Wall clock time and date at job start Mon Mar 8 2021 02:09:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86297 * 109.47008 * 2 1 4 4 C 1.50702 * 109.47324 * 120.00076 * 2 1 3 5 5 C 1.34486 * 125.49428 * 210.34181 * 4 2 1 6 6 C 1.46754 * 106.36529 * 180.13548 * 5 4 2 7 7 C 1.47266 * 126.97044 * 179.81721 * 6 5 4 8 8 O 1.21626 * 119.99625 * 179.68516 * 7 6 5 9 9 N 1.34778 * 119.99705 * 359.68764 * 7 6 5 10 10 C 1.46504 * 119.99268 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.91014 * 336.24629 * 10 9 7 12 12 C 1.53778 * 113.61494 * 107.50308 * 10 9 7 13 13 C 1.53781 * 87.08252 * 89.10980 * 12 10 9 14 14 H 1.08998 * 113.69370 * 270.87618 * 13 12 10 15 15 C 1.50702 * 113.61585 * 139.97966 * 13 12 10 16 16 C 1.38219 * 119.99257 * 142.49939 * 15 13 12 17 17 C 1.38272 * 120.02538 * 179.70240 * 16 15 13 18 18 C 1.38194 * 120.01292 * 0.25862 * 17 16 15 19 19 C 1.38378 * 119.98253 * 0.02562 * 18 17 16 20 20 Cl 1.73599 * 120.00793 * 179.97438 * 19 18 17 21 21 C 1.38240 * 119.99530 * 322.76139 * 15 13 12 22 22 C 1.53780 * 87.07996 * 25.43371 * 13 12 10 23 23 C 1.36340 * 106.06049 * 359.55768 * 6 5 4 24 24 C 1.50994 * 126.79397 * 180.30798 * 23 6 5 25 25 C 1.53394 * 108.25535 * 164.30351 * 24 23 6 26 26 C 1.53153 * 109.04387 * 48.45683 * 25 24 23 27 27 C 1.53137 * 109.52449 * 290.42354 * 26 25 24 28 28 N 1.35212 * 108.65755 * 0.28318 * 23 6 5 29 29 H 0.96696 * 113.99658 * 60.00031 * 1 2 3 30 30 H 1.09002 * 109.46778 * 239.99968 * 2 1 3 31 31 H 1.48506 * 110.00100 * 298.67906 * 3 2 1 32 32 H 1.48493 * 109.99993 * 59.99936 * 3 2 1 33 33 H 1.08002 * 126.81910 * 359.95753 * 5 4 2 34 34 H 0.96996 * 120.00377 * 359.97438 * 9 7 6 35 35 H 1.09007 * 113.61689 * 334.56712 * 12 10 9 36 36 H 1.08992 * 113.61886 * 203.65932 * 12 10 9 37 37 H 1.08002 * 119.99072 * 359.97438 * 16 15 13 38 38 H 1.08001 * 119.99055 * 180.27778 * 17 16 15 39 39 H 1.07993 * 120.00582 * 179.97438 * 18 17 16 40 40 H 1.08002 * 120.00536 * 359.97438 * 21 15 13 41 41 H 1.09003 * 113.61779 * 89.11616 * 22 13 12 42 42 H 1.09001 * 113.61296 * 219.93297 * 22 13 12 43 43 H 1.09005 * 109.70392 * 283.99548 * 24 23 6 44 44 H 1.09003 * 109.70753 * 44.60910 * 24 23 6 45 45 H 1.09000 * 109.53888 * 168.32843 * 25 24 23 46 46 H 1.08995 * 109.54368 * 288.49851 * 25 24 23 47 47 H 1.08996 * 109.46727 * 50.44553 * 26 25 24 48 48 H 1.09003 * 109.45792 * 170.41296 * 26 25 24 49 49 H 1.09000 * 109.56030 * 170.83598 * 27 26 25 50 50 H 1.08992 * 109.56389 * 291.18365 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0826 -0.4420 1.8718 6 6 3.1551 -1.3774 3.0002 7 6 4.2333 -1.4794 3.9982 8 8 4.1604 -2.3031 4.8901 9 7 5.3007 -0.6600 3.9231 10 6 6.3736 -0.7619 4.9156 11 1 6.0418 -1.2038 5.8550 12 6 7.6661 -1.3860 4.3636 13 6 8.0927 0.0381 3.9703 14 1 7.7652 0.3338 2.9736 15 6 9.5528 0.3200 4.2142 16 6 10.2648 1.0986 3.3213 17 6 11.6030 1.3628 3.5476 18 6 12.2308 0.8440 4.6641 19 6 11.5199 0.0595 5.5552 20 17 12.3081 -0.5931 6.9576 21 6 10.1813 -0.2047 5.3281 22 6 7.1721 0.5400 5.0952 23 6 2.0191 -2.1289 2.9409 24 6 1.6147 -3.2331 3.8879 25 6 0.1219 -3.5198 3.6824 26 6 -0.1564 -3.6704 2.1839 27 6 -0.0051 -2.3106 1.4961 28 7 1.2885 -1.7251 1.8772 29 1 -0.3932 0.4417 -0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5879 2.4586 -1.2243 32 1 1.5615 2.4678 1.2084 33 1 3.8108 0.3104 1.6070 34 1 5.3590 -0.0033 3.2116 35 1 7.5033 -2.0444 3.5102 36 1 8.2968 -1.8344 5.1311 37 1 9.7746 1.5045 2.4487 38 1 12.1577 1.9750 2.8519 39 1 13.2761 1.0500 4.8405 40 1 9.6259 -0.8162 6.0237 41 1 7.6678 0.6181 6.0629 42 1 6.6116 1.4373 4.8331 43 1 2.1943 -4.1312 3.6742 44 1 1.7903 -2.9179 4.9165 45 1 -0.1466 -4.4420 4.1977 46 1 -0.4664 -2.6941 4.0826 47 1 0.5526 -4.3767 1.7520 48 1 -1.1714 -4.0401 2.0384 49 1 -0.0416 -2.4425 0.4147 50 1 -0.8122 -1.6498 1.8123 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:09:01 Heat of formation + Delta-G solvation = 21.347542 kcal Electronic energy + Delta-G solvation = -32889.673862 eV Core-core repulsion = 28489.201627 eV Total energy + Delta-G solvation = -4400.472235 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.139 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.74255 -41.41632 -40.08439 -38.71806 -37.99046 -37.34614 -36.88900 -34.42521 -33.51898 -31.76611 -31.64904 -31.19485 -29.43845 -26.80806 -26.63533 -26.08437 -24.53791 -24.17406 -23.49939 -22.48340 -21.62524 -21.22459 -20.15336 -19.35606 -18.63165 -18.35993 -18.03034 -17.00666 -16.88543 -16.56065 -16.44441 -16.20621 -15.96373 -15.76435 -15.39092 -15.21956 -15.18769 -15.12864 -14.84296 -14.64941 -14.53492 -14.39544 -14.25135 -14.11193 -13.88200 -13.48442 -13.41256 -13.17116 -12.93128 -12.84702 -12.51966 -12.46970 -12.39445 -12.18001 -12.07435 -12.02843 -11.88264 -11.79971 -11.74501 -11.56830 -11.12841 -10.90367 -10.72541 -10.03392 -9.79149 -9.56700 -9.53015 -8.99061 -4.89764 0.22731 0.32435 0.73554 1.06159 1.18726 1.50659 1.65114 1.83266 2.06313 2.41081 2.55192 2.66258 3.13576 3.52604 3.54145 3.59452 3.70954 3.72757 3.78535 3.81085 3.83758 3.91669 4.02941 4.12579 4.15944 4.31222 4.32797 4.36109 4.36927 4.38477 4.45149 4.49396 4.63256 4.66004 4.75180 4.76997 4.79028 4.82027 4.82623 4.91481 4.96676 4.99633 5.01999 5.07379 5.09236 5.17163 5.18900 5.26121 5.32278 5.44692 5.60101 5.73037 5.77447 5.91216 6.09128 6.23140 6.53311 6.72689 7.40652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.059 4.059 3 Si 0.797 3.203 4 C 0.019 3.981 5 C -0.164 4.164 6 C -0.254 4.254 7 C 0.593 3.407 8 O -0.589 6.589 9 N -0.695 5.695 10 C 0.118 3.882 11 H 0.080 0.920 12 C -0.144 4.144 13 C -0.061 4.061 14 H 0.125 0.875 15 C -0.061 4.061 16 C -0.111 4.111 17 C -0.108 4.108 18 C -0.129 4.129 19 C -0.050 4.050 20 Cl -0.085 7.085 21 C -0.119 4.119 22 C -0.126 4.126 23 C 0.097 3.903 24 C -0.053 4.053 25 C -0.125 4.125 26 C -0.134 4.134 27 C 0.113 3.887 28 N -0.429 5.429 29 H 0.400 0.600 30 H 0.100 0.900 31 H -0.280 1.280 32 H -0.309 1.309 33 H 0.188 0.812 34 H 0.416 0.584 35 H 0.069 0.931 36 H 0.089 0.911 37 H 0.155 0.845 38 H 0.153 0.847 39 H 0.137 0.863 40 H 0.133 0.867 41 H 0.094 0.906 42 H 0.092 0.908 43 H 0.082 0.918 44 H 0.080 0.920 45 H 0.090 0.910 46 H 0.063 0.937 47 H 0.072 0.928 48 H 0.107 0.893 49 H 0.099 0.901 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.065 3.377 -8.272 8.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.167 4.167 3 Si 0.700 3.300 4 C -0.090 4.090 5 C -0.187 4.187 6 C -0.263 4.263 7 C 0.383 3.617 8 O -0.471 6.471 9 N -0.346 5.346 10 C 0.012 3.988 11 H 0.098 0.902 12 C -0.183 4.183 13 C -0.079 4.079 14 H 0.143 0.857 15 C -0.061 4.061 16 C -0.129 4.129 17 C -0.126 4.126 18 C -0.147 4.147 19 C -0.076 4.076 20 Cl -0.056 7.056 21 C -0.138 4.138 22 C -0.164 4.164 23 C -0.021 4.021 24 C -0.091 4.091 25 C -0.162 4.162 26 C -0.172 4.172 27 C -0.008 4.008 28 N -0.104 5.104 29 H 0.251 0.749 30 H 0.118 0.882 31 H -0.207 1.207 32 H -0.236 1.236 33 H 0.205 0.795 34 H 0.253 0.747 35 H 0.088 0.912 36 H 0.107 0.893 37 H 0.172 0.828 38 H 0.171 0.829 39 H 0.155 0.845 40 H 0.151 0.849 41 H 0.112 0.888 42 H 0.111 0.889 43 H 0.100 0.900 44 H 0.098 0.902 45 H 0.109 0.891 46 H 0.081 0.919 47 H 0.091 0.909 48 H 0.125 0.875 49 H 0.118 0.882 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.504 3.148 -7.133 7.940 hybrid contribution -0.909 -0.163 -0.211 0.947 sum -2.413 2.985 -7.343 8.286 Atomic orbital electron populations 1.86496 1.18152 1.80770 1.51536 1.24724 0.84208 1.11701 0.96029 0.93656 0.89909 0.70196 0.76212 1.20070 0.95508 0.94735 0.98680 1.21944 0.98702 1.02657 0.95414 1.19927 0.98070 1.05925 1.02414 1.17516 0.81299 0.79774 0.83109 1.90741 1.80085 1.38656 1.37636 1.45255 1.19457 1.38367 1.31490 1.21778 0.86420 0.98348 0.92281 0.90175 1.23548 0.96496 0.96534 1.01716 1.21630 0.89303 0.96159 1.00776 0.85674 1.19823 0.95986 0.96650 0.93679 1.21532 0.94194 0.97414 0.99778 1.21456 0.95325 0.99127 0.96661 1.21302 1.01013 0.97763 0.94639 1.21118 0.94142 1.01207 0.91134 1.98381 1.80738 1.85316 1.41167 1.21035 0.92561 1.01175 0.99012 1.23369 0.96459 0.97046 0.99513 1.20592 0.91999 0.98589 0.90946 1.20426 0.96756 0.94728 0.97165 1.21696 0.94616 1.03293 0.96637 1.21943 1.04620 0.95420 0.95184 1.22135 0.82130 0.94956 1.01536 1.44031 1.17807 1.27394 1.21207 0.74896 0.88186 1.20675 1.23648 0.79542 0.74699 0.91174 0.89259 0.82754 0.82925 0.84509 0.84886 0.88758 0.88926 0.89960 0.90173 0.89110 0.91858 0.90923 0.87491 0.88228 0.90046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.55 10.65 -148.98 -1.59 -0.03 16 2 C -0.06 0.23 2.98 71.24 0.21 0.44 16 3 Si 0.80 -4.37 31.10 68.60 2.13 -2.24 16 4 C 0.02 0.03 6.19 40.99 0.25 0.28 16 5 C -0.16 -0.03 9.08 23.64 0.21 0.18 16 6 C -0.25 -1.65 6.28 -19.12 -0.12 -1.77 16 7 C 0.59 4.94 7.81 86.62 0.68 5.62 16 8 O -0.59 -9.42 14.94 -4.11 -0.06 -9.48 16 9 N -0.69 -0.36 5.26 -443.45 -2.33 -2.69 16 10 C 0.12 0.05 4.32 45.52 0.20 0.25 16 11 H 0.08 0.47 7.46 -2.39 -0.02 0.45 16 12 C -0.14 0.16 7.25 31.12 0.23 0.39 16 13 C -0.06 0.31 3.86 -11.01 -0.04 0.27 16 14 H 0.13 -1.18 8.09 -2.39 -0.02 -1.20 16 15 C -0.06 0.13 5.29 -19.87 -0.11 0.02 16 16 C -0.11 0.43 9.71 22.27 0.22 0.65 16 17 C -0.11 0.29 10.05 22.27 0.22 0.51 16 18 C -0.13 -0.10 9.83 22.29 0.22 0.12 16 19 C -0.05 -0.16 6.32 22.32 0.14 -0.02 16 20 Cl -0.08 -0.42 28.96 -2.72 -0.08 -0.49 16 21 C -0.12 -0.15 8.41 22.29 0.19 0.04 16 22 C -0.13 0.54 7.29 31.12 0.23 0.76 16 23 C 0.10 0.69 6.57 41.69 0.27 0.97 16 24 C -0.05 -0.31 5.32 30.07 0.16 -0.15 16 25 C -0.12 -0.05 5.98 30.78 0.18 0.13 16 26 C -0.13 0.31 5.92 30.69 0.18 0.49 16 27 C 0.11 -0.01 5.32 86.33 0.46 0.45 16 28 N -0.43 -1.74 3.11 -493.61 -1.54 -3.28 16 29 H 0.40 -4.26 8.74 -74.06 -0.65 -4.91 16 30 H 0.10 -0.81 7.96 -2.39 -0.02 -0.83 16 31 H -0.28 0.56 7.11 99.48 0.71 1.27 16 32 H -0.31 -1.30 7.11 99.48 0.71 -0.59 16 33 H 0.19 -1.60 6.51 -2.91 -0.02 -1.62 16 34 H 0.42 -2.52 7.83 -92.71 -0.73 -3.24 16 35 H 0.07 0.04 8.14 -2.38 -0.02 0.02 16 36 H 0.09 -0.02 6.30 -2.39 -0.02 -0.03 16 37 H 0.15 -1.43 8.05 -2.91 -0.02 -1.45 16 38 H 0.15 -1.11 8.06 -2.91 -0.02 -1.14 16 39 H 0.14 -0.15 8.06 -2.91 -0.02 -0.17 16 40 H 0.13 0.07 6.64 -2.91 -0.02 0.05 16 41 H 0.09 -0.30 7.73 -2.39 -0.02 -0.32 16 42 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 43 H 0.08 0.51 8.14 -2.38 -0.02 0.49 16 44 H 0.08 0.75 7.40 -2.39 -0.02 0.73 16 45 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 46 H 0.06 0.10 8.12 -2.39 -0.02 0.08 16 47 H 0.07 -0.11 8.11 -2.39 -0.02 -0.13 16 48 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 49 H 0.10 -0.20 7.69 -2.39 -0.02 -0.22 16 50 H 0.08 0.06 8.00 -2.39 -0.02 0.05 16 Total: 0.00 -22.95 413.48 0.18 -22.78 By element: Atomic # 1 Polarization: -13.86 SS G_CDS: -0.35 Total: -14.21 kcal Atomic # 6 Polarization: 5.66 SS G_CDS: 3.99 Total: 9.64 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -3.87 Total: -5.97 kcal Atomic # 8 Polarization: -7.86 SS G_CDS: -1.65 Total: -9.51 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: 2.13 Total: -2.24 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -0.08 Total: -0.49 kcal Total: -22.95 0.18 -22.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.125 kcal (2) G-P(sol) polarization free energy of solvation -22.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.777 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.348 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds