Wall clock time and date at job start Mon Mar 8 2021 02:09:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86295 * 109.47459 * 2 1 4 4 C 1.50700 * 109.47062 * 120.00277 * 2 1 3 5 5 C 1.38259 * 119.94835 * 64.99878 * 4 2 1 6 6 C 1.38145 * 120.06180 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.93867 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05527 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00356 * 179.97438 * 8 7 6 10 10 C 1.52997 * 109.47503 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47212 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 9 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 13 11 10 15 15 H 1.09003 * 112.85441 * 23.80863 * 14 13 11 16 16 C 1.53785 * 113.61126 * 155.00450 * 14 13 11 17 17 C 1.53779 * 87.08111 * 89.11843 * 16 14 13 18 18 H 1.09006 * 113.61169 * 270.88392 * 17 16 14 19 19 C 1.50699 * 113.61393 * 140.06693 * 17 16 14 20 20 C 1.38220 * 119.98949 * 119.99689 * 19 17 16 21 21 C 1.38267 * 120.02359 * 179.97438 * 20 19 17 22 22 C 1.38193 * 120.01327 * 0.04716 * 21 20 19 23 23 C 1.38382 * 119.98651 * 359.97359 * 22 21 20 24 24 Cl 1.73600 * 120.01152 * 179.97438 * 23 22 21 25 25 C 1.38235 * 119.99278 * 299.71883 * 19 17 16 26 26 C 1.53781 * 87.08464 * 25.43144 * 17 16 14 27 27 C 1.38728 * 119.88868 * 0.27368 * 7 6 5 28 28 C 1.38148 * 119.94480 * 359.47379 * 27 7 6 29 29 H 0.96706 * 114.00424 * 299.99896 * 1 2 3 30 30 H 1.09003 * 109.47203 * 239.99842 * 2 1 3 31 31 H 1.48490 * 110.00332 * 178.68217 * 3 2 1 32 32 H 1.48505 * 109.99953 * 300.00279 * 3 2 1 33 33 H 1.08008 * 119.97239 * 359.97438 * 5 4 2 34 34 H 1.07998 * 120.03366 * 179.97438 * 6 5 4 35 35 H 1.09002 * 109.46880 * 60.00021 * 9 8 7 36 36 H 1.08998 * 109.47064 * 300.00846 * 9 8 7 37 37 H 1.09002 * 109.47153 * 60.00043 * 10 9 8 38 38 H 1.09001 * 109.46832 * 300.00234 * 10 9 8 39 39 H 0.96995 * 120.00011 * 0.02562 * 13 11 10 40 40 H 1.09001 * 113.60931 * 203.66519 * 16 14 13 41 41 H 1.08995 * 113.61194 * 334.56551 * 16 14 13 42 42 H 1.07995 * 119.99256 * 359.97438 * 20 19 17 43 43 H 1.07994 * 119.99866 * 180.02562 * 21 20 19 44 44 H 1.08001 * 120.00997 * 180.02562 * 22 21 20 45 45 H 1.08000 * 120.00507 * 0.02571 * 25 19 17 46 46 H 1.08992 * 113.61652 * 220.02349 * 26 17 16 47 47 H 1.09001 * 113.61195 * 89.11588 * 26 17 16 48 48 H 1.08004 * 120.02452 * 179.72319 * 27 7 6 49 49 H 1.08002 * 119.97189 * 180.22949 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1438 -2.7142 2.5240 7 6 2.8548 -2.0149 3.4884 8 8 3.3087 -2.6558 4.5976 9 6 4.0337 -1.8730 5.5481 10 6 4.4608 -2.7598 6.7194 11 6 5.2249 -1.9341 7.7222 12 8 5.4091 -0.7525 7.5201 13 7 5.7025 -2.5085 8.8440 14 6 6.4447 -1.7057 9.8190 15 1 6.2056 -0.6437 9.7627 16 6 6.3972 -2.2728 11.2477 17 6 7.6508 -3.0851 10.8826 18 1 7.4283 -4.0597 10.4478 19 6 8.6674 -3.1579 11.9927 20 6 9.0362 -4.3844 12.5124 21 6 9.9693 -4.4520 13.5306 22 6 10.5329 -3.2932 14.0297 23 6 10.1637 -2.0650 13.5100 24 17 10.8709 -0.6088 14.1370 25 6 9.2351 -1.9984 12.4869 26 6 7.9542 -1.9990 9.8371 27 6 3.0972 -0.6592 3.3212 28 6 2.6397 -0.0113 2.1901 29 1 -0.3934 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 3.5345 1.7702 0.0321 32 1 1.5615 2.4679 -1.2085 33 1 1.1307 -2.6046 0.6459 34 1 1.9500 -3.7687 2.6540 35 1 3.3983 -1.0669 5.9151 36 1 4.9181 -1.4501 5.0716 37 1 5.0964 -3.5656 6.3522 38 1 3.5766 -3.1830 7.1960 39 1 5.5547 -3.4534 9.0058 40 1 6.5717 -1.5243 12.0206 41 1 5.5196 -2.8887 11.4439 42 1 8.5955 -5.2903 12.1232 43 1 10.2574 -5.4106 13.9361 44 1 11.2620 -3.3461 14.8247 45 1 8.9498 -1.0405 12.0778 46 1 8.3335 -2.3939 8.8947 47 1 8.5544 -1.1756 10.2244 48 1 3.6466 -0.1117 4.0728 49 1 2.8313 1.0433 2.0578 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:09:14 Heat of formation + Delta-G solvation = -31.514519 kcal Electronic energy + Delta-G solvation = -30898.485725 eV Core-core repulsion = 26398.002557 eV Total energy + Delta-G solvation = -4500.483168 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.127 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -41.68959 -41.26976 -40.44596 -39.25118 -38.83574 -37.39949 -37.16443 -34.65415 -33.32485 -32.10329 -31.75575 -31.70475 -31.26862 -26.95507 -26.71607 -26.21322 -25.36073 -23.81994 -23.47268 -22.59870 -22.22377 -21.54462 -20.16478 -19.54109 -18.47590 -18.23720 -17.64984 -17.46909 -17.17092 -16.90374 -16.57765 -16.44007 -16.34416 -16.07068 -15.89691 -15.61244 -15.33789 -15.11751 -14.74192 -14.69038 -14.65909 -14.46239 -14.31401 -14.24285 -14.09126 -13.58080 -13.52966 -13.47958 -13.00244 -12.85983 -12.79823 -12.57905 -12.45212 -12.21445 -12.13639 -12.04072 -11.82151 -11.77461 -11.71290 -11.64906 -11.21150 -11.06387 -10.41576 -10.12757 -10.04529 -9.84471 -9.61583 -9.21801 -5.01647 0.17024 0.26783 0.28087 0.30283 1.14296 1.31826 1.51312 1.61930 1.69209 1.94618 2.47354 2.60074 2.65731 3.44438 3.54603 3.57358 3.63181 3.67468 3.72725 3.83569 3.85144 3.89656 3.91473 3.96040 4.03228 4.06463 4.23894 4.26240 4.30343 4.34546 4.43414 4.44531 4.50068 4.58960 4.65578 4.70146 4.71812 4.75538 4.78769 4.85426 4.95345 4.97439 4.99132 5.01272 5.14308 5.17805 5.26089 5.28493 5.38070 5.49434 5.50380 5.62748 5.71780 5.85190 6.32166 6.47016 6.78398 7.16892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.065 4.065 3 Si 0.767 3.233 4 C -0.162 4.162 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.321 6.321 9 C 0.072 3.928 10 C -0.132 4.132 11 C 0.522 3.478 12 O -0.582 6.582 13 N -0.697 5.697 14 C 0.116 3.884 15 H 0.084 0.916 16 C -0.126 4.126 17 C -0.064 4.064 18 H 0.122 0.878 19 C -0.062 4.062 20 C -0.113 4.113 21 C -0.108 4.108 22 C -0.128 4.128 23 C -0.049 4.049 24 Cl -0.083 7.083 25 C -0.119 4.119 26 C -0.145 4.145 27 C -0.210 4.210 28 C -0.078 4.078 29 H 0.395 0.605 30 H 0.107 0.893 31 H -0.290 1.290 32 H -0.298 1.298 33 H 0.139 0.861 34 H 0.142 0.858 35 H 0.068 0.932 36 H 0.063 0.937 37 H 0.127 0.873 38 H 0.129 0.871 39 H 0.420 0.580 40 H 0.094 0.906 41 H 0.093 0.907 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.137 0.863 45 H 0.135 0.865 46 H 0.071 0.929 47 H 0.089 0.911 48 H 0.141 0.859 49 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.388 -5.318 4.217 6.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.674 3.326 4 C -0.163 4.163 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.171 4.171 11 C 0.310 3.690 12 O -0.462 6.462 13 N -0.349 5.349 14 C 0.010 3.990 15 H 0.102 0.898 16 C -0.164 4.164 17 C -0.082 4.082 18 H 0.140 0.860 19 C -0.062 4.062 20 C -0.131 4.131 21 C -0.126 4.126 22 C -0.147 4.147 23 C -0.075 4.075 24 Cl -0.054 7.054 25 C -0.137 4.137 26 C -0.184 4.184 27 C -0.228 4.228 28 C -0.096 4.096 29 H 0.245 0.755 30 H 0.124 0.876 31 H -0.217 1.217 32 H -0.226 1.226 33 H 0.157 0.843 34 H 0.160 0.840 35 H 0.086 0.914 36 H 0.082 0.918 37 H 0.145 0.855 38 H 0.147 0.853 39 H 0.258 0.742 40 H 0.113 0.887 41 H 0.112 0.888 42 H 0.170 0.830 43 H 0.170 0.830 44 H 0.155 0.845 45 H 0.153 0.847 46 H 0.090 0.910 47 H 0.108 0.892 48 H 0.158 0.842 49 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -0.651 -4.276 3.247 5.409 hybrid contribution 0.593 -0.344 0.065 0.689 sum -0.058 -4.620 3.312 5.685 Atomic orbital electron populations 1.86459 1.17275 1.82151 1.50486 1.25030 0.85204 1.10273 0.97051 0.93822 0.77841 0.76000 0.84942 1.20321 1.02722 0.95298 0.97968 1.20980 0.96674 0.93742 0.96437 1.20669 1.01793 1.01369 0.93875 1.19176 0.94543 0.91341 0.87133 1.85954 1.69162 1.38849 1.29495 1.22467 0.95767 0.93741 0.88411 1.21434 1.03079 0.99093 0.93533 1.20658 0.78369 0.87505 0.82496 1.90746 1.59949 1.18163 1.77363 1.45504 1.55427 1.13972 1.19994 1.21811 0.91895 0.96179 0.89102 0.89750 1.23365 0.98121 0.99780 0.95084 1.21647 0.93449 0.99984 0.93089 0.85958 1.19816 0.97066 0.92274 0.97092 1.21512 0.97131 0.98193 0.96288 1.21448 0.96172 0.98534 0.96448 1.21311 1.01255 0.90978 1.01140 1.21124 0.99553 0.87832 0.99000 1.98385 1.83337 1.37126 1.86599 1.21037 0.96621 1.00033 0.96030 1.23555 0.96267 0.99116 0.99446 1.21429 1.06434 0.93925 1.01027 1.20990 0.96015 0.99868 0.92717 0.75540 0.87584 1.21700 1.22590 0.84327 0.84018 0.91384 0.91820 0.85496 0.85290 0.74227 0.88723 0.88845 0.83043 0.83042 0.84476 0.84704 0.91024 0.89217 0.84152 0.83754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.59 12.83 -148.98 -1.91 -2.50 16 2 C -0.07 -0.04 2.80 71.24 0.20 0.16 16 3 Si 0.77 -0.49 29.80 68.60 2.04 1.55 16 4 C -0.16 -0.25 5.35 -19.85 -0.11 -0.35 16 5 C -0.06 -0.13 9.68 22.25 0.22 0.09 16 6 C -0.16 -0.41 9.99 22.37 0.22 -0.19 16 7 C 0.12 0.44 6.69 22.51 0.15 0.59 16 8 O -0.32 -0.73 10.14 -92.43 -0.94 -1.67 16 9 C 0.07 -0.04 4.03 71.98 0.29 0.25 16 10 C -0.13 0.81 6.07 29.85 0.18 0.99 16 11 C 0.52 -0.69 7.83 87.66 0.69 0.00 16 12 O -0.58 -4.77 15.58 -3.03 -0.05 -4.82 16 13 N -0.70 4.58 5.26 -440.02 -2.32 2.27 16 14 C 0.12 -0.48 4.32 45.52 0.20 -0.29 16 15 H 0.08 0.08 7.46 -2.39 -0.02 0.07 16 16 C -0.13 0.93 7.29 31.12 0.23 1.16 16 17 C -0.06 0.48 3.85 -11.01 -0.04 0.43 16 18 H 0.12 -1.39 8.09 -2.38 -0.02 -1.41 16 19 C -0.06 0.22 5.29 -19.87 -0.11 0.11 16 20 C -0.11 0.53 9.71 22.27 0.22 0.74 16 21 C -0.11 0.35 10.05 22.27 0.22 0.58 16 22 C -0.13 0.00 9.83 22.29 0.22 0.22 16 23 C -0.05 -0.10 6.32 22.33 0.14 0.04 16 24 Cl -0.08 -0.31 28.96 -2.72 -0.08 -0.39 16 25 C -0.12 0.03 8.41 22.29 0.19 0.22 16 26 C -0.15 0.63 7.26 31.12 0.23 0.86 16 27 C -0.21 -0.48 9.04 22.37 0.20 -0.27 16 28 C -0.08 -0.06 8.66 22.25 0.19 0.13 16 29 H 0.39 -2.69 8.70 -74.05 -0.64 -3.33 16 30 H 0.11 0.17 7.96 -2.39 -0.02 0.15 16 31 H -0.29 -1.34 7.11 99.48 0.71 -0.63 16 32 H -0.30 -1.97 7.11 99.48 0.71 -1.26 16 33 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 34 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 35 H 0.07 0.04 7.61 -2.39 -0.02 0.02 16 36 H 0.06 0.07 7.63 -2.39 -0.02 0.06 16 37 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 38 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 39 H 0.42 -5.51 8.70 -92.71 -0.81 -6.31 16 40 H 0.09 -0.56 7.73 -2.39 -0.02 -0.58 16 41 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 42 H 0.15 -1.46 8.05 -2.91 -0.02 -1.48 16 43 H 0.15 -1.16 8.06 -2.91 -0.02 -1.18 16 44 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 45 H 0.14 -0.19 6.65 -2.91 -0.02 -0.21 16 46 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 47 H 0.09 -0.27 6.31 -2.39 -0.02 -0.28 16 48 H 0.14 0.06 6.30 -2.91 -0.02 0.04 16 49 H 0.15 -0.48 4.90 -2.91 -0.01 -0.50 16 Total: 0.00 -21.02 420.14 0.07 -20.95 By element: Atomic # 1 Polarization: -20.47 SS G_CDS: -0.41 Total: -20.88 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: 3.72 Total: 5.49 kcal Atomic # 7 Polarization: 4.58 SS G_CDS: -2.32 Total: 2.27 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -2.90 Total: -8.99 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: 2.04 Total: 1.55 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -0.08 Total: -0.39 kcal Total: -21.02 0.07 -20.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.560 kcal (2) G-P(sol) polarization free energy of solvation -21.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds