Wall clock time and date at job start Mon Mar 8 2021 02:13:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.46714 * 2 1 4 4 C 1.50702 * 109.47275 * 240.00338 * 2 1 3 5 5 C 1.38889 * 119.67835 * 120.00091 * 4 2 1 6 6 C 1.36469 * 120.61922 * 180.02562 * 5 4 2 7 7 C 1.40067 * 119.82938 * 0.02562 * 6 5 4 8 8 C 1.41587 * 133.38694 * 179.97438 * 7 6 5 9 9 C 1.35862 * 107.73284 * 179.77805 * 8 7 6 10 10 C 1.47060 * 125.43185 * 180.25613 * 9 8 7 11 11 O 1.21653 * 119.99624 * 0.16002 * 10 9 8 12 12 N 1.34774 * 120.00088 * 180.16214 * 10 9 8 13 13 C 1.46506 * 119.99966 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84552 * 336.19680 * 13 12 10 15 15 C 1.53777 * 113.61314 * 107.50494 * 13 12 10 16 16 C 1.53773 * 87.08167 * 89.11913 * 15 13 12 17 17 H 1.09003 * 113.69019 * 270.86984 * 16 15 13 18 18 C 1.50699 * 113.61842 * 139.98164 * 16 15 13 19 19 C 1.38222 * 119.98895 * 142.49886 * 18 16 15 20 20 C 1.38271 * 120.05096 * 179.97438 * 19 18 16 21 21 C 1.38173 * 120.02242 * 359.97438 * 20 19 18 22 22 C 1.38481 * 119.97743 * 0.02562 * 21 20 19 23 23 F 1.35101 * 120.02773 * 180.02562 * 22 21 20 24 24 C 1.38226 * 119.98357 * 322.22466 * 18 16 15 25 25 C 1.53777 * 113.61244 * 205.00347 * 13 12 10 26 26 N 1.38151 * 109.14534 * 0.39767 * 9 8 7 27 27 C 1.37486 * 108.78576 * 359.59524 * 26 9 8 28 28 C 1.37718 * 119.67234 * 300.03984 * 4 2 1 29 29 H 0.96705 * 113.99928 * 60.00111 * 1 2 3 30 30 H 1.08997 * 109.46883 * 120.00019 * 2 1 3 31 31 H 1.48500 * 110.00548 * 298.67910 * 3 2 1 32 32 H 1.48498 * 110.00149 * 60.00032 * 3 2 1 33 33 H 1.08002 * 119.69361 * 0.02562 * 5 4 2 34 34 H 1.08002 * 120.08771 * 180.02562 * 6 5 4 35 35 H 1.08007 * 126.13698 * 0.05453 * 8 7 6 36 36 H 0.96996 * 120.00530 * 0.02562 * 12 10 9 37 37 H 1.09003 * 113.60788 * 203.66511 * 15 13 12 38 38 H 1.08999 * 113.61507 * 334.56039 * 15 13 12 39 39 H 1.07995 * 119.97753 * 0.02562 * 19 18 16 40 40 H 1.07994 * 119.98895 * 179.97438 * 20 19 18 41 41 H 1.08005 * 120.00907 * 180.02562 * 21 20 19 42 42 H 1.07993 * 120.00976 * 0.02562 * 24 18 16 43 43 H 1.08998 * 113.62016 * 25.43345 * 25 13 12 44 44 H 1.09007 * 113.61439 * 156.25266 * 25 13 12 45 45 H 0.97001 * 125.60971 * 179.86621 * 26 9 8 46 46 H 1.08001 * 120.09722 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7295 -0.0289 -2.1403 6 6 3.1945 -0.6532 -3.2611 7 6 2.8652 -1.9936 -3.4994 8 6 3.1790 -2.9022 -4.5390 9 6 2.5850 -4.0883 -4.2452 10 6 2.6630 -5.3069 -5.0646 11 8 3.3027 -5.3041 -6.0994 12 7 2.0257 -6.4267 -4.6693 13 6 2.1029 -7.6406 -5.4860 14 1 2.3244 -7.4330 -6.5329 15 6 2.9869 -8.7398 -4.8736 16 6 1.7257 -9.2421 -4.1513 17 1 1.5639 -8.7778 -3.1784 18 6 1.6120 -10.7442 -4.1088 19 6 1.1061 -11.3672 -2.9834 20 6 1.0008 -12.7453 -2.9433 21 6 1.4008 -13.5012 -4.0286 22 6 1.9078 -12.8780 -5.1566 23 9 2.2987 -13.6161 -6.2186 24 6 2.0085 -11.4980 -5.1975 25 6 0.9137 -8.5946 -5.2854 26 7 1.8933 -3.9662 -3.0555 27 6 2.0553 -2.6870 -2.5784 28 6 1.5939 -2.0286 -1.4422 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4586 -1.2242 32 1 1.5614 2.4679 1.2085 33 1 2.9845 1.0048 -1.9590 34 1 3.8149 -0.1152 -3.9627 35 1 3.7858 -2.6917 -5.4073 36 1 1.5153 -6.4289 -3.8445 37 1 3.3793 -9.4438 -5.6074 38 1 3.7537 -8.3584 -4.1993 39 1 0.7921 -10.7772 -2.1352 40 1 0.6058 -13.2311 -2.0634 41 1 1.3180 -14.5776 -3.9972 42 1 2.3999 -11.0107 -6.0781 43 1 0.0067 -8.0961 -4.9436 44 1 0.7384 -9.2581 -6.1324 45 1 1.3812 -4.6688 -2.6253 46 1 0.9719 -2.5497 -0.7295 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:09 Heat of formation + Delta-G solvation = 7.923764 kcal Electronic energy + Delta-G solvation = -30766.171475 eV Core-core repulsion = 26310.085915 eV Total energy + Delta-G solvation = -4456.085560 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -49.94647 -42.73493 -41.54304 -40.28453 -39.10000 -38.62853 -36.97725 -34.81527 -33.28033 -32.02336 -31.50677 -30.98108 -30.40322 -27.34180 -26.77152 -26.15030 -24.54393 -23.72497 -23.20781 -22.70275 -22.01656 -21.32910 -20.37875 -19.59258 -18.64438 -18.42721 -17.83881 -17.29839 -17.08252 -17.02608 -16.84524 -16.66144 -16.53635 -16.18393 -15.89285 -15.66267 -15.51812 -15.17444 -15.11624 -14.82350 -14.75870 -14.66172 -14.48588 -14.20132 -14.02738 -13.93735 -13.53654 -13.17153 -13.02270 -12.96092 -12.56547 -12.50886 -12.48800 -12.10441 -12.03346 -11.76651 -11.56308 -11.45260 -11.26955 -10.97736 -10.59441 -10.31267 -9.91294 -9.63902 -9.33572 -8.82963 -4.85809 -0.38360 0.14811 0.20940 0.53194 0.92749 1.35320 1.66076 1.70782 1.91139 2.02464 2.14168 2.55178 2.76955 3.19820 3.41423 3.42918 3.53292 3.58887 3.64082 3.67737 3.74192 3.79052 3.90333 4.04227 4.04650 4.20384 4.24119 4.25598 4.29633 4.39798 4.45246 4.53153 4.58062 4.66636 4.71307 4.77262 4.80661 4.88664 4.90546 4.96259 4.99599 5.05087 5.08883 5.15616 5.28554 5.35045 5.40641 5.43734 5.53869 5.57112 5.57917 5.91924 5.98115 6.23081 6.42107 6.51345 6.91998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.078 4.078 3 Si 0.766 3.234 4 C -0.086 4.086 5 C -0.147 4.147 6 C -0.059 4.059 7 C -0.135 4.135 8 C -0.118 4.118 9 C 0.011 3.989 10 C 0.589 3.411 11 O -0.559 6.559 12 N -0.693 5.693 13 C 0.115 3.885 14 H 0.090 0.910 15 C -0.144 4.144 16 C -0.065 4.065 17 H 0.123 0.877 18 C -0.046 4.046 19 C -0.126 4.126 20 C -0.091 4.091 21 C -0.169 4.169 22 C 0.072 3.928 23 F -0.155 7.155 24 C -0.160 4.160 25 C -0.125 4.125 26 N -0.563 5.563 27 C 0.108 3.892 28 C -0.108 4.108 29 H 0.386 0.614 30 H 0.129 0.871 31 H -0.284 1.284 32 H -0.306 1.306 33 H 0.146 0.854 34 H 0.146 0.854 35 H 0.154 0.846 36 H 0.413 0.587 37 H 0.094 0.906 38 H 0.072 0.928 39 H 0.154 0.846 40 H 0.155 0.845 41 H 0.141 0.859 42 H 0.139 0.861 43 H 0.093 0.907 44 H 0.099 0.901 45 H 0.432 0.568 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.642 0.228 5.342 5.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.187 4.187 3 Si 0.672 3.328 4 C -0.088 4.088 5 C -0.166 4.166 6 C -0.077 4.077 7 C -0.139 4.139 8 C -0.145 4.145 9 C -0.099 4.099 10 C 0.376 3.624 11 O -0.437 6.437 12 N -0.344 5.344 13 C 0.010 3.990 14 H 0.109 0.891 15 C -0.183 4.183 16 C -0.083 4.083 17 H 0.141 0.859 18 C -0.046 4.046 19 C -0.143 4.143 20 C -0.108 4.108 21 C -0.188 4.188 22 C 0.053 3.947 23 F -0.134 7.134 24 C -0.178 4.178 25 C -0.163 4.163 26 N -0.169 5.169 27 C -0.002 4.002 28 C -0.129 4.129 29 H 0.236 0.764 30 H 0.147 0.853 31 H -0.211 1.211 32 H -0.234 1.234 33 H 0.163 0.837 34 H 0.164 0.836 35 H 0.172 0.828 36 H 0.250 0.750 37 H 0.113 0.887 38 H 0.091 0.909 39 H 0.172 0.828 40 H 0.173 0.827 41 H 0.158 0.842 42 H 0.157 0.843 43 H 0.112 0.888 44 H 0.118 0.882 45 H 0.273 0.727 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -1.373 0.511 5.106 5.312 hybrid contribution -1.320 -0.956 -0.527 1.713 sum -2.693 -0.445 4.579 5.331 Atomic orbital electron populations 1.86569 1.18422 1.80356 1.50244 1.25191 0.83441 1.11565 0.98540 0.93951 0.90516 0.72182 0.76167 1.20082 0.98190 0.93745 0.96830 1.20682 1.00328 1.00660 0.94902 1.20626 0.98016 0.91811 0.97287 1.18438 1.03393 0.95643 0.96474 1.21107 1.02233 0.91092 1.00063 1.19920 1.03779 0.95973 0.90198 1.17282 0.78864 0.82185 0.84066 1.90869 1.43082 1.84376 1.25342 1.45391 1.52191 1.10021 1.26842 1.21909 0.98229 0.83228 0.95681 0.89134 1.23567 0.96833 0.97546 1.00328 1.21668 0.96713 0.89691 1.00190 0.85886 1.19685 0.96548 0.95642 0.92751 1.21492 0.99413 0.94838 0.98596 1.21364 0.97294 0.94134 0.98038 1.21428 1.02111 1.01942 0.93295 1.18057 1.01471 0.90009 0.85179 1.91477 1.89058 1.77414 1.55482 1.21138 1.03966 0.91502 1.01227 1.23386 0.97006 0.96917 0.98960 1.41761 1.44774 1.11172 1.19225 1.18434 1.00083 0.85120 0.96584 1.19994 1.02713 0.94362 0.95830 0.76447 0.85333 1.21086 1.23422 0.83693 0.83585 0.82789 0.75030 0.88744 0.90919 0.82834 0.82711 0.84159 0.84305 0.88833 0.88243 0.72735 0.84535 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.11 12.76 -148.98 -1.90 -2.01 16 2 C -0.08 0.22 2.81 71.24 0.20 0.42 16 3 Si 0.77 -2.54 29.75 68.60 2.04 -0.50 16 4 C -0.09 0.16 5.40 -19.83 -0.11 0.05 16 5 C -0.15 0.33 8.59 22.01 0.19 0.52 16 6 C -0.06 0.03 10.06 22.30 0.22 0.25 16 7 C -0.14 -0.34 6.16 -21.36 -0.13 -0.48 16 8 C -0.12 -0.47 10.53 22.54 0.24 -0.23 16 9 C 0.01 0.02 6.97 39.91 0.28 0.30 16 10 C 0.59 1.93 7.80 86.56 0.68 2.61 16 11 O -0.56 -6.67 16.44 -4.20 -0.07 -6.74 16 12 N -0.69 2.96 5.26 -443.64 -2.33 0.63 16 13 C 0.11 -0.39 4.32 45.51 0.20 -0.19 16 14 H 0.09 0.12 7.46 -2.39 -0.02 0.10 16 15 C -0.14 0.59 7.25 31.12 0.23 0.82 16 16 C -0.06 0.48 3.86 -11.02 -0.04 0.44 16 17 H 0.12 -1.44 8.09 -2.39 -0.02 -1.46 16 18 C -0.05 0.16 5.29 -19.87 -0.11 0.06 16 19 C -0.13 0.61 9.71 22.27 0.22 0.83 16 20 C -0.09 0.31 10.04 22.26 0.22 0.53 16 21 C -0.17 -0.10 10.03 22.31 0.22 0.12 16 22 C 0.07 0.27 7.30 22.37 0.16 0.44 16 23 F -0.16 -1.20 17.27 44.97 0.78 -0.42 16 24 C -0.16 -0.06 8.58 22.31 0.19 0.14 16 25 C -0.12 0.91 7.29 31.12 0.23 1.14 16 26 N -0.56 1.86 6.07 -177.18 -1.08 0.78 16 27 C 0.11 0.04 7.25 39.13 0.28 0.32 16 28 C -0.11 0.13 9.61 22.37 0.22 0.35 16 29 H 0.39 -1.88 8.70 -74.05 -0.64 -2.52 16 30 H 0.13 -0.62 7.96 -2.39 -0.02 -0.64 16 31 H -0.28 -0.23 7.11 99.48 0.71 0.48 16 32 H -0.31 -1.45 7.11 99.48 0.71 -0.74 16 33 H 0.15 -0.89 4.82 -2.91 -0.01 -0.91 16 34 H 0.15 -0.61 8.06 -2.91 -0.02 -0.63 16 35 H 0.15 0.58 8.06 -2.91 -0.02 0.56 16 36 H 0.41 -4.53 7.76 -92.71 -0.72 -5.25 16 37 H 0.09 -0.30 6.32 -2.39 -0.02 -0.31 16 38 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.15 -1.56 8.05 -2.91 -0.02 -1.58 16 40 H 0.16 -1.26 8.06 -2.91 -0.02 -1.29 16 41 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 42 H 0.14 -0.17 6.67 -2.91 -0.02 -0.19 16 43 H 0.09 -0.91 8.14 -2.39 -0.02 -0.92 16 44 H 0.10 -0.62 7.72 -2.38 -0.02 -0.63 16 45 H 0.43 -4.48 8.12 -92.71 -0.75 -5.24 16 46 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 Total: 0.00 -21.98 388.86 0.02 -21.96 By element: Atomic # 1 Polarization: -21.12 SS G_CDS: -1.00 Total: -22.12 kcal Atomic # 6 Polarization: 4.84 SS G_CDS: 3.58 Total: 8.42 kcal Atomic # 7 Polarization: 4.82 SS G_CDS: -3.41 Total: 1.41 kcal Atomic # 8 Polarization: -6.78 SS G_CDS: -1.97 Total: -8.75 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.78 Total: -0.42 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.04 Total: -0.50 kcal Total: -21.98 0.02 -21.96 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.880 kcal (2) G-P(sol) polarization free energy of solvation -21.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.018 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds