Wall clock time and date at job start Mon Mar 8 2021 02:13:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.39290 * 121.02632 * 2 1 4 4 C 1.46500 * 134.19812 * 0.02562 * 3 2 1 5 5 C 1.50696 * 126.59925 * 359.96964 * 4 3 2 6 6 O 1.42895 * 109.47436 * 285.00524 * 5 4 3 7 7 Si 1.86301 * 109.47010 * 165.00237 * 5 4 3 8 8 C 1.34183 * 106.80048 * 180.23396 * 4 3 2 9 9 N 1.36953 * 109.94726 * 359.57192 * 8 4 3 10 10 C 1.37147 * 110.11754 * 0.44321 * 9 8 4 11 11 N 1.32823 * 132.96986 * 179.73761 * 10 9 8 12 12 C 1.31303 * 121.89390 * 180.02562 * 11 10 9 13 13 C 1.39742 * 121.03461 * 180.02562 * 2 1 3 14 14 C 1.47666 * 120.45756 * 359.96457 * 13 2 1 15 15 O 1.21570 * 119.99474 * 6.11320 * 14 13 2 16 16 N 1.34774 * 120.00162 * 186.10981 * 14 13 2 17 17 C 1.46499 * 119.99753 * 180.02562 * 16 14 13 18 18 H 1.09001 * 112.85070 * 23.80534 * 17 16 14 19 19 C 1.53780 * 113.61499 * 154.99918 * 17 16 14 20 20 C 1.53783 * 87.08134 * 89.11552 * 19 17 16 21 21 H 1.08996 * 113.61504 * 270.80245 * 20 19 17 22 22 C 1.50701 * 113.61772 * 139.98212 * 20 19 17 23 23 C 1.38172 * 119.98862 * 119.99856 * 22 20 19 24 24 C 1.38482 * 119.97284 * 179.97438 * 23 22 20 25 25 F 1.35100 * 120.02412 * 180.02562 * 24 23 22 26 26 C 1.38434 * 119.94888 * 0.02562 * 24 23 22 27 27 C 1.38224 * 119.97680 * 0.02562 * 26 24 23 28 28 C 1.38220 * 120.02163 * 359.74039 * 27 26 24 29 29 C 1.53782 * 87.08070 * 25.43438 * 20 19 17 30 30 H 1.08997 * 109.47222 * 96.41674 * 1 2 3 31 31 H 1.09003 * 109.46864 * 216.41483 * 1 2 3 32 32 H 1.09004 * 109.47481 * 336.41277 * 1 2 3 33 33 H 1.09000 * 109.46697 * 45.00829 * 5 4 3 34 34 H 0.96704 * 114.00015 * 299.99791 * 6 5 4 35 35 H 1.48504 * 110.00052 * 58.68273 * 7 5 4 36 36 H 1.48501 * 109.99957 * 180.02562 * 7 5 4 37 37 H 1.07996 * 125.02492 * 179.73555 * 8 4 3 38 38 H 0.97004 * 124.93853 * 180.20606 * 9 8 4 39 39 H 1.08002 * 119.31667 * 180.02562 * 12 11 10 40 40 H 0.96999 * 119.99733 * 0.02562 * 16 14 13 41 41 H 1.08998 * 113.61638 * 203.66520 * 19 17 16 42 42 H 1.09001 * 113.61416 * 334.57122 * 19 17 16 43 43 H 1.07998 * 120.01089 * 0.02562 * 23 22 20 44 44 H 1.08008 * 120.01208 * 180.02562 * 26 24 23 45 45 H 1.08002 * 119.98584 * 179.97438 * 27 26 24 46 46 H 1.08001 * 119.97338 * 180.25268 * 28 27 26 47 47 H 1.08999 * 113.61589 * 220.01804 * 29 20 19 48 48 H 1.09002 * 113.61517 * 89.11784 * 29 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1936 0.0000 4 6 1.8513 2.6102 0.0005 5 6 0.4523 3.1704 0.0005 6 8 -0.1194 3.0242 -1.3009 7 14 0.5065 4.9761 0.4557 8 6 2.9944 3.3128 -0.0051 9 7 4.0666 2.4607 0.0006 10 6 3.6347 1.1590 0.0002 11 7 4.2720 -0.0063 -0.0002 12 6 3.6267 -1.1499 -0.0011 13 6 2.2274 -1.1974 -0.0005 14 6 1.5226 -2.4950 -0.0003 15 8 0.3125 -2.5294 -0.1118 16 7 2.2209 -3.6411 0.1234 17 6 1.5216 -4.9284 0.1230 18 1 0.5545 -4.8847 -0.3778 19 6 2.3990 -6.1059 -0.3337 20 6 2.8097 -6.2690 1.1392 21 1 3.6829 -5.6788 1.4169 22 6 2.9094 -7.7058 1.5827 23 6 4.1099 -8.2013 2.0543 24 6 4.2011 -9.5215 2.4622 25 9 5.3743 -10.0069 2.9240 26 6 3.0892 -10.3436 2.3964 27 6 1.8895 -9.8460 1.9232 28 6 1.7985 -8.5268 1.5209 29 6 1.4724 -5.6032 1.5041 30 1 -0.3633 -0.1148 -1.0212 31 1 -0.3633 -0.8270 0.6101 32 1 -0.3634 0.9418 0.4112 33 1 -0.1551 2.6307 0.7270 34 1 0.3704 3.4799 -1.9992 35 1 1.3578 5.7178 -0.5090 36 1 -0.8671 5.5403 0.4599 37 1 3.0594 4.3908 -0.0103 38 1 4.9963 2.7376 0.0011 39 1 4.1870 -2.0732 -0.0009 40 1 3.1864 -3.6135 0.2127 41 1 1.8294 -6.9492 -0.7241 42 1 3.2209 -5.8107 -0.9860 43 1 4.9766 -7.5589 2.1056 44 1 3.1590 -11.3733 2.7147 45 1 1.0221 -10.4873 1.8714 46 1 0.8598 -8.1377 1.1552 47 1 1.5461 -4.9021 2.3354 48 1 0.6494 -6.3090 1.6161 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:01 Heat of formation + Delta-G solvation = 20.608824 kcal Electronic energy + Delta-G solvation = -33708.270758 eV Core-core repulsion = 29031.771734 eV Total energy + Delta-G solvation = -4676.499024 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.148 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -49.78983 -42.86707 -41.63935 -40.44804 -39.05283 -38.42827 -37.82068 -35.16404 -34.52398 -32.30337 -31.92712 -31.41143 -30.68269 -28.82344 -26.82485 -26.75580 -26.22522 -24.70724 -24.00432 -23.75878 -22.72035 -21.94716 -20.73084 -20.32248 -19.36908 -18.80407 -18.34415 -17.71010 -17.54093 -17.35415 -17.10237 -17.01200 -16.66312 -16.51284 -16.46880 -16.04736 -15.81456 -15.61199 -15.46236 -15.40304 -14.90277 -14.69986 -14.62121 -14.25983 -14.08986 -13.91876 -13.82377 -13.67383 -13.59597 -13.55931 -13.22768 -13.08650 -12.91701 -12.85510 -12.74475 -12.45152 -11.87504 -11.82364 -11.76706 -11.34445 -11.20552 -11.04699 -10.49301 -10.22873 -10.10879 -9.93369 -9.62594 -9.59042 -9.15734 -5.01988 -0.24126 -0.06878 0.14987 0.21081 1.21688 1.35453 1.48993 1.59085 1.89590 1.92207 2.03193 2.53797 2.83273 3.22543 3.24868 3.34957 3.37200 3.49402 3.57571 3.58142 3.61315 3.71177 3.75201 3.78838 3.88179 4.00657 4.06210 4.07622 4.16717 4.20931 4.26575 4.37446 4.41031 4.56289 4.62947 4.63771 4.73626 4.79046 4.81065 4.85790 4.92649 4.98498 5.03607 5.05915 5.07264 5.14926 5.19521 5.32754 5.37532 5.44764 5.51994 5.60872 5.76576 5.90393 6.07866 6.43097 6.44780 6.84051 7.22800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.067 3.933 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.575 3.425 15 O -0.526 6.526 16 N -0.712 5.712 17 C 0.122 3.878 18 H 0.109 0.891 19 C -0.135 4.135 20 C -0.077 4.077 21 H 0.100 0.900 22 C -0.042 4.042 23 C -0.151 4.151 24 C 0.101 3.899 25 F -0.140 7.140 26 C -0.159 4.159 27 C -0.086 4.086 28 C -0.128 4.128 29 C -0.143 4.143 30 H 0.086 0.914 31 H 0.097 0.903 32 H 0.070 0.930 33 H 0.120 0.880 34 H 0.374 0.626 35 H -0.258 1.258 36 H -0.254 1.254 37 H 0.183 0.817 38 H 0.425 0.575 39 H 0.162 0.838 40 H 0.399 0.601 41 H 0.100 0.900 42 H 0.079 0.921 43 H 0.134 0.866 44 H 0.135 0.865 45 H 0.134 0.866 46 H 0.131 0.869 47 H 0.077 0.923 48 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.832 2.511 1.044 3.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.078 3.922 3 C -0.155 4.155 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.332 6.332 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.363 3.637 15 O -0.403 6.403 16 N -0.364 5.364 17 C 0.017 3.983 18 H 0.127 0.873 19 C -0.173 4.173 20 C -0.095 4.095 21 H 0.118 0.882 22 C -0.042 4.042 23 C -0.170 4.170 24 C 0.082 3.918 25 F -0.118 7.118 26 C -0.178 4.178 27 C -0.105 4.105 28 C -0.146 4.146 29 C -0.182 4.182 30 H 0.105 0.895 31 H 0.115 0.885 32 H 0.088 0.912 33 H 0.137 0.863 34 H 0.222 0.778 35 H -0.183 1.183 36 H -0.178 1.178 37 H 0.200 0.800 38 H 0.264 0.736 39 H 0.179 0.821 40 H 0.235 0.765 41 H 0.119 0.881 42 H 0.097 0.903 43 H 0.152 0.848 44 H 0.153 0.847 45 H 0.152 0.848 46 H 0.149 0.851 47 H 0.095 0.905 48 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.410 3.117 1.058 3.581 hybrid contribution 0.781 -0.347 -0.993 1.310 sum 2.191 2.770 0.065 3.532 Atomic orbital electron populations 1.21181 0.88675 1.03753 1.04331 1.19929 0.97178 0.89149 0.85954 1.19456 0.92756 0.93518 1.09808 1.20624 0.95225 0.91039 1.11482 1.24464 0.90927 1.11700 0.88337 1.86639 1.54242 1.75913 1.16357 0.95168 0.82694 0.73607 0.90028 1.21801 0.85112 0.95968 1.03110 1.41516 1.09604 1.02716 1.63648 1.18497 0.89355 0.85881 0.98780 1.66433 1.40568 0.96009 1.18681 1.22497 0.90077 0.94433 0.91772 1.20404 0.94733 0.93682 1.15369 1.17857 0.86825 0.83180 0.75800 1.90764 1.13521 1.86912 1.49129 1.45563 1.10497 1.05103 1.75220 1.21833 0.97400 0.81863 0.97242 0.87320 1.23441 1.00177 0.98199 0.95506 1.21654 0.99231 0.91898 0.96701 0.88169 1.19529 0.92454 0.95391 0.96829 1.21055 0.99265 0.94217 1.02490 1.17739 0.81842 0.92928 0.99337 1.91521 1.45644 1.88321 1.86336 1.21213 0.92482 1.00714 1.03353 1.21045 0.97095 0.95544 0.96769 1.21108 0.98719 0.93651 1.01141 1.23584 0.96881 0.99666 0.98046 0.89534 0.88476 0.91159 0.86259 0.77833 1.18273 1.17800 0.79972 0.73586 0.82148 0.76529 0.88130 0.90262 0.84800 0.84728 0.84828 0.85093 0.90455 0.88439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.32 8.68 36.00 0.31 -0.01 16 2 C 0.09 0.23 5.98 -103.67 -0.62 -0.39 16 3 C -0.15 -0.32 6.16 -105.12 -0.65 -0.96 16 4 C -0.18 0.03 5.57 -102.73 -0.57 -0.55 16 5 C -0.04 0.03 2.06 36.00 0.07 0.11 16 6 O -0.53 -0.38 12.88 -35.23 -0.45 -0.83 16 7 Si 0.68 -1.58 30.84 -169.99 -5.24 -6.82 16 8 C 0.07 -0.14 10.44 -16.69 -0.17 -0.31 16 9 N -0.57 0.65 6.04 -12.12 -0.07 0.58 16 10 C 0.31 0.58 8.42 -155.72 -1.31 -0.73 16 11 N -0.50 -1.11 10.37 -11.96 -0.12 -1.23 16 12 C 0.18 0.10 10.67 -17.11 -0.18 -0.08 16 13 C -0.23 -0.41 5.89 -104.82 -0.62 -1.03 16 14 C 0.58 1.07 7.72 -12.41 -0.10 0.97 16 15 O -0.53 -2.53 13.10 5.30 0.07 -2.46 16 16 N -0.71 0.88 5.21 -54.02 -0.28 0.59 16 17 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 18 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 19 C -0.14 0.38 7.29 -25.92 -0.19 0.19 16 20 C -0.08 0.19 3.86 -90.96 -0.35 -0.16 16 21 H 0.10 -0.32 8.09 -51.93 -0.42 -0.75 16 22 C -0.04 0.03 5.29 -104.63 -0.55 -0.52 16 23 C -0.15 -0.06 9.69 -39.52 -0.38 -0.44 16 24 C 0.10 0.17 7.30 -39.42 -0.29 -0.12 16 25 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 26 C -0.16 -0.08 10.03 -39.51 -0.40 -0.47 16 27 C -0.09 0.07 10.04 -39.59 -0.40 -0.33 16 28 C -0.13 0.14 8.62 -39.58 -0.34 -0.20 16 29 C -0.14 0.27 7.25 -25.92 -0.19 0.08 16 30 H 0.09 0.30 8.14 -51.93 -0.42 -0.12 16 31 H 0.10 0.34 5.97 -51.93 -0.31 0.03 16 32 H 0.07 0.11 5.05 -51.93 -0.26 -0.15 16 33 H 0.12 -0.10 6.05 -51.93 -0.31 -0.41 16 34 H 0.37 -0.80 8.70 45.56 0.40 -0.40 16 35 H -0.26 0.31 6.99 56.52 0.40 0.71 16 36 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 37 H 0.18 -0.94 6.29 -52.49 -0.33 -1.27 16 38 H 0.43 -1.55 8.96 -40.82 -0.37 -1.91 16 39 H 0.16 -0.49 6.43 -52.49 -0.34 -0.82 16 40 H 0.40 -1.45 6.78 -40.82 -0.28 -1.73 16 41 H 0.10 -0.30 7.73 -51.93 -0.40 -0.70 16 42 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 43 H 0.13 -0.12 8.05 -52.49 -0.42 -0.54 16 44 H 0.13 -0.10 8.06 -52.48 -0.42 -0.53 16 45 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 46 H 0.13 -0.37 6.64 -52.49 -0.35 -0.72 16 47 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 48 H 0.10 -0.23 6.30 -51.93 -0.33 -0.56 16 LS Contribution 394.12 15.07 5.94 5.94 Total: 0.00 -9.45 394.12 -12.76 -22.22 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -5.42 Total: -12.16 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -7.21 Total: -5.42 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.48 Total: -0.06 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.38 Total: -3.30 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.24 Total: -6.82 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.45 -12.76 -22.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.825 kcal (2) G-P(sol) polarization free energy of solvation -9.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.217 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds