Wall clock time and date at job start Mon Mar 8 2021 02:11:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86312 * 109.46713 * 2 1 4 4 C 1.50697 * 109.47282 * 240.00806 * 2 1 3 5 5 C 1.38237 * 119.99502 * 299.99544 * 4 2 1 6 6 C 1.38238 * 120.00141 * 180.02562 * 5 4 2 7 7 C 1.38236 * 119.99712 * 359.95895 * 6 5 4 8 8 C 1.50700 * 119.99895 * 180.02562 * 7 6 5 9 9 C 1.50705 * 109.47024 * 89.99494 * 8 7 6 10 10 O 1.21275 * 119.99947 * 0.02562 * 9 8 7 11 11 N 1.34776 * 119.99715 * 180.02562 * 9 8 7 12 12 C 1.46505 * 119.99597 * 180.02562 * 11 9 8 13 13 H 1.08998 * 112.91090 * 23.74977 * 12 11 9 14 14 C 1.53781 * 113.61334 * 154.99978 * 12 11 9 15 15 C 1.53786 * 87.17350 * 89.07333 * 14 12 11 16 16 H 1.09000 * 113.60973 * 270.92699 * 15 14 12 17 17 C 1.50690 * 113.61518 * 140.02616 * 15 14 12 18 18 C 1.38219 * 119.99225 * 120.00019 * 17 15 14 19 19 C 1.38265 * 120.05551 * 179.97438 * 18 17 15 20 20 C 1.38178 * 120.02533 * 359.97438 * 19 18 17 21 21 C 1.38481 * 119.97410 * 359.97438 * 20 19 18 22 22 F 1.35100 * 120.02649 * 180.02562 * 21 20 19 23 23 C 1.38228 * 119.98529 * 299.72098 * 17 15 14 24 24 C 1.53781 * 113.61146 * 252.49455 * 12 11 9 25 25 C 1.38238 * 120.00045 * 0.26877 * 7 6 5 26 26 C 1.38232 * 119.99909 * 359.54455 * 25 7 6 27 27 H 0.96703 * 114.00181 * 60.00135 * 1 2 3 28 28 H 1.08992 * 109.47493 * 119.99587 * 2 1 3 29 29 H 1.48502 * 109.99681 * 60.00192 * 3 2 1 30 30 H 1.48503 * 109.99754 * 181.31911 * 3 2 1 31 31 H 1.08008 * 120.00291 * 359.97438 * 5 4 2 32 32 H 1.07998 * 120.00234 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.47138 * 330.00267 * 8 7 6 34 34 H 1.08993 * 109.47086 * 209.99586 * 8 7 6 35 35 H 0.96995 * 120.00232 * 359.97438 * 11 9 8 36 36 H 1.09002 * 113.61445 * 203.66333 * 14 12 11 37 37 H 1.09002 * 113.61408 * 334.48063 * 14 12 11 38 38 H 1.07999 * 119.97112 * 359.97438 * 18 17 15 39 39 H 1.08006 * 119.98843 * 179.97438 * 19 18 17 40 40 H 1.07998 * 120.01172 * 180.02562 * 20 19 18 41 41 H 1.08002 * 120.01210 * 0.02562 * 23 17 15 42 42 H 1.09005 * 113.61471 * 25.43638 * 24 12 11 43 43 H 1.09003 * 113.61469 * 156.33416 * 24 12 11 44 44 H 1.08001 * 119.99632 * 179.72790 * 25 7 6 45 45 H 1.08000 * 120.00249 * 180.20286 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7102 -1.2305 5 6 1.5975 -2.0337 -1.4493 6 6 2.0587 -2.6855 -2.5778 7 6 2.8531 -2.0135 -3.4879 8 6 3.3554 -2.7238 -4.7184 9 6 2.3624 -2.5508 -5.8388 10 8 1.3472 -1.9131 -5.6562 11 7 2.6028 -3.1048 -7.0437 12 6 1.6377 -2.9362 -8.1330 13 1 1.0103 -2.0533 -8.0111 14 6 2.2614 -3.0602 -9.5332 15 6 1.9767 -4.5688 -9.4431 16 1 2.7873 -5.1397 -8.9901 17 6 1.4876 -5.1690 -10.7358 18 6 2.2059 -6.1820 -11.3427 19 6 1.7580 -6.7341 -12.5286 20 6 0.5911 -6.2739 -13.1082 21 6 -0.1301 -5.2598 -12.5006 22 9 -1.2714 -4.8095 -13.0661 23 6 0.3175 -4.7103 -11.3113 24 6 0.8465 -4.2141 -8.4583 25 6 3.1909 -0.6914 -3.2667 26 6 2.7265 -0.0385 -2.1402 27 1 -0.3934 0.4417 -0.7651 28 1 1.7924 -0.5137 0.8899 29 1 1.5614 2.4679 1.2086 30 1 3.5346 1.7705 -0.0321 31 1 0.9769 -2.5588 -0.7382 32 1 1.7982 -3.7195 -2.7485 33 1 3.4768 -3.7850 -4.5012 34 1 4.3153 -2.3015 -5.0153 35 1 3.4150 -3.6145 -7.1898 36 1 1.6907 -2.5539 -10.3118 37 1 3.3236 -2.8171 -9.5611 38 1 3.1178 -6.5426 -10.8902 39 1 2.3204 -7.5253 -13.0021 40 1 0.2412 -6.7056 -14.0342 41 1 -0.2458 -3.9216 -10.8349 42 1 0.7667 -4.9040 -7.6181 43 1 -0.1110 -4.0233 -8.9429 44 1 3.8152 -0.1677 -3.9755 45 1 2.9877 0.9953 -1.9690 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:11:46 Heat of formation + Delta-G solvation = -32.419580 kcal Electronic energy + Delta-G solvation = -27789.527107 eV Core-core repulsion = 23653.570320 eV Total energy + Delta-G solvation = -4135.956787 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -49.93338 -41.60638 -40.79332 -39.96046 -38.65373 -37.60497 -34.57699 -33.93532 -31.93882 -31.84017 -31.47368 -29.66734 -26.69294 -26.52154 -25.52783 -23.80409 -23.76281 -22.82430 -22.29259 -21.35082 -20.20061 -18.70592 -18.43779 -17.93586 -17.30645 -17.26417 -17.04120 -16.86067 -16.64113 -16.53502 -16.26966 -15.99619 -15.72898 -15.39832 -15.27882 -14.78802 -14.71763 -14.63812 -14.48241 -14.18822 -14.04340 -13.87915 -13.49446 -13.30955 -13.11694 -12.95421 -12.85980 -12.73565 -12.44612 -12.25909 -11.98628 -11.93684 -11.69516 -11.66630 -11.19058 -10.96770 -10.45298 -10.05600 -9.87727 -9.86671 -9.61111 -9.59392 -5.01051 0.17337 0.23222 0.24902 0.46275 1.30201 1.60053 1.66009 1.92098 2.15591 2.57922 2.80154 3.23217 3.49455 3.50677 3.63523 3.65343 3.70530 3.80483 3.82716 3.92315 3.97056 4.05299 4.07102 4.07455 4.24257 4.29838 4.37894 4.42903 4.46901 4.48987 4.64076 4.66555 4.73303 4.76554 4.85475 4.91789 4.94772 5.02349 5.03798 5.09773 5.12181 5.15548 5.20811 5.38672 5.38919 5.53193 5.54470 5.60098 5.67378 5.94492 6.02911 6.59592 6.71009 7.31493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.774 3.226 4 C -0.128 4.128 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.072 4.072 8 C -0.098 4.098 9 C 0.515 3.485 10 O -0.577 6.577 11 N -0.700 5.700 12 C 0.118 3.882 13 H 0.080 0.920 14 C -0.125 4.125 15 C -0.063 4.063 16 H 0.126 0.874 17 C -0.046 4.046 18 C -0.125 4.125 19 C -0.090 4.090 20 C -0.170 4.170 21 C 0.071 3.929 22 F -0.156 7.156 23 C -0.161 4.161 24 C -0.146 4.146 25 C -0.110 4.110 26 C -0.124 4.124 27 H 0.393 0.607 28 H 0.105 0.895 29 H -0.299 1.299 30 H -0.281 1.281 31 H 0.121 0.879 32 H 0.131 0.869 33 H 0.129 0.871 34 H 0.134 0.866 35 H 0.419 0.581 36 H 0.092 0.908 37 H 0.095 0.905 38 H 0.156 0.844 39 H 0.156 0.844 40 H 0.140 0.860 41 H 0.137 0.863 42 H 0.071 0.929 43 H 0.086 0.914 44 H 0.143 0.857 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.455 -2.780 -3.690 8.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.187 4.187 3 Si 0.680 3.320 4 C -0.129 4.129 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.072 4.072 8 C -0.137 4.137 9 C 0.303 3.697 10 O -0.456 6.456 11 N -0.353 5.353 12 C 0.011 3.989 13 H 0.098 0.902 14 C -0.163 4.163 15 C -0.081 4.081 16 H 0.144 0.856 17 C -0.046 4.046 18 C -0.143 4.143 19 C -0.108 4.108 20 C -0.188 4.188 21 C 0.052 3.948 22 F -0.135 7.135 23 C -0.180 4.180 24 C -0.185 4.185 25 C -0.128 4.128 26 C -0.142 4.142 27 H 0.243 0.757 28 H 0.123 0.877 29 H -0.227 1.227 30 H -0.208 1.208 31 H 0.139 0.861 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.152 0.848 35 H 0.257 0.743 36 H 0.110 0.890 37 H 0.113 0.887 38 H 0.173 0.827 39 H 0.174 0.826 40 H 0.158 0.842 41 H 0.154 0.846 42 H 0.090 0.910 43 H 0.105 0.895 44 H 0.161 0.839 45 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 7.257 -2.032 -2.624 7.980 hybrid contribution -0.459 -0.758 -0.022 0.886 sum 6.798 -2.790 -2.645 7.810 Atomic orbital electron populations 1.86446 1.17537 1.82228 1.50378 1.25225 0.85107 1.11107 0.97234 0.93594 0.78022 0.75666 0.84745 1.20403 0.99699 0.95362 0.97408 1.21079 0.99349 0.94363 0.97936 1.21240 0.97284 1.00675 0.94213 1.19596 0.97687 0.94516 0.95426 1.20759 0.98980 1.04397 0.89540 1.21011 0.86966 0.77736 0.83961 1.90747 1.29973 1.42016 1.82844 1.45556 1.24571 1.55045 1.10127 1.21747 0.91729 0.98361 0.87019 0.90189 1.23352 1.03037 0.94709 0.95221 1.21704 0.98991 0.96048 0.91367 0.85620 1.19728 0.93127 0.95467 0.96295 1.21503 1.01005 0.96078 0.95683 1.21375 0.94638 0.99438 0.95369 1.21424 0.97319 0.97792 1.02303 1.18067 0.84402 0.97737 0.94608 1.91473 1.48636 1.88543 1.84847 1.21139 0.98906 1.02766 0.95163 1.23603 0.98121 0.97666 0.99121 1.21246 1.00039 0.94131 0.97344 1.21171 0.98267 1.00001 0.94734 0.75686 0.87729 1.22666 1.20763 0.86087 0.85082 0.85276 0.84807 0.74336 0.88964 0.88693 0.82676 0.82648 0.84174 0.84571 0.91048 0.89529 0.83933 0.84204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.23 12.77 -148.98 -1.90 -4.13 16 2 C -0.08 -0.20 2.82 71.23 0.20 0.00 16 3 Si 0.77 0.08 29.79 68.60 2.04 2.12 16 4 C -0.13 -0.45 5.39 -19.87 -0.11 -0.55 16 5 C -0.11 -0.50 9.61 22.27 0.21 -0.29 16 6 C -0.12 -0.31 9.70 22.27 0.22 -0.10 16 7 C -0.07 -0.04 4.37 -19.86 -0.09 -0.13 16 8 C -0.10 0.62 5.83 29.10 0.17 0.79 16 9 C 0.52 -0.28 7.82 87.66 0.69 0.40 16 10 O -0.58 -5.86 15.64 -3.01 -0.05 -5.90 16 11 N -0.70 4.42 5.26 -440.03 -2.32 2.10 16 12 C 0.12 -0.41 4.32 45.52 0.20 -0.21 16 13 H 0.08 0.19 7.47 -2.39 -0.02 0.17 16 14 C -0.13 0.89 7.28 31.12 0.23 1.12 16 15 C -0.06 0.46 3.87 -10.92 -0.04 0.42 16 16 H 0.13 -1.47 8.10 -2.39 -0.02 -1.49 16 17 C -0.05 0.14 5.29 -19.87 -0.11 0.04 16 18 C -0.12 0.59 9.71 22.27 0.22 0.81 16 19 C -0.09 0.30 10.04 22.26 0.22 0.52 16 20 C -0.17 -0.15 10.03 22.31 0.22 0.08 16 21 C 0.07 0.30 7.30 22.38 0.16 0.46 16 22 F -0.16 -1.28 17.27 44.97 0.78 -0.50 16 23 C -0.16 -0.16 8.61 22.32 0.19 0.03 16 24 C -0.15 0.53 7.26 31.21 0.23 0.76 16 25 C -0.11 -0.07 9.70 22.27 0.22 0.15 16 26 C -0.12 -0.18 8.67 22.27 0.19 0.01 16 27 H 0.39 -1.26 8.70 -74.06 -0.64 -1.90 16 28 H 0.11 0.37 7.96 -2.39 -0.02 0.35 16 29 H -0.30 -2.17 7.11 99.48 0.71 -1.47 16 30 H -0.28 -1.07 7.11 99.48 0.71 -0.36 16 31 H 0.12 0.53 8.06 -2.91 -0.02 0.51 16 32 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 33 H 0.13 -1.44 8.09 -2.39 -0.02 -1.46 16 34 H 0.13 -1.60 8.08 -2.39 -0.02 -1.62 16 35 H 0.42 -5.59 8.70 -92.71 -0.81 -6.40 16 36 H 0.09 -0.49 7.73 -2.39 -0.02 -0.51 16 37 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 38 H 0.16 -1.59 8.05 -2.91 -0.02 -1.61 16 39 H 0.16 -1.28 8.06 -2.91 -0.02 -1.30 16 40 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 41 H 0.14 -0.02 6.64 -2.91 -0.02 -0.04 16 42 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 43 H 0.09 -0.16 6.31 -2.39 -0.02 -0.18 16 44 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 45 H 0.14 -0.35 4.88 -2.91 -0.01 -0.37 16 Total: 0.00 -23.07 379.87 1.40 -21.67 By element: Atomic # 1 Polarization: -19.29 SS G_CDS: -0.38 Total: -19.67 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: 3.22 Total: 4.31 kcal Atomic # 7 Polarization: 4.42 SS G_CDS: -2.32 Total: 2.10 kcal Atomic # 8 Polarization: -8.09 SS G_CDS: -1.95 Total: -10.03 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 0.78 Total: -0.50 kcal Atomic # 14 Polarization: 0.08 SS G_CDS: 2.04 Total: 2.12 kcal Total: -23.07 1.40 -21.67 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.749 kcal (2) G-P(sol) polarization free energy of solvation -23.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.670 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds