Wall clock time and date at job start Mon Mar 8 2021 02:10:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35904 * 117.00027 * 2 1 4 4 C 1.38612 * 120.02623 * 180.02562 * 3 2 1 5 5 C 1.38657 * 119.88855 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.02743 * 179.97438 * 5 4 3 7 7 C 1.42901 * 116.99934 * 0.02562 * 6 5 4 8 8 C 1.50698 * 109.47069 * 179.97438 * 7 6 5 9 9 O 1.21275 * 120.00025 * 359.97438 * 8 7 6 10 10 N 1.34782 * 119.99966 * 179.97438 * 8 7 6 11 11 C 1.46498 * 120.00082 * 179.97438 * 10 8 7 12 12 H 1.08993 * 112.85002 * 336.19627 * 11 10 8 13 13 C 1.53778 * 113.61281 * 107.50330 * 11 10 8 14 14 C 1.53770 * 87.08423 * 89.11611 * 13 11 10 15 15 H 1.08999 * 113.69367 * 270.87230 * 14 13 11 16 16 C 1.50706 * 113.61803 * 139.98049 * 14 13 11 17 17 C 1.38191 * 119.99600 * 142.50395 * 16 14 13 18 18 C 1.38375 * 119.98536 * 179.97438 * 17 16 14 19 19 Cl 1.73604 * 120.01042 * 180.02562 * 18 17 16 20 20 C 1.38329 * 119.97458 * 0.02562 * 18 17 16 21 21 C 1.38232 * 119.98743 * 359.97438 * 20 18 17 22 22 C 1.38226 * 120.01242 * 359.97438 * 21 20 18 23 23 C 1.53780 * 113.61366 * 204.99922 * 11 10 8 24 24 C 1.38748 * 119.94526 * 0.25631 * 5 4 3 25 25 C 1.50702 * 119.97317 * 179.74073 * 24 5 4 26 26 O 1.42896 * 109.47625 * 285.00308 * 25 24 5 27 27 Si 1.86300 * 109.47190 * 164.99960 * 25 24 5 28 28 C 1.38202 * 120.05745 * 359.49104 * 24 5 4 29 29 C 1.38158 * 120.10388 * 0.50742 * 28 24 5 30 30 H 1.08997 * 109.47323 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.46794 * 299.99536 * 1 2 3 32 32 H 1.09001 * 109.47617 * 59.99479 * 1 2 3 33 33 H 1.07993 * 120.05658 * 0.04638 * 4 3 2 34 34 H 1.09001 * 109.47516 * 59.99226 * 7 6 5 35 35 H 1.09001 * 109.46944 * 299.99398 * 7 6 5 36 36 H 0.97001 * 119.99644 * 359.97438 * 10 8 7 37 37 H 1.09003 * 113.61869 * 334.56183 * 13 11 10 38 38 H 1.09006 * 113.61155 * 203.66635 * 13 11 10 39 39 H 1.08005 * 120.00408 * 0.25429 * 17 16 14 40 40 H 1.08003 * 120.00270 * 180.02562 * 20 18 17 41 41 H 1.07996 * 119.99655 * 180.02562 * 21 20 18 42 42 H 1.07999 * 119.98716 * 180.02562 * 22 21 20 43 43 H 1.09000 * 113.61501 * 156.33868 * 23 11 10 44 44 H 1.09000 * 113.69123 * 25.44044 * 23 11 10 45 45 H 1.09005 * 109.46786 * 45.00694 * 25 24 5 46 46 H 0.96698 * 113.99745 * 300.00055 * 26 25 24 47 47 H 1.48498 * 110.00118 * 180.02562 * 27 25 24 48 48 H 1.48498 * 110.00150 * 301.32587 * 27 25 24 49 49 H 1.07998 * 119.94724 * 180.25140 * 28 24 5 50 50 H 1.08007 * 119.97054 * 179.72483 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 -0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5961 0.0000 7 6 6.1316 1.3606 -0.0011 8 6 7.6124 1.6402 -0.0016 9 8 8.0134 2.7847 -0.0015 10 7 8.4912 0.6182 -0.0021 11 6 9.9308 0.8901 -0.0031 12 1 10.1759 1.8716 -0.4088 13 6 10.6156 0.5880 1.3402 14 6 10.8314 -0.8425 0.8190 15 1 10.0073 -1.5196 1.0440 16 6 12.1769 -1.4191 1.1772 17 6 12.2895 -2.7558 1.5092 18 6 13.5251 -3.2851 1.8375 19 17 13.6674 -4.9644 2.2541 20 6 14.6468 -2.4757 1.8338 21 6 14.5329 -1.1387 1.5015 22 6 13.2986 -0.6108 1.1726 23 6 10.7726 -0.2505 -0.5991 24 6 3.2971 3.6821 0.0065 25 6 3.9775 5.0268 0.0130 26 8 4.5045 5.2878 1.3153 27 14 2.7436 6.3492 -0.4341 28 6 1.9172 3.6066 0.0017 29 6 1.2906 2.3753 0.0011 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8901 32 1 -0.3634 0.5139 -0.8899 33 1 4.0196 0.3792 -0.0017 34 1 5.8698 0.7889 -0.8915 35 1 5.8700 0.7875 0.8884 36 1 8.1705 -0.2972 -0.0019 37 1 9.9426 0.6442 2.1958 38 1 11.5421 1.1418 1.4922 39 1 11.4140 -3.3882 1.5080 40 1 15.6115 -2.8884 2.0896 41 1 15.4087 -0.5067 1.4982 42 1 13.2101 0.4337 0.9127 43 1 11.7420 0.0739 -0.9773 44 1 10.2275 -0.8721 -1.3095 45 1 4.7894 5.0267 -0.7144 46 1 3.8365 5.3027 2.0142 47 1 3.4023 7.6801 -0.4318 48 1 2.1646 6.0718 -1.7731 49 1 1.3277 4.5115 0.0026 50 1 0.2120 2.3188 0.0019 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:10:14 Heat of formation + Delta-G solvation = -57.686209 kcal Electronic energy + Delta-G solvation = -34241.625167 eV Core-core repulsion = 29421.324917 eV Total energy + Delta-G solvation = -4820.300250 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.127 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -41.92504 -41.53454 -40.58995 -39.87412 -38.95613 -38.21982 -37.37960 -36.91338 -34.73524 -32.31694 -32.17277 -31.63433 -31.26459 -29.43163 -28.34432 -26.73435 -26.19379 -26.10790 -23.96343 -23.63663 -22.66173 -22.49124 -21.89133 -20.25611 -19.92152 -18.68251 -18.29666 -17.96461 -17.78948 -17.55043 -17.17854 -16.96349 -16.67321 -16.52121 -16.49074 -16.38841 -15.97672 -15.69909 -15.55954 -15.28069 -15.13203 -14.90943 -14.66333 -14.59586 -14.46165 -14.32530 -13.89569 -13.68617 -13.49540 -13.44577 -13.31865 -13.16237 -12.93899 -12.59505 -12.50000 -12.44267 -12.28295 -12.26428 -12.01368 -11.86628 -11.74349 -11.67374 -11.62662 -11.27757 -11.07871 -10.35375 -10.21396 -9.87170 -9.70096 -9.62276 -9.10094 -5.03505 0.14432 0.20813 0.26639 0.30207 1.13463 1.31908 1.36761 1.39824 1.64699 1.98750 2.24918 2.54030 2.57926 2.58295 3.41078 3.47385 3.60107 3.60667 3.66176 3.73752 3.83453 3.85828 3.92216 3.92908 4.02144 4.08461 4.09329 4.12276 4.16626 4.27405 4.34722 4.39735 4.42083 4.44005 4.46741 4.60029 4.61600 4.67078 4.74307 4.80066 4.80872 4.92439 4.96455 4.99264 5.02210 5.09729 5.23671 5.24499 5.27953 5.36193 5.43055 5.48374 5.60582 5.82776 6.11706 6.35106 6.41200 6.86572 7.06896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.254 4.254 5 C 0.173 3.827 6 O -0.305 6.305 7 C 0.035 3.965 8 C 0.517 3.483 9 O -0.567 6.567 10 N -0.692 5.692 11 C 0.115 3.885 12 H 0.084 0.916 13 C -0.142 4.142 14 C -0.065 4.065 15 H 0.115 0.885 16 C -0.061 4.061 17 C -0.116 4.116 18 C -0.048 4.048 19 Cl -0.081 7.081 20 C -0.127 4.127 21 C -0.108 4.108 22 C -0.117 4.117 23 C -0.122 4.122 24 C -0.203 4.203 25 C -0.068 4.068 26 O -0.557 6.557 27 Si 0.794 3.206 28 C -0.032 4.032 29 C -0.237 4.237 30 H 0.115 0.885 31 H 0.071 0.929 32 H 0.068 0.932 33 H 0.152 0.848 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.421 0.579 37 H 0.069 0.931 38 H 0.099 0.901 39 H 0.141 0.859 40 H 0.138 0.862 41 H 0.150 0.850 42 H 0.144 0.856 43 H 0.103 0.897 44 H 0.091 0.909 45 H 0.081 0.919 46 H 0.391 0.609 47 H -0.304 1.304 48 H -0.280 1.280 49 H 0.166 0.834 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.313 -4.180 0.404 7.582 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.273 4.273 5 C 0.127 3.873 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.445 6.445 10 N -0.346 5.346 11 C 0.009 3.991 12 H 0.102 0.898 13 C -0.181 4.181 14 C -0.083 4.083 15 H 0.133 0.867 16 C -0.061 4.061 17 C -0.135 4.135 18 C -0.074 4.074 19 Cl -0.052 7.052 20 C -0.146 4.146 21 C -0.126 4.126 22 C -0.135 4.135 23 C -0.160 4.160 24 C -0.204 4.204 25 C -0.176 4.176 26 O -0.365 6.365 27 Si 0.699 3.301 28 C -0.049 4.049 29 C -0.256 4.256 30 H 0.134 0.866 31 H 0.090 0.910 32 H 0.087 0.913 33 H 0.170 0.830 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.259 0.741 37 H 0.087 0.913 38 H 0.118 0.882 39 H 0.159 0.841 40 H 0.156 0.844 41 H 0.168 0.832 42 H 0.162 0.838 43 H 0.121 0.879 44 H 0.109 0.891 45 H 0.098 0.902 46 H 0.240 0.760 47 H -0.232 1.232 48 H -0.207 1.207 49 H 0.183 0.817 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -5.467 -2.921 -0.449 6.215 hybrid contribution 0.661 -1.195 -0.105 1.369 sum -4.806 -4.116 -0.554 6.352 Atomic orbital electron populations 1.23410 0.75947 1.05697 1.02782 1.86056 1.23814 1.26602 1.87943 1.18881 0.91612 0.85074 0.92734 1.20544 0.93522 0.97333 1.15875 1.18621 0.81679 0.93311 0.93693 1.86220 1.15646 1.31660 1.88188 1.22734 0.88430 0.86520 1.06645 1.20450 0.88473 0.85163 0.75604 1.90778 1.80684 1.23271 1.49769 1.45341 1.05253 1.09475 1.74558 1.21867 0.79287 1.00036 0.97881 0.89759 1.23571 1.01495 0.95782 0.97208 1.21620 0.94011 0.95938 0.96737 0.86714 1.19788 0.95812 0.92432 0.98089 1.21132 0.96352 0.95771 1.00198 1.21137 0.96111 0.85615 1.04568 1.98384 1.98349 1.16383 1.92084 1.21301 0.98084 0.94270 1.00910 1.21410 0.98897 0.94378 0.97891 1.21403 0.91965 1.01004 0.99143 1.23381 1.00830 0.95820 0.95968 1.19748 0.93833 0.94023 1.12817 1.25127 1.04357 0.99722 0.88426 1.86541 1.39282 1.93840 1.16829 0.94128 0.80353 0.73079 0.82585 1.20864 0.91519 0.98614 0.93882 1.21452 1.01797 0.91170 1.11186 0.86649 0.91039 0.91328 0.83028 0.86043 0.86020 0.74132 0.91265 0.88232 0.84102 0.84389 0.83216 0.83797 0.87872 0.89052 0.90169 0.76015 1.23235 1.20683 0.81670 0.82135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.11 10.49 -92.47 -0.97 -1.08 16 3 C 0.16 0.20 6.68 22.49 0.15 0.35 16 4 C -0.25 -0.54 8.97 22.46 0.20 -0.34 16 5 C 0.17 1.00 6.66 22.49 0.15 1.15 16 6 O -0.30 -2.70 8.99 -73.34 -0.66 -3.36 16 7 C 0.03 0.00 5.22 71.24 0.37 0.37 16 8 C 0.52 2.36 7.91 87.66 0.69 3.05 16 9 O -0.57 -9.35 16.10 16.02 0.26 -9.09 16 10 N -0.69 2.33 5.26 -440.06 -2.32 0.01 16 11 C 0.11 -0.24 4.32 45.52 0.20 -0.05 16 12 H 0.08 0.28 7.46 -2.39 -0.02 0.26 16 13 C -0.14 0.47 7.25 31.12 0.23 0.69 16 14 C -0.06 0.39 3.86 -11.01 -0.04 0.34 16 15 H 0.11 -1.00 8.09 -2.39 -0.02 -1.02 16 16 C -0.06 0.15 5.29 -19.87 -0.11 0.04 16 17 C -0.12 0.03 9.49 22.29 0.21 0.24 16 18 C -0.05 -0.10 6.32 22.32 0.14 0.04 16 19 Cl -0.08 -0.27 28.96 -2.72 -0.08 -0.35 16 20 C -0.13 -0.08 9.83 22.29 0.22 0.14 16 21 C -0.11 0.19 10.05 22.27 0.22 0.42 16 22 C -0.12 0.30 8.61 22.27 0.19 0.50 16 23 C -0.12 0.79 7.29 31.12 0.23 1.01 16 24 C -0.20 -0.85 5.28 -19.75 -0.10 -0.95 16 25 C -0.07 -0.42 2.37 71.24 0.17 -0.25 16 26 O -0.56 -4.30 12.88 -148.98 -1.92 -6.22 16 27 Si 0.79 0.49 29.91 68.60 2.05 2.54 16 28 C -0.03 0.05 8.65 22.24 0.19 0.24 16 29 C -0.24 0.48 9.04 22.38 0.20 0.68 16 30 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 31 H 0.07 -0.66 7.66 -2.38 -0.02 -0.68 16 32 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 33 H 0.15 -0.34 6.30 -2.91 -0.02 -0.35 16 34 H 0.12 -0.73 7.66 -2.39 -0.02 -0.75 16 35 H 0.12 -0.70 7.66 -2.39 -0.02 -0.72 16 36 H 0.42 -4.51 8.70 -92.71 -0.81 -5.32 16 37 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 38 H 0.10 -0.36 6.31 -2.38 -0.02 -0.38 16 39 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 40 H 0.14 -0.17 8.06 -2.91 -0.02 -0.20 16 41 H 0.15 -0.87 8.06 -2.91 -0.02 -0.89 16 42 H 0.14 -0.84 6.66 -2.91 -0.02 -0.86 16 43 H 0.10 -0.66 7.72 -2.39 -0.02 -0.68 16 44 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 45 H 0.08 0.96 7.82 -2.38 -0.02 0.94 16 46 H 0.39 -0.90 8.70 -74.06 -0.64 -1.54 16 47 H -0.30 -2.66 7.11 99.48 0.71 -1.96 16 48 H -0.28 -1.21 7.11 99.48 0.71 -0.50 16 49 H 0.17 -1.32 5.11 -2.91 -0.01 -1.34 16 50 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 Total: 0.00 -29.78 428.12 0.59 -29.18 By element: Atomic # 1 Polarization: -19.92 SS G_CDS: -0.40 Total: -20.32 kcal Atomic # 6 Polarization: 4.06 SS G_CDS: 4.63 Total: 8.68 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -2.32 Total: 0.01 kcal Atomic # 8 Polarization: -16.46 SS G_CDS: -3.29 Total: -19.75 kcal Atomic # 14 Polarization: 0.49 SS G_CDS: 2.05 Total: 2.54 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -0.08 Total: -0.35 kcal Total: -29.78 0.59 -29.18 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.502 kcal (2) G-P(sol) polarization free energy of solvation -29.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.686 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds