Wall clock time and date at job start Mon Mar 8 2021 02:11:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36766 * 125.79776 * 2 1 4 4 C 1.47261 * 126.94408 * 359.94354 * 3 2 1 5 5 O 1.21624 * 120.00217 * 359.97438 * 4 3 2 6 6 N 1.34779 * 120.00063 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99997 * 179.97438 * 6 4 3 8 8 H 1.08997 * 112.90794 * 336.24890 * 7 6 4 9 9 C 1.53779 * 113.61505 * 107.49935 * 7 6 4 10 10 C 1.53778 * 87.08040 * 89.11572 * 9 7 6 11 11 H 1.08998 * 113.69435 * 270.86929 * 10 9 7 12 12 C 1.50701 * 113.61576 * 139.97899 * 10 9 7 13 13 C 1.38199 * 119.99483 * 322.82610 * 12 10 9 14 14 C 1.38369 * 119.98895 * 180.27487 * 13 12 10 15 15 Cl 1.73599 * 120.01656 * 179.70030 * 14 13 12 16 16 C 1.38335 * 119.97082 * 359.42034 * 14 13 12 17 17 C 1.38236 * 119.98682 * 0.28233 * 16 14 13 18 18 C 1.38224 * 120.01528 * 359.97438 * 17 16 14 19 19 C 1.53778 * 113.61247 * 204.99752 * 7 6 4 20 20 C 1.46684 * 106.11498 * 180.20264 * 3 2 1 21 21 C 1.34482 * 106.33316 * 359.63045 * 20 3 2 22 22 C 1.50703 * 125.57727 * 180.16502 * 21 20 3 23 23 O 1.42898 * 109.47048 * 65.26598 * 22 21 20 24 24 Si 1.86290 * 109.47419 * 185.27017 * 22 21 20 25 25 N 1.34659 * 125.80435 * 179.97438 * 2 1 3 26 26 H 1.08995 * 109.47291 * 90.00750 * 1 2 3 27 27 H 1.09001 * 109.46536 * 209.99880 * 1 2 3 28 28 H 1.08995 * 109.47530 * 329.99805 * 1 2 3 29 29 H 0.96994 * 120.00129 * 359.97438 * 6 4 3 30 30 H 1.08999 * 113.61756 * 334.56844 * 9 7 6 31 31 H 1.08998 * 113.61111 * 203.66488 * 9 7 6 32 32 H 1.08000 * 120.00335 * 359.97438 * 13 12 10 33 33 H 1.08003 * 120.00553 * 180.29782 * 16 14 13 34 34 H 1.08003 * 119.99208 * 179.97438 * 17 16 14 35 35 H 1.07991 * 119.98575 * 180.02562 * 18 17 16 36 36 H 1.09003 * 113.61320 * 156.33419 * 19 7 6 37 37 H 1.08997 * 113.69224 * 25.44248 * 19 7 6 38 38 H 1.08008 * 126.83510 * 179.74695 * 20 3 2 39 39 H 1.09008 * 109.46437 * 305.27053 * 22 21 20 40 40 H 0.96698 * 114.00389 * 60.00306 * 23 22 21 41 41 H 1.48498 * 110.00303 * 58.67776 * 24 22 21 42 42 H 1.48508 * 109.99969 * 179.97438 * 24 22 21 43 43 H 0.96996 * 124.85107 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5156 -0.0012 5 8 0.6838 2.7839 -0.0027 6 7 2.7848 3.5055 -0.0015 7 6 2.3502 4.9045 -0.0032 8 1 1.3470 5.0366 -0.4085 9 6 2.5711 5.6199 1.3400 10 6 3.9679 5.9976 0.8195 11 1 4.7346 5.2565 1.0452 12 6 4.3866 7.4003 1.1774 13 6 3.4542 8.4204 1.1793 14 6 3.8399 9.7094 1.5025 15 17 2.6708 10.9927 1.4976 16 6 5.1564 9.9739 1.8350 17 6 6.0869 8.9516 1.8387 18 6 5.7021 7.6652 1.5107 19 6 3.3874 5.8710 -0.5989 20 6 3.6881 0.6152 -0.0050 21 6 3.6096 -0.7273 0.0008 22 6 4.7820 -1.6741 0.0022 23 8 5.5094 -1.5298 1.2237 24 14 4.1659 -3.4256 -0.1505 25 7 2.2948 -1.0921 0.0005 26 1 -0.3633 -0.0001 -1.0276 27 1 -0.3632 -0.8900 0.5138 28 1 -0.3634 0.8899 0.5138 29 1 3.7309 3.2916 -0.0006 30 1 2.5918 4.9452 2.1958 31 1 1.9149 6.4770 1.4912 32 1 2.4256 8.2124 0.9240 33 1 5.4570 10.9789 2.0920 34 1 7.1148 9.1582 2.0979 35 1 6.4293 6.8669 1.5141 36 1 2.9544 6.7969 -0.9777 37 1 4.0676 5.4004 -1.3087 38 1 4.5890 1.2111 -0.0102 39 1 5.4356 -1.4442 -0.8393 40 1 4.9888 -1.7192 2.0163 41 1 3.3808 -3.5807 -1.4013 42 1 5.3127 -4.3692 -0.1509 43 1 1.9735 -2.0073 0.0013 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705206_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:11:09 Heat of formation + Delta-G solvation = 22.309565 kcal Electronic energy + Delta-G solvation = -26884.747165 eV Core-core repulsion = 22923.618025 eV Total energy + Delta-G solvation = -3961.129140 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.49109 -41.44154 -40.08990 -38.75092 -37.70226 -37.37654 -34.57102 -32.78783 -32.36072 -31.69600 -31.42265 -28.91119 -26.69897 -26.58339 -25.40822 -23.91827 -23.38823 -22.47538 -21.54130 -20.75306 -20.02981 -18.68030 -18.31250 -17.67515 -17.00354 -16.88210 -16.57850 -16.48243 -16.31028 -15.87617 -15.47562 -15.35431 -14.95880 -14.90850 -14.63420 -14.60708 -14.46174 -14.25460 -14.07128 -13.82035 -13.53038 -13.46078 -13.35687 -12.94495 -12.66996 -12.56918 -12.54197 -12.43620 -12.23871 -12.11529 -11.80231 -11.62852 -11.18699 -10.97117 -10.46927 -10.12971 -9.85953 -9.78574 -9.60585 -9.15602 -5.14920 0.17889 0.27850 0.69881 1.15100 1.15546 1.25361 1.51760 1.85070 2.02780 2.38830 2.51239 2.61388 3.45039 3.46484 3.64615 3.70979 3.74004 3.86412 3.88825 3.97139 4.07384 4.10140 4.23988 4.25143 4.31144 4.44442 4.45905 4.51444 4.60530 4.72080 4.73234 4.76341 4.77596 4.87004 4.96432 5.00543 5.02926 5.05413 5.15682 5.26412 5.29303 5.39683 5.55101 5.67351 5.70620 5.85834 5.86835 6.43473 6.65700 6.72880 7.35316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.119 3.881 3 C -0.265 4.265 4 C 0.589 3.411 5 O -0.585 6.585 6 N -0.698 5.698 7 C 0.118 3.882 8 H 0.085 0.915 9 C -0.143 4.143 10 C -0.063 4.063 11 H 0.117 0.883 12 C -0.062 4.062 13 C -0.118 4.118 14 C -0.048 4.048 15 Cl -0.082 7.082 16 C -0.127 4.127 17 C -0.107 4.107 18 C -0.114 4.114 19 C -0.126 4.126 20 C -0.137 4.137 21 C -0.024 4.024 22 C -0.036 4.036 23 O -0.548 6.548 24 Si 0.764 3.236 25 N -0.533 5.533 26 H 0.080 0.920 27 H 0.094 0.906 28 H 0.082 0.918 29 H 0.412 0.588 30 H 0.068 0.932 31 H 0.093 0.907 32 H 0.136 0.864 33 H 0.139 0.861 34 H 0.153 0.847 35 H 0.150 0.850 36 H 0.097 0.903 37 H 0.088 0.912 38 H 0.158 0.842 39 H 0.124 0.876 40 H 0.396 0.604 41 H -0.279 1.279 42 H -0.291 1.291 43 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.146 -5.199 1.458 6.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.001 4.001 3 C -0.275 4.275 4 C 0.380 3.620 5 O -0.467 6.467 6 N -0.349 5.349 7 C 0.013 3.987 8 H 0.103 0.897 9 C -0.182 4.182 10 C -0.081 4.081 11 H 0.135 0.865 12 C -0.062 4.062 13 C -0.136 4.136 14 C -0.075 4.075 15 Cl -0.053 7.053 16 C -0.146 4.146 17 C -0.125 4.125 18 C -0.132 4.132 19 C -0.164 4.164 20 C -0.161 4.161 21 C -0.132 4.132 22 C -0.148 4.148 23 O -0.355 6.355 24 Si 0.668 3.332 25 N -0.134 5.134 26 H 0.099 0.901 27 H 0.112 0.888 28 H 0.100 0.900 29 H 0.248 0.752 30 H 0.087 0.913 31 H 0.111 0.889 32 H 0.153 0.847 33 H 0.157 0.843 34 H 0.170 0.830 35 H 0.167 0.833 36 H 0.116 0.884 37 H 0.106 0.894 38 H 0.175 0.825 39 H 0.141 0.859 40 H 0.246 0.754 41 H -0.206 1.206 42 H -0.218 1.218 43 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges 2.704 -5.615 0.584 6.260 hybrid contribution 0.309 0.501 -0.321 0.670 sum 3.012 -5.115 0.263 5.942 Atomic orbital electron populations 1.20618 0.86110 1.04810 1.03910 1.20556 0.94283 0.85632 0.99621 1.20161 0.94215 0.91603 1.21532 1.17621 0.84977 0.84958 0.74456 1.90730 1.18151 1.84947 1.52916 1.45328 1.10009 1.04572 1.74984 1.21781 0.99177 0.80410 0.97376 0.89728 1.23546 0.96569 1.00536 0.97513 1.21598 0.97240 0.92710 0.96516 0.86495 1.19802 0.93268 0.94926 0.98206 1.21029 1.00972 0.90600 1.01028 1.21112 0.91159 0.89797 1.05388 1.98382 1.59031 1.50734 1.97169 1.21310 0.91255 1.01336 1.00674 1.21441 1.00410 0.92240 0.98449 1.21500 0.95868 0.97704 0.98146 1.23369 0.97513 0.99425 0.96096 1.21968 0.95360 0.93236 1.05583 1.20685 0.84740 0.95647 1.12159 1.24567 0.92186 1.07184 0.90829 1.86517 1.40475 1.92898 1.15655 0.94357 0.81647 0.72595 0.84581 1.41673 1.05169 1.08759 1.57793 0.90094 0.88769 0.89975 0.75154 0.91283 0.88903 0.84652 0.84330 0.82969 0.83262 0.88445 0.89362 0.82479 0.85907 0.75376 1.20592 1.21785 0.73168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.05 9.88 71.24 0.70 0.75 16 2 C 0.12 0.13 7.17 41.78 0.30 0.43 16 3 C -0.27 -1.01 6.29 -19.04 -0.12 -1.13 16 4 C 0.59 4.20 7.81 86.61 0.68 4.87 16 5 O -0.59 -8.19 14.41 -4.11 -0.06 -8.25 16 6 N -0.70 -0.69 5.26 -443.45 -2.33 -3.02 16 7 C 0.12 0.09 4.32 45.52 0.20 0.29 16 8 H 0.08 0.46 7.46 -2.39 -0.02 0.44 16 9 C -0.14 0.08 7.25 31.12 0.23 0.31 16 10 C -0.06 0.23 3.86 -11.02 -0.04 0.19 16 11 H 0.12 -0.78 8.09 -2.39 -0.02 -0.80 16 12 C -0.06 0.06 5.29 -19.87 -0.11 -0.05 16 13 C -0.12 -0.19 8.41 22.29 0.19 -0.01 16 14 C -0.05 -0.17 6.32 22.32 0.14 -0.02 16 15 Cl -0.08 -0.39 28.96 -2.72 -0.08 -0.47 16 16 C -0.13 -0.16 9.83 22.29 0.22 0.06 16 17 C -0.11 0.18 10.05 22.27 0.22 0.40 16 18 C -0.11 0.27 9.71 22.27 0.22 0.48 16 19 C -0.13 0.42 7.29 31.12 0.23 0.65 16 20 C -0.14 0.03 10.45 23.62 0.25 0.28 16 21 C -0.02 0.07 6.09 40.98 0.25 0.32 16 22 C -0.04 0.18 2.98 71.24 0.21 0.39 16 23 O -0.55 2.17 12.88 -148.98 -1.92 0.25 16 24 Si 0.76 -5.12 30.96 68.60 2.12 -3.00 16 25 N -0.53 2.15 5.41 -171.07 -0.93 1.22 16 26 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 27 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 28 H 0.08 0.39 6.47 -2.39 -0.02 0.38 16 29 H 0.41 -1.63 7.82 -92.71 -0.73 -2.35 16 30 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 31 H 0.09 -0.02 6.29 -2.39 -0.02 -0.04 16 32 H 0.14 0.07 6.64 -2.91 -0.02 0.05 16 33 H 0.14 -0.12 8.06 -2.91 -0.02 -0.14 16 34 H 0.15 -0.94 8.06 -2.91 -0.02 -0.97 16 35 H 0.15 -1.03 8.05 -2.91 -0.02 -1.06 16 36 H 0.10 -0.28 7.73 -2.39 -0.02 -0.29 16 37 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 38 H 0.16 -0.56 7.70 -2.91 -0.02 -0.58 16 39 H 0.12 -0.53 7.96 -2.38 -0.02 -0.55 16 40 H 0.40 -4.53 8.70 -74.06 -0.64 -5.17 16 41 H -0.28 0.55 7.11 99.48 0.71 1.26 16 42 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 43 H 0.43 -4.18 6.72 -92.71 -0.62 -4.81 16 Total: 0.00 -20.15 373.42 -0.31 -20.45 By element: Atomic # 1 Polarization: -14.52 SS G_CDS: -0.87 Total: -15.39 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: 3.76 Total: 8.21 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -3.26 Total: -1.80 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.98 Total: -8.00 kcal Atomic # 14 Polarization: -5.12 SS G_CDS: 2.12 Total: -3.00 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -0.08 Total: -0.47 kcal Total: -20.15 -0.31 -20.45 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705206_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.762 kcal (2) G-P(sol) polarization free energy of solvation -20.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.452 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds