Wall clock time and date at job start Mon Mar 8 2021 02:10:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38245 * 119.97332 * 245.00335 * 4 2 1 6 6 C 1.38285 * 120.11218 * 179.97438 * 5 4 2 7 7 C 1.38114 * 120.05813 * 359.97438 * 6 5 4 8 8 C 1.38756 * 119.94434 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05883 * 180.02562 * 8 7 6 10 10 C 1.42903 * 116.99613 * 0.02562 * 9 8 7 11 11 C 1.50699 * 109.46855 * 179.97438 * 10 9 8 12 12 O 1.21287 * 119.99952 * 0.02562 * 11 10 9 13 13 N 1.34771 * 120.00100 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00273 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.84992 * 23.80782 * 14 13 11 16 16 C 1.53781 * 113.61496 * 155.00107 * 14 13 11 17 17 C 1.53778 * 87.08077 * 89.11909 * 16 14 13 18 18 H 1.09001 * 113.61485 * 270.79774 * 17 16 14 19 19 C 1.50700 * 113.61513 * 139.98288 * 17 16 14 20 20 C 1.38218 * 119.99766 * 120.00193 * 19 17 16 21 21 C 1.38256 * 120.02903 * 179.97438 * 20 19 17 22 22 C 1.38191 * 120.01648 * 359.97438 * 21 20 19 23 23 C 1.38378 * 119.98171 * 359.97438 * 22 21 20 24 24 Cl 1.73603 * 120.01084 * 180.02562 * 23 22 21 25 25 C 1.38247 * 119.99266 * 299.72319 * 19 17 16 26 26 C 1.53778 * 87.08338 * 25.43290 * 17 16 14 27 27 C 1.38167 * 119.97190 * 64.71938 * 4 2 1 28 28 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 29 29 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 30 30 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 31 31 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 32 32 H 1.08005 * 119.94046 * 359.96792 * 5 4 2 33 33 H 1.08004 * 119.97228 * 179.97438 * 6 5 4 34 34 H 1.08004 * 120.03231 * 180.02562 * 7 6 5 35 35 H 1.08999 * 109.47192 * 299.99471 * 10 9 8 36 36 H 1.08999 * 109.47017 * 59.99850 * 10 9 8 37 37 H 0.97006 * 119.99959 * 0.02562 * 13 11 10 38 38 H 1.09003 * 113.61388 * 203.67184 * 16 14 13 39 39 H 1.08998 * 113.61514 * 334.48735 * 16 14 13 40 40 H 1.08003 * 119.98040 * 359.97341 * 20 19 17 41 41 H 1.07996 * 119.99468 * 179.97438 * 21 20 19 42 42 H 1.07998 * 120.01024 * 179.97438 * 22 21 20 43 43 H 1.08000 * 120.00058 * 0.02562 * 25 19 17 44 44 H 1.08997 * 113.61753 * 220.02202 * 26 17 16 45 45 H 1.09006 * 113.61746 * 89.11097 * 26 17 16 46 46 H 1.08001 * 120.02613 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6386 -0.0117 2.1910 6 6 3.1005 -0.6606 3.3214 7 6 2.8556 -2.0089 3.4938 8 6 2.1450 -2.7123 2.5317 9 8 1.9022 -4.0390 2.6992 10 6 2.4076 -4.6456 3.8902 11 6 2.0439 -6.1080 3.9024 12 8 1.4142 -6.5839 2.9814 13 7 2.4191 -6.8872 4.9360 14 6 2.0650 -8.3087 4.9481 15 1 1.8852 -8.7086 3.9501 16 6 3.0133 -9.1726 5.7962 17 6 2.0885 -8.8774 6.9888 18 1 2.3592 -7.9761 7.5387 19 6 1.8646 -10.0661 7.8877 20 6 2.2295 -10.0039 9.2194 21 6 2.0239 -11.0939 10.0448 22 6 1.4527 -12.2461 9.5389 23 6 1.0862 -12.3086 8.2060 24 17 0.3680 -13.7554 7.5699 25 6 1.2888 -11.2165 7.3816 26 6 0.9641 -8.6608 5.9624 27 6 1.6795 -2.0583 1.4004 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2085 32 1 2.8309 1.0428 2.0582 33 1 3.6532 -0.1126 4.0702 34 1 3.2161 -2.5152 4.3770 35 1 3.4921 -4.5404 3.9195 36 1 1.9713 -4.1558 4.7608 37 1 2.9230 -6.5066 5.6724 38 1 3.0268 -10.2225 5.5034 39 1 4.0124 -8.7497 5.9016 40 1 2.6755 -9.1035 9.6153 41 1 2.3096 -11.0449 11.0851 42 1 1.2925 -13.0976 10.1836 43 1 0.9999 -11.2635 6.3420 44 1 0.3084 -7.8240 6.2031 45 1 0.4173 -9.5708 5.7151 46 1 1.1232 -2.6028 0.6517 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705206_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:10:07 Heat of formation + Delta-G solvation = -23.056890 kcal Electronic energy + Delta-G solvation = -29322.329963 eV Core-core repulsion = 24977.751164 eV Total energy + Delta-G solvation = -4344.578799 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.83925 -41.29726 -40.36059 -39.23433 -38.57787 -37.39515 -37.32600 -34.72911 -32.60193 -32.16172 -31.79712 -31.49974 -29.31531 -26.90342 -26.85262 -26.20605 -23.87658 -23.64659 -23.00290 -22.47820 -21.59596 -20.33897 -19.22762 -18.54093 -18.51991 -18.07404 -17.48689 -17.43151 -17.11165 -16.84990 -16.54335 -16.43347 -15.83824 -15.73251 -15.63630 -15.26593 -15.11333 -14.77949 -14.75257 -14.54478 -14.47101 -14.06272 -13.79859 -13.72948 -13.67427 -13.52274 -13.29804 -13.07205 -12.68768 -12.51331 -12.47023 -12.23120 -12.15832 -11.99215 -11.88689 -11.78957 -11.65977 -11.36209 -10.94256 -10.52840 -10.24779 -9.92695 -9.89954 -9.68677 -9.24643 -4.96919 0.09572 0.17831 0.21625 0.43040 1.14683 1.23536 1.40398 1.42945 1.59382 1.94521 2.49923 2.50490 2.64029 3.25559 3.33415 3.40596 3.45765 3.52922 3.69822 3.72670 3.77990 3.78540 3.88270 3.88776 3.92489 4.03954 4.04879 4.16013 4.21628 4.24326 4.31233 4.44902 4.52238 4.55074 4.57552 4.61495 4.68020 4.79311 4.82812 4.85826 4.95211 4.98615 5.17540 5.23941 5.25751 5.36549 5.36988 5.46810 5.48547 5.65573 5.72390 6.20515 6.36155 6.43761 7.04226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.151 4.151 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.121 3.879 15 H 0.109 0.891 16 C -0.135 4.135 17 C -0.074 4.074 18 H 0.101 0.899 19 C -0.060 4.060 20 C -0.112 4.112 21 C -0.104 4.104 22 C -0.115 4.115 23 C -0.031 4.031 24 Cl -0.068 7.068 25 C -0.109 4.109 26 C -0.145 4.145 27 C -0.119 4.119 28 H 0.381 0.619 29 H 0.079 0.921 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.403 0.597 38 H 0.100 0.900 39 H 0.080 0.920 40 H 0.128 0.872 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.134 0.866 44 H 0.077 0.923 45 H 0.097 0.903 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.095 2.616 3.934 7.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.189 4.189 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.303 3.697 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.127 0.873 16 C -0.173 4.173 17 C -0.092 4.092 18 H 0.120 0.880 19 C -0.060 4.060 20 C -0.130 4.130 21 C -0.122 4.122 22 C -0.133 4.133 23 C -0.058 4.058 24 Cl -0.039 7.039 25 C -0.127 4.127 26 C -0.183 4.183 27 C -0.138 4.138 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.186 1.186 31 H -0.180 1.180 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.237 0.763 38 H 0.119 0.881 39 H 0.098 0.902 40 H 0.146 0.854 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.152 0.848 44 H 0.096 0.904 45 H 0.116 0.884 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.332 2.531 3.594 6.910 hybrid contribution -0.839 -0.158 0.204 0.878 sum 4.492 2.373 3.798 6.343 Atomic orbital electron populations 1.86603 1.17567 1.80217 1.49776 1.24861 0.84688 1.11165 0.98139 0.94965 0.91606 0.74271 0.80184 1.19028 0.96773 0.92742 0.94789 1.20930 1.01475 0.99821 0.94685 1.20875 0.97716 0.93571 0.96902 1.21280 1.04772 0.96066 1.00339 1.18999 0.95465 0.82402 0.94829 1.86170 1.73816 1.20152 1.39934 1.22446 1.00730 0.91722 0.88881 1.20052 0.79726 0.87495 0.82399 1.90797 1.37716 1.74575 1.35045 1.45469 1.58296 1.09342 1.23360 1.21867 0.95850 0.80138 1.00565 0.87343 1.23439 0.98249 1.01183 0.94385 1.21630 0.97786 0.95935 0.93848 0.88041 1.19620 0.97768 0.94464 0.94132 1.21177 0.99764 0.98990 0.93075 1.21155 0.98221 0.92521 1.00299 1.21125 0.99316 0.99303 0.93596 1.20952 1.01321 0.89138 0.94363 1.98399 1.81967 1.36677 1.86870 1.20915 0.99984 0.91644 1.00194 1.23595 0.96572 1.03017 0.95157 1.20249 1.02470 0.93737 0.97314 0.77129 0.90306 1.18629 1.17958 0.85290 0.84996 0.85211 0.88621 0.88730 0.76264 0.88126 0.90181 0.85394 0.84926 0.84879 0.84794 0.90425 0.88441 0.84756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.03 12.81 -35.23 -0.45 -1.48 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.69 -0.56 29.85 -169.99 -5.07 -5.63 16 4 C -0.03 -0.06 5.38 -104.64 -0.56 -0.63 16 5 C -0.15 -0.09 8.67 -39.56 -0.34 -0.43 16 6 C -0.07 0.03 10.04 -39.61 -0.40 -0.37 16 7 C -0.21 0.01 9.04 -39.44 -0.36 -0.35 16 8 C 0.13 0.31 6.69 -39.21 -0.26 0.05 16 9 O -0.29 -0.92 9.67 -39.35 -0.38 -1.30 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 11 C 0.52 0.55 7.91 -10.99 -0.09 0.47 16 12 O -0.51 -3.19 16.10 -14.36 -0.23 -3.42 16 13 N -0.71 1.64 5.26 -53.02 -0.28 1.36 16 14 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 15 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 16 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 17 C -0.07 0.22 3.86 -90.96 -0.35 -0.13 16 18 H 0.10 -0.44 8.09 -51.93 -0.42 -0.86 16 19 C -0.06 0.07 5.29 -104.63 -0.55 -0.48 16 20 C -0.11 0.16 9.71 -39.58 -0.38 -0.22 16 21 C -0.10 0.11 10.04 -39.59 -0.40 -0.28 16 22 C -0.11 0.00 9.83 -39.55 -0.39 -0.39 16 23 C -0.03 -0.02 6.32 -39.50 -0.25 -0.27 16 24 Cl -0.07 -0.10 28.96 -51.86 -1.50 -1.60 16 25 C -0.11 0.02 8.41 -39.55 -0.33 -0.31 16 26 C -0.14 0.27 7.25 -25.92 -0.19 0.08 16 27 C -0.12 -0.37 9.62 -39.43 -0.38 -0.75 16 28 H 0.38 -0.84 8.74 45.56 0.40 -0.44 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 30 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 31 H -0.25 -0.55 7.05 56.52 0.40 -0.15 16 32 H 0.13 -0.15 4.86 -52.48 -0.26 -0.40 16 33 H 0.13 -0.38 8.06 -52.48 -0.42 -0.81 16 34 H 0.13 -0.39 6.30 -52.48 -0.33 -0.72 16 35 H 0.10 -0.37 7.66 -51.93 -0.40 -0.76 16 36 H 0.09 -0.33 7.66 -51.93 -0.40 -0.73 16 37 H 0.40 -2.24 8.70 -40.82 -0.36 -2.60 16 38 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 39 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.13 -0.43 8.05 -52.48 -0.42 -0.86 16 41 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 42 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 43 H 0.13 -0.15 6.64 -52.49 -0.35 -0.49 16 44 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 45 H 0.10 -0.16 6.30 -51.93 -0.33 -0.49 16 46 H 0.13 0.46 8.06 -52.49 -0.42 0.04 16 LS Contribution 399.16 15.07 6.02 6.02 Total: 0.00 -10.32 399.16 -13.12 -23.45 By element: Atomic # 1 Polarization: -7.53 SS G_CDS: -5.80 Total: -13.33 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -5.42 Total: -4.06 kcal Atomic # 7 Polarization: 1.64 SS G_CDS: -0.28 Total: 1.36 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -1.06 Total: -6.20 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.63 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.50 Total: -1.60 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -10.32 -13.12 -23.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.390 kcal (2) G-P(sol) polarization free energy of solvation -10.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds