Wall clock time and date at job start Mon Mar 8 2021 02:11:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35449 * 125.56636 * 2 1 4 4 C 1.50708 * 126.06575 * 359.97438 * 3 2 1 5 5 O 1.42898 * 109.47057 * 231.27134 * 4 3 2 6 6 Si 1.86296 * 109.46973 * 111.27347 * 4 3 2 7 7 C 1.39831 * 107.86899 * 180.12040 * 3 2 1 8 8 C 1.50697 * 126.46324 * 179.89403 * 7 3 2 9 9 C 1.37870 * 107.08351 * 359.62618 * 7 3 2 10 10 C 1.46685 * 126.23605 * 180.24517 * 9 7 3 11 11 O 1.21695 * 119.99692 * 0.02562 * 10 9 7 12 12 N 1.34780 * 119.99992 * 179.97438 * 10 9 7 13 13 C 1.46501 * 119.99711 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84670 * 25.34282 * 13 12 10 15 15 C 1.53775 * 113.61027 * 156.53154 * 13 12 10 16 16 C 1.53779 * 87.08210 * 89.11997 * 15 13 12 17 17 H 1.08998 * 113.61906 * 270.80251 * 16 15 13 18 18 C 1.50696 * 113.61846 * 139.97934 * 16 15 13 19 19 C 1.38180 * 119.98703 * 299.72991 * 18 16 15 20 20 C 1.38477 * 119.97830 * 179.72765 * 19 18 16 21 21 F 1.35098 * 120.02976 * 180.25327 * 20 19 18 22 22 C 1.38441 * 119.94373 * 0.54464 * 20 19 18 23 23 C 1.38217 * 119.97482 * 359.72789 * 22 20 19 24 24 C 1.38220 * 120.02881 * 0.02562 * 23 22 20 25 25 C 1.53772 * 113.61782 * 254.14173 * 13 12 10 26 26 N 1.35540 * 125.56126 * 179.70106 * 2 1 3 27 27 H 1.09004 * 109.46750 * 275.55409 * 1 2 3 28 28 H 1.08994 * 109.47302 * 35.55099 * 1 2 3 29 29 H 1.09002 * 109.47505 * 155.55569 * 1 2 3 30 30 H 1.08997 * 109.46954 * 351.26937 * 4 3 2 31 31 H 0.96699 * 113.99756 * 179.97438 * 5 4 3 32 32 H 1.48510 * 110.00122 * 305.78568 * 6 4 3 33 33 H 1.48502 * 110.00513 * 67.10811 * 6 4 3 34 34 H 1.08999 * 109.47328 * 269.71137 * 8 7 3 35 35 H 1.09011 * 109.46878 * 29.70900 * 8 7 3 36 36 H 1.08997 * 109.47415 * 149.71003 * 8 7 3 37 37 H 0.96998 * 120.00151 * 0.02562 * 12 10 9 38 38 H 1.09001 * 113.61923 * 203.66589 * 15 13 12 39 39 H 1.09002 * 113.62138 * 334.49035 * 15 13 12 40 40 H 1.08004 * 120.00966 * 359.97438 * 19 18 16 41 41 H 1.08002 * 120.01239 * 179.74807 * 22 20 19 42 42 H 1.08004 * 119.98871 * 179.97438 * 23 22 20 43 43 H 1.07994 * 119.97614 * 179.97438 * 24 23 22 44 44 H 1.09000 * 113.61664 * 25.43172 * 25 13 12 45 45 H 1.09005 * 113.61821 * 156.33600 * 25 13 12 46 46 H 0.96995 * 125.68122 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5321 -0.0005 5 8 2.4701 3.2495 -1.0515 6 14 2.2284 3.3226 1.6361 7 6 3.6270 0.6767 -0.0028 8 6 4.8486 1.5591 -0.0060 9 6 3.6122 -0.7019 0.0041 10 6 4.7860 -1.5816 0.0093 11 8 5.9049 -1.1030 0.0080 12 7 4.6253 -2.9197 0.0164 13 6 5.7976 -3.7982 0.0210 14 1 6.6808 -3.3232 0.4483 15 6 5.5155 -5.1988 0.5896 16 6 5.1405 -5.6184 -0.8415 17 1 4.0883 -5.4637 -1.0804 18 6 5.6292 -6.9941 -1.2150 19 6 6.9823 -7.2739 -1.2005 20 6 7.4307 -8.5398 -1.5383 21 9 8.7530 -8.8159 -1.5195 22 6 6.5233 -9.5204 -1.9010 23 6 5.1707 -9.2366 -1.9202 24 6 4.7239 -7.9742 -1.5780 25 6 6.0596 -4.4830 -1.3307 26 7 2.2952 -1.1026 0.0058 27 1 -0.3633 0.0995 1.0229 28 1 -0.3633 0.8361 -0.5975 29 1 -0.3634 -0.9355 -0.4253 30 1 0.7415 2.5568 -0.1569 31 1 2.2114 4.1793 -1.1116 32 1 1.6745 2.5069 2.7466 33 1 3.7004 3.4506 1.7852 34 1 5.1439 1.7671 -1.0345 35 1 4.6216 2.4958 0.5033 36 1 5.6639 1.0528 0.5107 37 1 3.7334 -3.3011 0.0178 38 1 6.4034 -5.7013 0.9734 39 1 4.6787 -5.2264 1.2876 40 1 7.6896 -6.5067 -0.9220 41 1 6.8721 -10.5069 -2.1686 42 1 4.4626 -10.0013 -2.2036 43 1 3.6669 -7.7533 -1.5936 44 1 5.6608 -3.9332 -2.1833 45 1 7.0960 -4.7900 -1.4711 46 1 1.9833 -2.0210 0.0102 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:11:34 Heat of formation + Delta-G solvation = -21.146966 kcal Electronic energy + Delta-G solvation = -29376.041419 eV Core-core repulsion = 25147.836060 eV Total energy + Delta-G solvation = -4228.205359 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -49.83407 -42.70639 -41.53055 -40.01913 -38.65092 -37.60770 -34.84856 -33.73151 -33.09058 -31.85317 -31.56144 -29.26176 -27.73004 -26.91383 -26.69414 -25.87351 -23.87400 -22.98318 -22.50667 -20.80120 -20.50178 -19.85685 -19.40067 -18.55534 -18.18937 -17.35805 -17.12585 -17.06411 -16.86366 -16.55383 -16.45836 -15.88391 -15.70543 -15.37820 -15.15340 -15.08166 -14.86983 -14.61261 -14.32375 -14.22869 -14.03223 -13.95461 -13.83053 -13.74346 -13.62783 -13.25596 -13.06541 -13.06113 -13.01410 -12.59055 -12.56419 -12.37963 -12.14077 -11.86508 -11.59472 -11.36539 -10.90682 -10.53050 -10.24072 -9.97620 -9.68393 -9.47208 -9.02271 -4.87943 0.09254 0.14478 0.38147 1.21759 1.63799 1.80529 1.87859 1.97287 2.18792 2.34756 2.47785 3.13968 3.30944 3.46361 3.48888 3.51761 3.65867 3.70777 3.75650 3.79108 3.95947 3.96875 4.02987 4.10864 4.13966 4.28802 4.30282 4.37648 4.45975 4.48789 4.55591 4.58771 4.68343 4.70018 4.74446 4.79045 4.85099 4.94182 4.98470 5.00627 5.09184 5.11986 5.24933 5.32170 5.35285 5.42194 5.49216 5.68901 5.84424 5.90783 6.22588 6.40537 6.77901 7.12971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.079 3.921 3 C -0.171 4.171 4 C -0.025 4.025 5 O -0.544 6.544 6 Si 0.668 3.332 7 C -0.039 4.039 8 C -0.095 4.095 9 C -0.070 4.070 10 C 0.595 3.405 11 O -0.518 6.518 12 N -0.717 5.717 13 C 0.122 3.878 14 H 0.109 0.891 15 C -0.135 4.135 16 C -0.075 4.075 17 H 0.100 0.900 18 C -0.043 4.043 19 C -0.152 4.152 20 C 0.103 3.897 21 F -0.138 7.138 22 C -0.158 4.158 23 C -0.087 4.087 24 C -0.127 4.127 25 C -0.144 4.144 26 N -0.535 5.535 27 H 0.081 0.919 28 H 0.090 0.910 29 H 0.071 0.929 30 H 0.068 0.932 31 H 0.379 0.621 32 H -0.264 1.264 33 H -0.246 1.246 34 H 0.075 0.925 35 H 0.067 0.933 36 H 0.077 0.923 37 H 0.393 0.607 38 H 0.101 0.899 39 H 0.078 0.922 40 H 0.137 0.863 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.128 0.872 44 H 0.077 0.923 45 H 0.098 0.902 46 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.252 -0.138 0.496 8.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.040 4.040 3 C -0.177 4.177 4 C -0.135 4.135 5 O -0.349 6.349 6 Si 0.569 3.431 7 C -0.048 4.048 8 C -0.152 4.152 9 C -0.181 4.181 10 C 0.384 3.616 11 O -0.393 6.393 12 N -0.368 5.368 13 C 0.017 3.983 14 H 0.127 0.873 15 C -0.173 4.173 16 C -0.093 4.093 17 H 0.118 0.882 18 C -0.043 4.043 19 C -0.171 4.171 20 C 0.084 3.916 21 F -0.117 7.117 22 C -0.177 4.177 23 C -0.105 4.105 24 C -0.146 4.146 25 C -0.183 4.183 26 N -0.133 5.133 27 H 0.100 0.900 28 H 0.108 0.892 29 H 0.090 0.910 30 H 0.086 0.914 31 H 0.226 0.774 32 H -0.189 1.189 33 H -0.171 1.171 34 H 0.093 0.907 35 H 0.085 0.915 36 H 0.096 0.904 37 H 0.227 0.773 38 H 0.119 0.881 39 H 0.096 0.904 40 H 0.154 0.846 41 H 0.154 0.846 42 H 0.152 0.848 43 H 0.146 0.854 44 H 0.096 0.904 45 H 0.116 0.884 46 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -6.661 -0.651 1.181 6.796 hybrid contribution -0.447 -1.542 -0.392 1.653 sum -7.109 -2.193 0.789 7.481 Atomic orbital electron populations 1.20527 0.87049 1.04116 1.03657 1.20255 0.93672 0.85465 1.04578 1.18478 0.92558 0.92775 1.13927 1.23875 0.97909 0.90730 1.01026 1.86527 1.68840 1.26376 1.53178 0.96672 0.82997 0.88227 0.75222 1.19838 0.95070 0.90912 0.98938 1.20514 0.93961 0.97685 1.03020 1.20040 0.82761 0.93977 1.21275 1.16963 0.87540 0.81094 0.76036 1.90848 1.24104 1.74814 1.49558 1.45534 1.09070 1.05574 1.76620 1.21843 0.89595 0.89781 0.97115 0.87310 1.23430 1.03246 0.94846 0.95744 1.21678 1.00058 0.90688 0.96866 0.88220 1.19503 0.92243 0.95259 0.97315 1.21004 0.96523 0.95749 1.03824 1.17710 0.77793 0.94438 1.01701 1.91528 1.31817 1.94247 1.94097 1.21222 0.93473 0.99700 1.03294 1.21049 0.94764 0.96970 0.97715 1.21130 0.99856 0.93059 1.00518 1.23634 1.00707 0.95899 0.98019 1.41770 1.05360 1.08244 1.57947 0.90021 0.89172 0.91005 0.91376 0.77359 1.18919 1.17077 0.90687 0.91475 0.90382 0.77297 0.88061 0.90375 0.84566 0.84643 0.84832 0.85407 0.90429 0.88405 0.74630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.28 10.00 36.00 0.36 0.64 16 2 C 0.08 0.04 7.13 -81.95 -0.58 -0.55 16 3 C -0.17 -0.46 4.43 -105.02 -0.47 -0.93 16 4 C -0.02 -0.01 2.78 36.01 0.10 0.09 16 5 O -0.54 -0.41 12.34 -35.23 -0.43 -0.85 16 6 Si 0.67 0.02 31.48 -169.99 -5.35 -5.33 16 7 C -0.04 -0.18 5.88 -104.16 -0.61 -0.79 16 8 C -0.10 -0.48 9.14 36.00 0.33 -0.15 16 9 C -0.07 -0.21 7.06 -81.97 -0.58 -0.79 16 10 C 0.60 1.99 7.79 -12.85 -0.10 1.89 16 11 O -0.52 -3.56 14.42 5.19 0.07 -3.48 16 12 N -0.72 0.31 5.26 -54.33 -0.29 0.02 16 13 C 0.12 -0.06 4.30 -67.13 -0.29 -0.35 16 14 H 0.11 0.14 7.50 -51.93 -0.39 -0.25 16 15 C -0.13 0.31 7.29 -25.92 -0.19 0.12 16 16 C -0.07 0.16 3.87 -90.82 -0.35 -0.19 16 17 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 18 C -0.04 0.03 5.29 -104.63 -0.55 -0.53 16 19 C -0.15 -0.07 8.61 -39.51 -0.34 -0.41 16 20 C 0.10 0.18 7.30 -39.42 -0.29 -0.11 16 21 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 22 C -0.16 -0.08 10.03 -39.51 -0.40 -0.47 16 23 C -0.09 0.07 10.04 -39.60 -0.40 -0.33 16 24 C -0.13 0.13 9.71 -39.58 -0.38 -0.25 16 25 C -0.14 0.14 7.27 -25.78 -0.19 -0.05 16 26 N -0.54 0.18 5.99 -5.69 -0.03 0.14 16 27 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.09 -0.31 7.23 -51.93 -0.38 -0.69 16 29 H 0.07 -0.31 8.14 -51.93 -0.42 -0.74 16 30 H 0.07 -0.14 6.66 -51.93 -0.35 -0.48 16 31 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 32 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 33 H -0.25 -0.83 5.77 56.52 0.33 -0.50 16 34 H 0.07 0.39 8.14 -51.93 -0.42 -0.04 16 35 H 0.07 0.31 5.01 -51.92 -0.26 0.05 16 36 H 0.08 0.47 6.48 -51.93 -0.34 0.14 16 37 H 0.39 -1.31 7.83 -40.82 -0.32 -1.63 16 38 H 0.10 -0.22 7.73 -51.93 -0.40 -0.62 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.14 -0.07 6.64 -52.48 -0.35 -0.42 16 41 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 42 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 43 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 44 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.10 -0.10 6.30 -51.93 -0.33 -0.42 16 46 H 0.42 -1.65 8.19 -40.82 -0.33 -1.98 16 LS Contribution 378.84 15.07 5.71 5.71 Total: 0.00 -9.93 378.84 -11.33 -21.26 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -6.12 Total: -13.90 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -4.93 Total: -3.15 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.32 Total: 0.16 kcal Atomic # 8 Polarization: -3.97 SS G_CDS: -0.36 Total: -4.33 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: 0.02 SS G_CDS: -5.35 Total: -5.33 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.93 -11.33 -21.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.110 kcal (2) G-P(sol) polarization free energy of solvation -9.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds