Wall clock time and date at job start Mon Mar 8 2021 02:09:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 240.00515 * 2 1 3 5 5 C 1.38244 * 119.97491 * 119.72203 * 4 2 1 6 6 C 1.38283 * 120.11200 * 179.76679 * 5 4 2 7 7 C 1.38130 * 120.05429 * 0.50914 * 6 5 4 8 8 C 1.38751 * 119.94324 * 359.74770 * 7 6 5 9 9 O 1.35900 * 120.05239 * 179.97438 * 8 7 6 10 10 C 1.42897 * 117.00288 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47089 * 180.02562 * 10 9 8 12 12 C 1.53000 * 109.47094 * 180.02562 * 11 10 9 13 13 C 1.50703 * 109.47449 * 180.02562 * 12 11 10 14 14 O 1.21284 * 119.99857 * 359.97438 * 13 12 11 15 15 N 1.34773 * 120.00341 * 179.97438 * 13 12 11 16 16 C 1.46497 * 120.00179 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.85306 * 336.20264 * 16 15 13 18 18 C 1.53790 * 113.61090 * 107.50422 * 16 15 13 19 19 C 1.53778 * 87.07653 * 89.11717 * 18 16 15 20 20 H 1.08999 * 113.61611 * 270.87610 * 19 18 16 21 21 C 1.50708 * 113.68390 * 139.99254 * 19 18 16 22 22 C 1.38216 * 119.99298 * 322.18212 * 21 19 18 23 23 C 1.38271 * 120.02381 * 179.77091 * 22 21 19 24 24 C 1.38198 * 120.01077 * 0.50912 * 23 22 21 25 25 C 1.38374 * 119.98559 * 359.74633 * 24 23 22 26 26 Cl 1.73598 * 120.01033 * 179.97438 * 25 24 23 27 27 C 1.38241 * 119.99124 * 142.46320 * 21 19 18 28 28 C 1.53776 * 113.61806 * 205.00280 * 16 15 13 29 29 C 1.38166 * 119.96660 * 299.99525 * 4 2 1 30 30 H 0.96695 * 114.00385 * 60.00159 * 1 2 3 31 31 H 1.09001 * 109.47626 * 120.00659 * 2 1 3 32 32 H 1.48493 * 110.00250 * 298.68268 * 3 2 1 33 33 H 1.48504 * 109.99999 * 60.00466 * 3 2 1 34 34 H 1.08001 * 119.94451 * 359.97438 * 5 4 2 35 35 H 1.07998 * 119.97599 * 180.23111 * 6 5 4 36 36 H 1.07996 * 120.02813 * 179.72007 * 7 6 5 37 37 H 1.08996 * 109.46899 * 300.00586 * 10 9 8 38 38 H 1.08997 * 109.47080 * 60.00416 * 10 9 8 39 39 H 1.08996 * 109.47624 * 300.00015 * 11 10 9 40 40 H 1.09002 * 109.47345 * 59.99999 * 11 10 9 41 41 H 1.09007 * 109.47154 * 300.00089 * 12 11 10 42 42 H 1.08997 * 109.47166 * 60.00233 * 12 11 10 43 43 H 0.96998 * 119.99891 * 359.97438 * 15 13 12 44 44 H 1.09001 * 113.60992 * 203.67051 * 18 16 15 45 45 H 1.08995 * 113.61348 * 334.56875 * 18 16 15 46 46 H 1.07997 * 119.98977 * 0.02562 * 22 21 19 47 47 H 1.07991 * 119.99181 * 180.25966 * 23 22 21 48 48 H 1.07996 * 120.00220 * 179.77097 * 24 23 22 49 49 H 1.07998 * 120.00403 * 359.95741 * 27 21 19 50 50 H 1.08996 * 113.61205 * 25.42986 * 28 16 15 51 51 H 1.08999 * 113.61812 * 156.25447 * 28 16 15 52 52 H 1.07999 * 120.03143 * 359.96296 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7213 -0.0362 -2.1431 6 6 3.1878 -0.6866 -3.2707 7 6 2.8566 -2.0090 -3.4934 8 6 2.0594 -2.6863 -2.5817 9 8 1.7318 -3.9872 -2.7988 10 6 2.2433 -4.5956 -3.9863 11 6 1.7718 -6.0493 -4.0582 12 6 2.3200 -6.7010 -5.3293 13 6 1.8552 -8.1327 -5.4006 14 8 1.1548 -8.5874 -4.5210 15 7 2.2178 -8.9080 -6.4417 16 6 1.7663 -10.3000 -6.5106 17 1 1.5177 -10.7133 -5.5331 18 6 0.6866 -10.5452 -7.5779 19 6 1.8348 -10.8129 -8.5651 20 1 2.1894 -9.9175 -9.0755 21 6 1.5676 -11.9573 -9.5086 22 6 0.9039 -13.0831 -9.0588 23 6 0.6543 -14.1314 -9.9251 24 6 1.0776 -14.0585 -11.2386 25 6 1.7467 -12.9338 -11.6881 26 17 2.2794 -12.8417 -13.3378 27 6 1.9916 -11.8831 -10.8223 28 6 2.6865 -11.2054 -7.3462 29 6 1.5972 -2.0331 -1.4486 30 1 -0.3934 0.4416 -0.7650 31 1 1.7924 -0.5139 0.8899 32 1 1.5878 2.4586 -1.2241 33 1 1.5615 2.4679 1.2086 34 1 2.9774 0.9992 -1.9732 35 1 3.8079 -0.1590 -3.9802 36 1 3.2174 -2.5152 -4.3765 37 1 1.8795 -4.0524 -4.8585 38 1 3.3327 -4.5670 -3.9689 39 1 2.1352 -6.5928 -3.1861 40 1 0.6823 -6.0776 -4.0758 41 1 1.9570 -6.1576 -6.2018 42 1 3.4095 -6.6728 -5.3113 43 1 2.7776 -8.5443 -7.1454 44 1 0.0679 -11.4205 -7.3799 45 1 0.1014 -9.6578 -7.8189 46 1 0.5766 -13.1423 -8.0313 47 1 0.1319 -15.0091 -9.5742 48 1 0.8858 -14.8789 -11.9142 49 1 2.5136 -11.0050 -11.1726 50 1 3.7157 -10.8509 -7.4005 51 1 2.6156 -12.2610 -7.0841 52 1 0.9768 -2.5582 -0.7374 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:09:23 Heat of formation + Delta-G solvation = -38.031641 kcal Electronic energy + Delta-G solvation = -32450.117970 eV Core-core repulsion = 27793.814579 eV Total energy + Delta-G solvation = -4656.303391 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.143 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -41.63261 -41.25767 -40.45049 -39.26333 -38.91766 -37.42599 -37.37084 -34.90244 -34.50909 -32.46164 -32.09798 -31.52241 -31.15023 -28.44649 -26.88451 -26.70535 -26.09174 -23.92661 -23.68860 -23.50470 -22.56163 -21.89264 -21.45184 -20.14394 -19.23283 -18.49268 -17.93647 -17.90759 -17.45784 -17.18383 -17.01319 -16.82427 -16.51098 -16.43258 -16.35201 -16.15696 -15.56201 -15.44214 -15.27439 -14.90317 -14.78034 -14.64659 -14.55366 -14.39034 -14.17628 -14.10057 -13.62640 -13.47751 -13.31181 -13.25186 -13.08097 -12.87825 -12.72636 -12.57359 -12.44896 -12.31336 -12.28577 -12.25596 -11.94030 -11.72673 -11.64888 -11.59607 -11.55142 -11.23989 -10.96780 -10.68181 -10.08397 -9.91363 -9.86686 -9.61463 -9.23620 -4.90829 0.14898 0.22458 0.27051 0.42055 1.13887 1.29681 1.60028 1.62164 1.90287 1.99063 2.38046 2.58822 2.68795 3.39618 3.45291 3.60248 3.62594 3.66522 3.71187 3.85755 3.87282 3.89347 3.96002 3.98924 4.10874 4.12476 4.12817 4.21495 4.26273 4.28065 4.35924 4.42255 4.43263 4.45826 4.56164 4.62372 4.66255 4.69064 4.70810 4.76385 4.87357 4.94100 4.98915 5.00138 5.00980 5.02173 5.14723 5.18604 5.25104 5.30123 5.37380 5.39830 5.46342 5.49970 5.65389 5.75869 5.83238 6.44126 6.45956 6.53758 7.25675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.093 4.093 3 Si 0.782 3.218 4 C -0.082 4.082 5 C -0.160 4.160 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.340 6.340 10 C 0.058 3.942 11 C -0.102 4.102 12 C -0.127 4.127 13 C 0.511 3.489 14 O -0.589 6.589 15 N -0.701 5.701 16 C 0.113 3.887 17 H 0.082 0.918 18 C -0.142 4.142 19 C -0.065 4.065 20 H 0.114 0.886 21 C -0.061 4.061 22 C -0.118 4.118 23 C -0.108 4.108 24 C -0.128 4.128 25 C -0.047 4.047 26 Cl -0.081 7.081 27 C -0.116 4.116 28 C -0.124 4.124 29 C -0.153 4.153 30 H 0.386 0.614 31 H 0.121 0.879 32 H -0.278 1.278 33 H -0.304 1.304 34 H 0.148 0.852 35 H 0.159 0.841 36 H 0.154 0.846 37 H 0.082 0.918 38 H 0.085 0.915 39 H 0.060 0.940 40 H 0.058 0.942 41 H 0.128 0.872 42 H 0.130 0.870 43 H 0.419 0.581 44 H 0.096 0.904 45 H 0.068 0.932 46 H 0.144 0.856 47 H 0.150 0.850 48 H 0.138 0.862 49 H 0.142 0.858 50 H 0.089 0.911 51 H 0.100 0.900 52 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.724 1.728 -5.044 8.581 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.687 3.313 4 C -0.083 4.083 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.140 4.140 12 C -0.167 4.167 13 C 0.299 3.701 14 O -0.469 6.469 15 N -0.353 5.353 16 C 0.007 3.993 17 H 0.100 0.900 18 C -0.181 4.181 19 C -0.083 4.083 20 H 0.132 0.868 21 C -0.061 4.061 22 C -0.136 4.136 23 C -0.126 4.126 24 C -0.146 4.146 25 C -0.074 4.074 26 Cl -0.052 7.052 27 C -0.135 4.135 28 C -0.162 4.162 29 C -0.172 4.172 30 H 0.235 0.765 31 H 0.138 0.862 32 H -0.204 1.204 33 H -0.233 1.233 34 H 0.165 0.835 35 H 0.177 0.823 36 H 0.171 0.829 37 H 0.101 0.899 38 H 0.103 0.897 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.146 0.854 42 H 0.148 0.852 43 H 0.256 0.744 44 H 0.114 0.886 45 H 0.087 0.913 46 H 0.162 0.838 47 H 0.167 0.833 48 H 0.156 0.844 49 H 0.159 0.841 50 H 0.108 0.892 51 H 0.118 0.882 52 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 6.050 1.775 -3.929 7.428 hybrid contribution -1.208 -0.481 -1.009 1.646 sum 4.842 1.294 -4.938 7.035 Atomic orbital electron populations 1.86571 1.18664 1.80535 1.50115 1.25438 0.83441 1.12700 0.98462 0.93894 0.90112 0.70903 0.76432 1.20137 0.97872 0.93334 0.96925 1.21189 1.00353 1.00865 0.95348 1.21310 0.97387 0.93513 0.96820 1.21609 1.02678 0.96868 1.01216 1.19201 0.95235 0.83571 0.94910 1.86053 1.71701 1.22910 1.44749 1.22996 0.99760 0.93122 0.85779 1.21155 1.01505 0.93008 0.98371 1.21538 1.04732 0.90504 0.99878 1.21194 0.78979 0.89217 0.80690 1.90741 1.39688 1.75988 1.40435 1.45590 1.53278 1.11339 1.25110 1.21815 0.96217 0.82238 0.98994 0.89968 1.23557 0.96568 1.02730 0.95239 1.21615 0.97493 0.96205 0.92999 0.86762 1.19807 0.97140 0.95966 0.93182 1.21400 0.98212 0.92970 1.00985 1.21411 0.99002 0.99777 0.92403 1.21300 0.98684 0.97303 0.97346 1.21133 1.02476 0.97633 0.86149 1.98384 1.89173 1.98399 1.19241 1.21136 1.01070 0.98351 0.92935 1.23367 0.99065 1.00497 0.93247 1.20324 1.04172 0.94939 0.97718 0.76480 0.86166 1.20428 1.23277 0.83486 0.82311 0.82856 0.89942 0.89661 0.92135 0.92330 0.85430 0.85241 0.74376 0.88562 0.91326 0.83843 0.83255 0.84419 0.84067 0.89203 0.88201 0.86691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.88 12.77 -148.98 -1.90 -4.78 16 2 C -0.09 -0.14 2.82 71.24 0.20 0.06 16 3 Si 0.78 -1.37 29.79 68.60 2.04 0.67 16 4 C -0.08 -0.19 5.39 -19.88 -0.11 -0.29 16 5 C -0.16 0.24 8.67 22.28 0.19 0.43 16 6 C -0.07 0.22 10.04 22.25 0.22 0.45 16 7 C -0.21 0.24 9.04 22.37 0.20 0.44 16 8 C 0.12 0.53 6.69 22.51 0.15 0.68 16 9 O -0.34 -1.95 10.14 -92.42 -0.94 -2.89 16 10 C 0.06 -0.17 4.74 71.98 0.34 0.17 16 11 C -0.10 0.07 4.87 30.59 0.15 0.22 16 12 C -0.13 0.98 5.70 29.85 0.17 1.15 16 13 C 0.51 -0.05 7.83 87.66 0.69 0.64 16 14 O -0.59 -6.57 15.58 -3.04 -0.05 -6.62 16 15 N -0.70 4.04 5.26 -440.03 -2.32 1.72 16 16 C 0.11 -0.40 4.32 45.52 0.20 -0.21 16 17 H 0.08 0.15 7.46 -2.39 -0.02 0.14 16 18 C -0.14 0.62 7.26 31.12 0.23 0.84 16 19 C -0.06 0.44 3.85 -11.01 -0.04 0.40 16 20 H 0.11 -1.09 8.09 -2.39 -0.02 -1.11 16 21 C -0.06 0.18 5.29 -19.87 -0.11 0.08 16 22 C -0.12 0.36 8.60 22.27 0.19 0.56 16 23 C -0.11 0.24 10.05 22.27 0.22 0.46 16 24 C -0.13 -0.03 9.83 22.29 0.22 0.19 16 25 C -0.05 -0.08 6.32 22.32 0.14 0.06 16 26 Cl -0.08 -0.23 28.96 -2.72 -0.08 -0.31 16 27 C -0.12 0.10 9.49 22.29 0.21 0.31 16 28 C -0.12 0.90 7.29 31.12 0.23 1.12 16 29 C -0.15 -0.95 9.55 22.37 0.21 -0.73 16 30 H 0.39 -0.28 8.70 -74.06 -0.64 -0.92 16 31 H 0.12 0.08 7.96 -2.39 -0.02 0.06 16 32 H -0.28 -0.34 7.10 99.48 0.71 0.37 16 33 H -0.30 -1.86 7.11 99.48 0.71 -1.16 16 34 H 0.15 -0.87 4.87 -2.91 -0.01 -0.89 16 35 H 0.16 -1.44 8.06 -2.91 -0.02 -1.46 16 36 H 0.15 -1.04 6.30 -2.91 -0.02 -1.06 16 37 H 0.08 -0.56 7.66 -2.39 -0.02 -0.58 16 38 H 0.09 -0.61 7.66 -2.39 -0.02 -0.63 16 39 H 0.06 0.24 8.10 -2.39 -0.02 0.22 16 40 H 0.06 0.25 8.10 -2.39 -0.02 0.23 16 41 H 0.13 -1.67 8.14 -2.38 -0.02 -1.69 16 42 H 0.13 -1.73 8.14 -2.39 -0.02 -1.75 16 43 H 0.42 -5.27 8.70 -92.71 -0.81 -6.08 16 44 H 0.10 -0.42 6.33 -2.39 -0.02 -0.44 16 45 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 46 H 0.14 -0.91 6.68 -2.91 -0.02 -0.93 16 47 H 0.15 -0.93 8.06 -2.92 -0.02 -0.95 16 48 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 49 H 0.14 -0.51 8.05 -2.91 -0.02 -0.53 16 50 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 51 H 0.10 -0.69 7.72 -2.39 -0.02 -0.71 16 52 H 0.11 1.00 8.06 -2.91 -0.02 0.98 16 Total: 0.00 -25.56 441.54 0.23 -25.33 By element: Atomic # 1 Polarization: -19.70 SS G_CDS: -0.45 Total: -20.15 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: 3.91 Total: 7.03 kcal Atomic # 7 Polarization: 4.04 SS G_CDS: -2.32 Total: 1.72 kcal Atomic # 8 Polarization: -11.40 SS G_CDS: -2.89 Total: -14.29 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: 2.04 Total: 0.67 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.08 Total: -0.31 kcal Total: -25.56 0.23 -25.33 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.703 kcal (2) G-P(sol) polarization free energy of solvation -25.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.329 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds