.21308 0.96588 0.99543 0.97178 1.21120 0.99744 0.86387 1.00266 1.98385 1.87038 1.26173 1.93801 1.21038 1.01110 0.91063 1.00437 1.23391 0.95162 1.03384 0.94355 1.23517 0.91252 0.88680 0.97932 1.67740 1.20263 1.11538 1.20797 1.22912 0.92836 0.99956 0.88878 0.74071 0.88245 1.21526 1.20728 0.83477 0.74486 0.88762 0.90970 0.83087 0.83044 0.84452 0.84601 0.88796 0.88265 0.78456 0.82545 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.69 12.82 -148.98 -1.91 -1.22 16 2 C -0.08 0.17 2.81 71.24 0.20 0.37 16 3 Si 0.78 -3.54 29.88 68.60 2.05 -1.49 16 4 C -0.14 -0.53 5.39 -19.81 -0.11 -0.63 16 5 C 0.00 0.01 9.38 22.73 0.21 0.22 16 6 C -0.19 -0.62 5.89 -19.99 -0.12 -0.74 16 7 C 0.57 2.54 7.78 86.78 0.68 3.22 16 8 O -0.57 -7.33 16.02 -3.88 -0.06 -7.39 16 9 N -0.69 2.08 5.22 -442.91 -2.31 -0.23 16 10 C 0.11 -0.28 4.32 45.52 0.20 -0.08 16 11 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 12 C -0.14 0.49 7.25 31.12 0.23 0.71 16 13 C -0.06 0.42 3.86 -11.01 -0.04 0.38 16 14 H 0.12 -1.28 8.09 -2.39 -0.02 -1.30 16 15 C -0.06 0.18 5.29 -19.87 -0.11 0.08 16 16 C -0.11 0.45 9.71 22.27 0.22 0.67 16 17 C -0.11 0.30 10.05 22.27 0.22 0.52 16 18 C -0.13 -0.05 9.83 22.29 0.22 0.17 16 19 C -0.05 -0.12 6.32 22.32 0.14 0.02 16 20 Cl -0.08 -0.34 28.96 -2.72 -0.08 -0.42 16 21 C -0.12 -0.01 8.38 22.29 0.19 0.17 16 22 C -0.13 0.80 7.29 31.12 0.23 1.03 16 23 C 0.14 0.01 10.71 85.02 0.91 0.92 16 24 N -0.50 -2.38 10.35 -194.75 -2.01 -4.39 16 25 C 0.11 0.52 9.84 84.70 0.83 1.36 16 26 H 0.41 -4.86 8.74 -74.06 -0.65 -5.51 16 27 H 0.10 -0.60 7.96 -2.38 -0.02 -0.61 16 28 H -0.29 -0.67 7.05 99.48 0.70 0.03 16 29 H -0.28 -0.11 7.11 99.48 0.71 0.59 16 30 H 0.15 0.89 7.74 -2.91 -0.02 0.87 16 31 H 0.42 -4.03 6.77 -92.71 -0.63 -4.66 16 32 H 0.09 -0.24 6.32 -2.38 -0.02 -0.26 16 33 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 34 H 0.15 -1.34 8.05 -2.91 -0.02 -1.36 16 35 H 0.15 -1.07 8.06 -2.91 -0.02 -1.10 16 36 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 37 H 0.14 -0.16 6.67 -2.91 -0.02 -0.18 16 38 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 39 H 0.10 -0.54 7.71 -2.39 -0.02 -0.56 16 40 H 0.20 -1.73 6.42 -2.91 -0.02 -1.75 16 41 H 0.16 0.47 4.87 -2.91 -0.01 0.45 16 Total: 0.00 -22.76 360.71 -0.37 -23.13 By element: Atomic # 1 Polarization: -16.22 SS G_CDS: -0.14 Total: -16.36 kcal Atomic # 6 Polarization: 4.28 SS G_CDS: 4.10 Total: 8.38 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -4.33 Total: -4.62 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -1.97 Total: -8.61 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.05 Total: -1.49 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.08 Total: -0.42 kcal Total: -22.76 -0.37 -23.13 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.198 kcal (2) G-P(sol) polarization free energy of solvation -22.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.127 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds