Wall clock time and date at job start Mon Mar 8 2021 02:13:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.47199 * 2 1 4 4 C 1.50705 * 109.46964 * 240.00007 * 2 1 3 5 5 C 1.34191 * 126.53789 * 104.97784 * 4 2 1 6 6 N 1.36859 * 109.96577 * 180.28463 * 5 4 2 7 7 C 1.37406 * 109.98228 * 359.55741 * 6 5 4 8 8 C 1.39325 * 133.25148 * 180.12547 * 7 6 5 9 9 C 1.36357 * 120.23494 * 180.31372 * 8 7 6 10 10 C 1.40173 * 120.66846 * 0.04362 * 9 8 7 11 11 C 1.47656 * 119.96900 * 179.97438 * 10 9 8 12 12 O 1.21582 * 119.99372 * 179.97438 * 11 10 9 13 13 N 1.34772 * 120.00439 * 359.97438 * 11 10 9 14 14 C 1.46498 * 120.00084 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.84954 * 23.80441 * 14 13 11 16 16 C 1.53778 * 113.61517 * 155.00298 * 14 13 11 17 17 C 1.53777 * 87.08243 * 89.11707 * 16 14 13 18 18 H 1.09008 * 113.61473 * 270.79893 * 17 16 14 19 19 C 1.50700 * 113.61823 * 139.98513 * 17 16 14 20 20 C 1.38227 * 119.98482 * 299.72272 * 19 17 16 21 21 C 1.38262 * 120.05537 * 179.76429 * 20 19 17 22 22 C 1.38180 * 120.02336 * 0.51144 * 21 20 19 23 23 C 1.38482 * 119.97157 * 359.74008 * 22 21 20 24 24 F 1.35103 * 120.02420 * 180.02562 * 23 22 21 25 25 C 1.38219 * 119.99342 * 119.99551 * 19 17 16 26 26 C 1.53781 * 87.08161 * 25.43394 * 17 16 14 27 27 C 1.39185 * 120.05107 * 359.95149 * 10 9 8 28 28 C 1.39225 * 119.39788 * 0.02650 * 27 10 9 29 29 H 0.96694 * 113.99845 * 299.99473 * 1 2 3 30 30 H 1.08999 * 109.46662 * 120.00460 * 2 1 3 31 31 H 1.48497 * 109.99892 * 178.67962 * 3 2 1 32 32 H 1.48501 * 109.99983 * 300.00342 * 3 2 1 33 33 H 1.08002 * 125.01454 * 0.02562 * 5 4 2 34 34 H 0.97003 * 125.01013 * 179.72832 * 6 5 4 35 35 H 1.07997 * 119.88397 * 0.31329 * 8 7 6 36 36 H 1.07998 * 119.66843 * 180.02562 * 9 8 7 37 37 H 0.96998 * 119.99717 * 0.02562 * 13 11 10 38 38 H 1.08998 * 113.61744 * 203.66596 * 16 14 13 39 39 H 1.08999 * 113.61237 * 334.48458 * 16 14 13 40 40 H 1.08010 * 119.97017 * 359.97438 * 20 19 17 41 41 H 1.07996 * 119.99060 * 180.25623 * 21 20 19 42 42 H 1.07996 * 120.01234 * 179.72558 * 22 21 20 43 43 H 1.07999 * 120.00968 * 0.02562 * 25 19 17 44 44 H 1.09004 * 113.61314 * 220.01699 * 26 17 16 45 45 H 1.08998 * 113.61360 * 89.11688 * 26 17 16 46 46 H 1.08008 * 120.29718 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4604 -0.1386 -2.3232 6 7 2.7967 -1.0999 -3.2374 7 6 2.4948 -2.3454 -2.7417 8 6 2.6335 -3.6349 -3.2508 9 6 2.2303 -4.7103 -2.5159 10 6 1.6713 -4.5368 -1.2421 11 6 1.2394 -5.7123 -0.4598 12 8 0.7550 -5.5624 0.6452 13 7 1.3822 -6.9513 -0.9706 14 6 0.9542 -8.1175 -0.1942 15 1 0.1937 -7.8757 0.5484 16 6 0.6034 -9.3390 -1.0600 17 6 2.0832 -9.7428 -0.9508 18 1 2.7101 -9.3206 -1.7363 19 6 2.2929 -11.2239 -0.7675 20 6 1.7588 -11.8661 0.3338 21 6 1.9463 -13.2258 0.5009 22 6 2.6768 -13.9422 -0.4277 23 6 3.2168 -13.2989 -1.5287 24 9 3.9308 -13.9985 -2.4376 25 6 3.0240 -11.9385 -1.6977 26 6 2.1217 -8.9477 0.3649 27 6 1.5236 -3.2575 -0.7142 28 6 1.9349 -2.1577 -1.4623 29 1 -0.3933 0.4416 0.7650 30 1 1.7923 -0.5139 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5615 2.4679 -1.2085 33 1 2.5965 0.9237 -2.4624 34 1 3.1923 -0.9277 -4.1062 35 1 3.0618 -3.7832 -4.2311 36 1 2.3424 -5.7058 -2.9193 37 1 1.7690 -7.0708 -1.8521 38 1 -0.0770 -10.0381 -0.5736 39 1 0.2932 -9.0817 -2.0727 40 1 1.1917 -11.3060 1.0627 41 1 1.5250 -13.7273 1.3596 42 1 2.8269 -15.0034 -0.2947 43 1 3.4453 -11.4356 -2.5556 44 1 3.0387 -8.3746 0.5020 45 1 1.8565 -9.5397 1.2408 46 1 1.0931 -3.1192 0.2667 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:25 Heat of formation + Delta-G solvation = 6.193002 kcal Electronic energy + Delta-G solvation = -30940.994018 eV Core-core repulsion = 26484.833407 eV Total energy + Delta-G solvation = -4456.160611 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -49.79259 -42.51966 -41.58932 -40.28668 -38.76676 -37.79205 -37.37565 -34.55547 -33.39291 -32.21430 -31.36289 -30.80317 -30.38417 -26.80636 -26.56821 -26.42334 -24.76187 -23.77519 -23.52397 -22.72104 -21.67598 -20.60996 -20.27457 -19.12946 -18.63500 -18.31019 -18.19166 -17.43305 -17.34590 -17.09615 -16.95894 -16.50378 -16.05849 -16.00956 -15.70175 -15.57533 -15.38991 -15.07385 -15.04266 -14.79924 -14.73758 -14.60165 -14.17538 -14.15881 -13.85523 -13.80958 -13.60410 -13.50022 -13.02826 -12.84883 -12.77682 -12.70345 -12.55073 -12.03128 -11.87482 -11.85869 -11.75492 -11.32304 -10.85701 -10.81577 -10.20491 -10.06439 -9.93287 -9.60931 -9.35689 -8.86583 -5.03198 -0.07936 0.14876 0.15824 0.21092 1.27734 1.39811 1.64595 1.91560 1.93915 1.96531 2.10980 2.53969 2.93199 3.22635 3.35246 3.51219 3.56172 3.59033 3.62713 3.65479 3.76957 3.81457 3.89463 3.92723 4.01872 4.06471 4.10448 4.16969 4.23410 4.34894 4.37713 4.45039 4.53832 4.58334 4.64503 4.73878 4.79847 4.81936 4.86108 4.94575 4.99124 5.04713 5.07798 5.14900 5.22683 5.32841 5.34180 5.44685 5.49657 5.56306 5.61784 5.90411 5.94295 6.31609 6.52720 6.73258 7.30086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.687 3.313 4 C -0.144 4.144 5 C 0.056 3.944 6 N -0.584 5.584 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.569 3.431 12 O -0.535 6.535 13 N -0.712 5.712 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.135 4.135 17 C -0.076 4.076 18 H 0.099 0.901 19 C -0.042 4.042 20 C -0.128 4.128 21 C -0.086 4.086 22 C -0.159 4.159 23 C 0.101 3.899 24 F -0.140 7.140 25 C -0.152 4.152 26 C -0.143 4.143 27 C 0.011 3.989 28 C -0.101 4.101 29 H 0.380 0.620 30 H 0.073 0.927 31 H -0.256 1.256 32 H -0.253 1.253 33 H 0.170 0.830 34 H 0.422 0.578 35 H 0.129 0.871 36 H 0.129 0.871 37 H 0.400 0.600 38 H 0.100 0.900 39 H 0.078 0.922 40 H 0.131 0.869 41 H 0.134 0.866 42 H 0.135 0.865 43 H 0.134 0.866 44 H 0.076 0.924 45 H 0.097 0.903 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.733 2.672 -0.529 2.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.071 4.071 6 N -0.186 5.186 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.358 3.642 12 O -0.412 6.412 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.094 4.094 18 H 0.118 0.882 19 C -0.042 4.042 20 C -0.146 4.146 21 C -0.104 4.104 22 C -0.178 4.178 23 C 0.081 3.919 24 F -0.118 7.118 25 C -0.171 4.171 26 C -0.182 4.182 27 C -0.009 4.009 28 C -0.106 4.106 29 H 0.228 0.772 30 H 0.090 0.910 31 H -0.180 1.180 32 H -0.178 1.178 33 H 0.187 0.813 34 H 0.259 0.741 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.235 0.765 38 H 0.119 0.881 39 H 0.097 0.903 40 H 0.149 0.851 41 H 0.152 0.848 42 H 0.153 0.847 43 H 0.152 0.848 44 H 0.095 0.905 45 H 0.116 0.884 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.037 3.100 -0.865 3.382 hybrid contribution 0.744 -0.746 -1.407 1.758 sum 1.782 2.354 -2.272 3.725 Atomic orbital electron populations 1.86534 1.17405 1.81822 1.49434 1.23999 0.85456 1.09359 0.96173 0.94976 0.80774 0.77603 0.87838 1.19640 1.07817 0.91338 0.96292 1.21583 1.01951 0.94086 0.89434 1.41692 1.55088 1.04131 1.17732 1.18441 0.99892 0.86469 0.94108 1.19662 1.05793 0.88739 1.01157 1.20581 0.96687 0.98303 0.92998 1.19515 1.08343 0.93206 0.96292 1.18148 0.77676 0.82742 0.85665 1.90794 1.44263 1.85993 1.20159 1.45554 1.64709 1.05201 1.20929 1.21831 0.97498 0.84371 0.94745 0.87391 1.23435 0.95712 0.96830 1.01324 1.21646 0.97822 0.90524 0.99456 0.88248 1.19533 0.95774 0.95116 0.93759 1.21115 1.00933 0.94589 0.97973 1.21046 0.96921 0.94005 0.98457 1.21212 1.00655 1.01295 0.94592 1.17737 0.95206 0.90131 0.88787 1.91521 1.75829 1.78948 1.65538 1.21048 1.02162 0.92445 1.01404 1.23585 0.99856 0.97890 0.96865 1.20671 0.92239 0.89094 0.98857 1.18897 1.04540 0.92745 0.94415 0.77232 0.90950 1.18018 1.17786 0.81317 0.74056 0.85358 0.85367 0.76456 0.88140 0.90312 0.85071 0.84808 0.84718 0.84841 0.90482 0.88439 0.84257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.62 12.86 -35.23 -0.45 -1.08 16 2 C -0.04 -0.02 3.05 36.01 0.11 0.09 16 3 Si 0.69 -0.99 30.80 -169.99 -5.23 -6.22 16 4 C -0.14 -0.39 5.61 -102.69 -0.58 -0.96 16 5 C 0.06 0.06 10.43 -16.73 -0.17 -0.12 16 6 N -0.58 0.02 6.05 -10.61 -0.06 -0.05 16 7 C 0.12 0.21 7.27 -83.95 -0.61 -0.40 16 8 C -0.13 0.00 10.00 -39.86 -0.40 -0.40 16 9 C -0.07 0.01 9.46 -39.53 -0.37 -0.37 16 10 C -0.17 -0.40 5.87 -104.97 -0.62 -1.02 16 11 C 0.57 1.77 7.76 -12.42 -0.10 1.67 16 12 O -0.53 -3.62 15.93 5.29 0.08 -3.54 16 13 N -0.71 0.17 5.21 -54.02 -0.28 -0.11 16 14 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 15 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 16 C -0.14 0.30 7.29 -25.92 -0.19 0.11 16 17 C -0.08 0.15 3.86 -90.96 -0.35 -0.20 16 18 H 0.10 -0.28 8.09 -51.92 -0.42 -0.70 16 19 C -0.04 0.02 5.29 -104.63 -0.55 -0.53 16 20 C -0.13 0.11 8.62 -39.58 -0.34 -0.23 16 21 C -0.09 0.05 10.04 -39.59 -0.40 -0.35 16 22 C -0.16 -0.10 10.03 -39.51 -0.40 -0.50 16 23 C 0.10 0.19 7.30 -39.42 -0.29 -0.10 16 24 F -0.14 -0.46 17.27 2.25 0.04 -0.42 16 25 C -0.15 -0.09 9.69 -39.52 -0.38 -0.47 16 26 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 27 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 28 C -0.10 -0.35 6.34 -105.16 -0.67 -1.02 16 29 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 30 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 31 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 32 H -0.25 -0.25 7.04 56.52 0.40 0.15 16 33 H 0.17 -0.15 6.30 -52.49 -0.33 -0.48 16 34 H 0.42 -1.39 8.96 -40.82 -0.37 -1.75 16 35 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 36 H 0.13 -0.43 6.36 -52.49 -0.33 -0.76 16 37 H 0.40 -1.12 6.70 -40.82 -0.27 -1.39 16 38 H 0.10 -0.25 7.73 -51.93 -0.40 -0.65 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.13 -0.33 6.64 -52.48 -0.35 -0.68 16 41 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 42 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 43 H 0.13 -0.10 8.05 -52.49 -0.42 -0.52 16 44 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.10 -0.17 6.29 -51.93 -0.33 -0.50 16 46 H 0.14 0.59 7.64 -52.48 -0.40 0.19 16 LS Contribution 388.81 15.07 5.86 5.86 Total: 0.00 -10.39 388.81 -12.55 -22.94 By element: Atomic # 1 Polarization: -6.53 SS G_CDS: -5.34 Total: -11.88 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -7.16 Total: -5.50 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.35 Total: -0.16 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.37 Total: -4.62 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.23 Total: -6.22 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.39 -12.55 -22.94 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.134 kcal (2) G-P(sol) polarization free energy of solvation -10.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.941 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds