Wall clock time and date at job start Mon Mar 8 2021 02:11:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86303 * 109.47098 * 2 1 4 4 C 1.50698 * 109.47036 * 240.00031 * 2 1 3 5 5 C 1.36453 * 120.29612 * 239.97592 * 4 2 1 6 6 C 1.40084 * 119.25811 * 180.02562 * 5 4 2 7 7 C 1.40854 * 132.86882 * 179.97438 * 6 5 4 8 8 C 1.46571 * 126.57593 * 0.02562 * 7 6 5 9 9 O 1.21727 * 119.99939 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99748 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99801 * 179.97438 * 10 8 7 12 12 H 1.09005 * 112.85028 * 25.33301 * 11 10 8 13 13 C 1.53776 * 113.61375 * 156.52648 * 11 10 8 14 14 C 1.53782 * 87.08137 * 89.11996 * 13 11 10 15 15 H 1.08999 * 113.61281 * 270.88751 * 14 13 11 16 16 C 1.50696 * 113.61849 * 140.06293 * 14 13 11 17 17 C 1.38232 * 119.98450 * 120.00181 * 16 14 13 18 18 C 1.38263 * 120.04827 * 179.97438 * 17 16 14 19 19 C 1.38174 * 120.02811 * 0.02562 * 18 17 16 20 20 C 1.38482 * 119.97532 * 359.97438 * 19 18 17 21 21 F 1.35102 * 120.02950 * 180.02562 * 20 19 18 22 22 C 1.38218 * 119.98901 * 299.72862 * 16 14 13 23 23 C 1.53777 * 113.61512 * 254.13670 * 11 10 8 24 24 C 1.40554 * 106.84214 * 180.02562 * 7 6 5 25 25 N 1.30742 * 108.74345 * 0.23316 * 24 7 6 26 26 N 1.36583 * 120.23124 * 0.02562 * 6 5 4 27 27 C 1.36247 * 120.07598 * 359.97438 * 26 6 5 28 28 C 1.35188 * 120.70844 * 0.02562 * 27 26 6 29 29 H 0.96697 * 114.00182 * 59.99686 * 1 2 3 30 30 H 1.09001 * 109.47243 * 119.99893 * 2 1 3 31 31 H 1.48500 * 109.99696 * 298.68080 * 3 2 1 32 32 H 1.48500 * 110.00108 * 60.00054 * 3 2 1 33 33 H 1.08004 * 120.36785 * 0.04322 * 5 4 2 34 34 H 0.96998 * 119.99607 * 359.97438 * 10 8 7 35 35 H 1.09004 * 113.61929 * 203.66539 * 13 11 10 36 36 H 1.08997 * 113.61555 * 334.48831 * 13 11 10 37 37 H 1.08001 * 119.97360 * 359.96029 * 17 16 14 38 38 H 1.08003 * 119.98876 * 179.97438 * 18 17 16 39 39 H 1.08004 * 120.01546 * 179.97438 * 19 18 17 40 40 H 1.07998 * 120.00958 * 0.02562 * 22 16 14 41 41 H 1.09003 * 113.61464 * 25.43772 * 23 11 10 42 42 H 1.09005 * 113.61404 * 156.33749 * 23 11 10 43 43 H 1.08002 * 125.62408 * 179.97438 * 24 7 6 44 44 H 1.07992 * 119.64607 * 179.97438 * 27 26 6 45 45 H 1.07993 * 119.84054 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7165 -1.8201 -1.1123 6 6 3.1718 -2.4631 -2.2706 7 6 3.9766 -3.5995 -2.4822 8 6 4.5776 -4.4488 -1.4498 9 8 4.3981 -4.1953 -0.2728 10 7 5.3288 -5.5104 -1.8036 11 6 5.9299 -6.3589 -0.7717 12 1 5.3835 -6.3303 0.1710 13 6 6.2502 -7.7832 -1.2550 14 6 7.6240 -7.2433 -1.6865 15 1 7.6399 -6.8536 -2.7043 16 6 8.7609 -8.1915 -1.4049 17 6 9.5428 -8.6604 -2.4439 18 6 10.5865 -9.5300 -2.1870 19 6 10.8489 -9.9317 -0.8913 20 6 10.0663 -9.4625 0.1504 21 9 10.3223 -9.8541 1.4179 22 6 9.0250 -8.5874 -0.1073 23 6 7.4455 -6.1542 -0.6117 24 6 4.0929 -3.7628 -3.8734 25 7 3.4237 -2.8086 -4.4658 26 7 2.8323 -1.9819 -3.5029 27 6 2.0477 -0.8732 -3.6106 28 6 1.5969 -0.2366 -2.5064 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4585 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 2.9837 -2.1985 -0.1367 34 1 5.4714 -5.7124 -2.7416 35 1 6.3024 -8.5161 -0.4499 36 1 5.6279 -8.1122 -2.0872 37 1 9.3380 -8.3475 -3.4571 38 1 11.1965 -9.8962 -2.9996 39 1 11.6641 -10.6113 -0.6909 40 1 8.4165 -8.2177 0.7048 41 1 7.7885 -5.1683 -0.9257 42 1 7.8239 -6.4425 0.3691 43 1 4.6474 -4.5448 -4.3708 44 1 1.7838 -0.4985 -4.5884 45 1 0.9762 0.6413 -2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:11:30 Heat of formation + Delta-G solvation = 49.885436 kcal Electronic energy + Delta-G solvation = -31274.604792 eV Core-core repulsion = 26754.912916 eV Total energy + Delta-G solvation = -4519.691876 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.132 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -49.77592 -43.33226 -41.48925 -40.06288 -39.41896 -38.51879 -37.36352 -34.51007 -34.18703 -32.15479 -31.91643 -31.49829 -30.25182 -27.44724 -26.79100 -26.34537 -25.06398 -24.07362 -23.55580 -23.13004 -22.59801 -21.34605 -20.24797 -19.20931 -18.67654 -18.47984 -17.98677 -17.49237 -17.27579 -17.04772 -16.98028 -16.89106 -16.52528 -16.48488 -15.99309 -15.81440 -15.53985 -15.44934 -15.29252 -14.87863 -14.79496 -14.56907 -14.29341 -14.13253 -13.89066 -13.85159 -13.57688 -13.53682 -13.29127 -12.98639 -12.94280 -12.50863 -12.47972 -12.12857 -12.03006 -11.94202 -11.75374 -11.58155 -11.24901 -10.93688 -10.79125 -10.39520 -10.04518 -9.89055 -9.61131 -8.79884 -5.07378 -0.58890 -0.19060 0.16597 0.21391 0.95730 1.04163 1.09407 1.46190 1.78813 2.03237 2.18725 2.53754 2.57567 3.02088 3.11772 3.22728 3.24986 3.39323 3.42672 3.56825 3.59874 3.65107 3.75959 3.81497 3.88480 3.94893 4.03741 4.08839 4.12368 4.19616 4.22116 4.31001 4.37717 4.47778 4.58968 4.66376 4.67531 4.79518 4.84451 4.87587 4.97019 5.04419 5.07392 5.08371 5.13183 5.16433 5.23364 5.33375 5.49670 5.60113 5.64325 5.91431 6.19766 6.27634 6.58600 7.37686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.076 4.076 3 Si 0.696 3.304 4 C -0.065 4.065 5 C -0.090 4.090 6 C 0.170 3.830 7 C -0.316 4.316 8 C 0.605 3.395 9 O -0.546 6.546 10 N -0.712 5.712 11 C 0.125 3.875 12 H 0.107 0.893 13 C -0.136 4.136 14 C -0.075 4.075 15 H 0.102 0.898 16 C -0.042 4.042 17 C -0.127 4.127 18 C -0.088 4.088 19 C -0.159 4.159 20 C 0.102 3.898 21 F -0.139 7.139 22 C -0.152 4.152 23 C -0.145 4.145 24 C 0.120 3.880 25 N -0.313 5.313 26 N -0.267 5.267 27 C 0.123 3.877 28 C -0.162 4.162 29 H 0.375 0.625 30 H 0.127 0.873 31 H -0.253 1.253 32 H -0.247 1.247 33 H 0.166 0.834 34 H 0.398 0.602 35 H 0.099 0.901 36 H 0.079 0.921 37 H 0.129 0.871 38 H 0.133 0.867 39 H 0.135 0.865 40 H 0.137 0.863 41 H 0.077 0.923 42 H 0.095 0.905 43 H 0.198 0.802 44 H 0.177 0.823 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.029 1.773 -4.442 4.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.184 4.184 3 Si 0.594 3.406 4 C -0.071 4.071 5 C -0.110 4.110 6 C 0.049 3.951 7 C -0.330 4.330 8 C 0.394 3.606 9 O -0.424 6.424 10 N -0.363 5.363 11 C 0.019 3.981 12 H 0.125 0.875 13 C -0.174 4.174 14 C -0.094 4.094 15 H 0.120 0.880 16 C -0.042 4.042 17 C -0.145 4.145 18 C -0.106 4.106 19 C -0.178 4.178 20 C 0.082 3.918 21 F -0.118 7.118 22 C -0.171 4.171 23 C -0.183 4.183 24 C -0.061 4.061 25 N -0.133 5.133 26 N -0.031 5.031 27 C -0.003 4.003 28 C -0.183 4.183 29 H 0.223 0.777 30 H 0.145 0.855 31 H -0.177 1.177 32 H -0.171 1.171 33 H 0.183 0.817 34 H 0.233 0.767 35 H 0.117 0.883 36 H 0.097 0.903 37 H 0.147 0.853 38 H 0.151 0.849 39 H 0.153 0.847 40 H 0.154 0.846 41 H 0.096 0.904 42 H 0.113 0.887 43 H 0.215 0.785 44 H 0.194 0.806 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.482 2.880 -4.229 5.139 hybrid contribution -0.524 -0.860 -0.261 1.040 sum -0.042 2.019 -4.489 4.923 Atomic orbital electron populations 1.86709 1.16854 1.80014 1.49155 1.25082 0.84319 1.11354 0.97691 0.94406 0.91667 0.73231 0.81290 1.20420 0.96113 0.95035 0.95545 1.20703 0.97965 0.94112 0.98184 1.19290 0.95504 0.94090 0.86177 1.19588 1.16213 1.03722 0.93512 1.16808 0.77105 0.79392 0.87315 1.90793 1.61533 1.71561 1.18519 1.45355 1.52512 1.28929 1.09495 1.21782 0.93736 0.89807 0.92761 0.87545 1.23429 0.95343 0.96272 1.02330 1.21694 0.92274 0.95123 1.00261 0.88002 1.19535 0.95984 0.96533 0.92151 1.21148 0.95752 0.98401 0.99238 1.21046 0.97067 0.96436 0.96005 1.21209 1.01216 1.02848 0.92516 1.17718 0.97046 0.97791 0.79203 1.91525 1.93579 1.89494 1.37177 1.21005 0.98511 0.99532 0.98057 1.23632 0.96174 0.99131 0.99375 1.24063 0.94370 0.95676 0.91976 1.77643 1.18457 1.06447 1.10753 1.46077 1.32056 1.19075 1.05855 1.21517 0.91895 0.85118 1.01753 1.20710 1.04324 1.02584 0.90707 0.77714 0.85548 1.17681 1.17109 0.81699 0.76718 0.88294 0.90257 0.85326 0.84897 0.84743 0.84569 0.90412 0.88662 0.78505 0.80558 0.82589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.10 12.87 -35.23 -0.45 -0.36 16 2 C -0.08 0.12 2.84 36.00 0.10 0.22 16 3 Si 0.70 -1.66 31.97 -169.99 -5.43 -7.10 16 4 C -0.07 0.06 4.53 -104.55 -0.47 -0.41 16 5 C -0.09 -0.09 9.35 -39.53 -0.37 -0.46 16 6 C 0.17 0.38 6.76 -84.07 -0.57 -0.19 16 7 C -0.32 -0.56 6.17 -104.68 -0.65 -1.21 16 8 C 0.60 1.38 7.78 -12.90 -0.10 1.28 16 9 O -0.55 -3.01 15.32 5.17 0.08 -2.93 16 10 N -0.71 0.70 5.25 -54.35 -0.29 0.42 16 11 C 0.12 -0.12 4.29 -67.12 -0.29 -0.41 16 12 H 0.11 0.09 7.50 -51.93 -0.39 -0.30 16 13 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 14 C -0.08 0.18 3.87 -90.82 -0.35 -0.17 16 15 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 16 C -0.04 0.03 5.29 -104.63 -0.55 -0.52 16 17 C -0.13 0.14 9.71 -39.57 -0.38 -0.25 16 18 C -0.09 0.07 10.04 -39.60 -0.40 -0.33 16 19 C -0.16 -0.08 10.03 -39.51 -0.40 -0.47 16 20 C 0.10 0.17 7.30 -39.42 -0.29 -0.12 16 21 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 22 C -0.15 -0.05 8.61 -39.51 -0.34 -0.39 16 23 C -0.14 0.20 7.27 -25.78 -0.19 0.01 16 24 C 0.12 0.00 11.44 -17.14 -0.20 -0.19 16 25 N -0.31 -0.65 12.57 30.75 0.39 -0.26 16 26 N -0.27 -0.41 3.86 -10.55 -0.04 -0.46 16 27 C 0.12 -0.16 11.17 -16.68 -0.19 -0.34 16 28 C -0.16 0.38 8.38 -39.95 -0.33 0.05 16 29 H 0.38 -1.43 8.08 45.56 0.37 -1.06 16 30 H 0.13 -0.24 7.71 -51.93 -0.40 -0.64 16 31 H -0.25 0.34 7.05 56.52 0.40 0.74 16 32 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 33 H 0.17 0.22 7.01 -52.48 -0.37 -0.15 16 34 H 0.40 -1.49 7.62 -40.82 -0.31 -1.80 16 35 H 0.10 -0.23 7.73 -51.93 -0.40 -0.63 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.13 -0.39 8.05 -52.49 -0.42 -0.81 16 38 H 0.13 -0.37 8.06 -52.48 -0.42 -0.79 16 39 H 0.13 -0.10 8.06 -52.48 -0.42 -0.53 16 40 H 0.14 -0.10 6.65 -52.49 -0.35 -0.45 16 41 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.10 -0.13 6.31 -51.93 -0.33 -0.46 16 43 H 0.20 -0.85 7.46 -52.49 -0.39 -1.24 16 44 H 0.18 -0.71 8.06 -52.49 -0.42 -1.13 16 45 H 0.16 -0.79 7.26 -52.49 -0.38 -1.18 16 LS Contribution 385.34 15.07 5.81 5.81 Total: 0.00 -10.05 385.34 -11.16 -21.21 By element: Atomic # 1 Polarization: -7.06 SS G_CDS: -5.11 Total: -12.17 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -6.15 Total: -3.76 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: 0.06 Total: -0.30 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.37 Total: -3.28 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.43 Total: -7.10 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.05 -11.16 -21.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.096 kcal (2) G-P(sol) polarization free energy of solvation -10.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.044 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.211 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds