Wall clock time and date at job start Mon Mar 8 2021 02:13:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.47199 * 2 1 4 4 C 1.50705 * 109.46964 * 240.00007 * 2 1 3 5 5 C 1.34191 * 126.53789 * 104.97784 * 4 2 1 6 6 N 1.36859 * 109.96577 * 180.28463 * 5 4 2 7 7 C 1.37406 * 109.98228 * 359.55741 * 6 5 4 8 8 C 1.39325 * 133.25148 * 180.12547 * 7 6 5 9 9 C 1.36357 * 120.23494 * 180.31372 * 8 7 6 10 10 C 1.40173 * 120.66846 * 0.04362 * 9 8 7 11 11 C 1.47656 * 119.96900 * 179.97438 * 10 9 8 12 12 O 1.21582 * 119.99372 * 179.97438 * 11 10 9 13 13 N 1.34772 * 120.00439 * 359.97438 * 11 10 9 14 14 C 1.46498 * 120.00084 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.84954 * 23.80441 * 14 13 11 16 16 C 1.53778 * 113.61517 * 155.00298 * 14 13 11 17 17 C 1.53777 * 87.08243 * 89.11707 * 16 14 13 18 18 H 1.09008 * 113.61473 * 270.79893 * 17 16 14 19 19 C 1.50700 * 113.61823 * 139.98513 * 17 16 14 20 20 C 1.38227 * 119.98482 * 299.72272 * 19 17 16 21 21 C 1.38262 * 120.05537 * 179.76429 * 20 19 17 22 22 C 1.38180 * 120.02336 * 0.51144 * 21 20 19 23 23 C 1.38482 * 119.97157 * 359.74008 * 22 21 20 24 24 F 1.35103 * 120.02420 * 180.02562 * 23 22 21 25 25 C 1.38219 * 119.99342 * 119.99551 * 19 17 16 26 26 C 1.53781 * 87.08161 * 25.43394 * 17 16 14 27 27 C 1.39185 * 120.05107 * 359.95149 * 10 9 8 28 28 C 1.39225 * 119.39788 * 0.02650 * 27 10 9 29 29 H 0.96694 * 113.99845 * 299.99473 * 1 2 3 30 30 H 1.08999 * 109.46662 * 120.00460 * 2 1 3 31 31 H 1.48497 * 109.99892 * 178.67962 * 3 2 1 32 32 H 1.48501 * 109.99983 * 300.00342 * 3 2 1 33 33 H 1.08002 * 125.01454 * 0.02562 * 5 4 2 34 34 H 0.97003 * 125.01013 * 179.72832 * 6 5 4 35 35 H 1.07997 * 119.88397 * 0.31329 * 8 7 6 36 36 H 1.07998 * 119.66843 * 180.02562 * 9 8 7 37 37 H 0.96998 * 119.99717 * 0.02562 * 13 11 10 38 38 H 1.08998 * 113.61744 * 203.66596 * 16 14 13 39 39 H 1.08999 * 113.61237 * 334.48458 * 16 14 13 40 40 H 1.08010 * 119.97017 * 359.97438 * 20 19 17 41 41 H 1.07996 * 119.99060 * 180.25623 * 21 20 19 42 42 H 1.07996 * 120.01234 * 179.72558 * 22 21 20 43 43 H 1.07999 * 120.00968 * 0.02562 * 25 19 17 44 44 H 1.09004 * 113.61314 * 220.01699 * 26 17 16 45 45 H 1.08998 * 113.61360 * 89.11688 * 26 17 16 46 46 H 1.08008 * 120.29718 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4604 -0.1386 -2.3232 6 7 2.7967 -1.0999 -3.2374 7 6 2.4948 -2.3454 -2.7417 8 6 2.6335 -3.6349 -3.2508 9 6 2.2303 -4.7103 -2.5159 10 6 1.6713 -4.5368 -1.2421 11 6 1.2394 -5.7123 -0.4598 12 8 0.7550 -5.5624 0.6452 13 7 1.3822 -6.9513 -0.9706 14 6 0.9542 -8.1175 -0.1942 15 1 0.1937 -7.8757 0.5484 16 6 0.6034 -9.3390 -1.0600 17 6 2.0832 -9.7428 -0.9508 18 1 2.7101 -9.3206 -1.7363 19 6 2.2929 -11.2239 -0.7675 20 6 1.7588 -11.8661 0.3338 21 6 1.9463 -13.2258 0.5009 22 6 2.6768 -13.9422 -0.4277 23 6 3.2168 -13.2989 -1.5287 24 9 3.9308 -13.9985 -2.4376 25 6 3.0240 -11.9385 -1.6977 26 6 2.1217 -8.9477 0.3649 27 6 1.5236 -3.2575 -0.7142 28 6 1.9349 -2.1577 -1.4623 29 1 -0.3933 0.4416 0.7650 30 1 1.7923 -0.5139 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5615 2.4679 -1.2085 33 1 2.5965 0.9237 -2.4624 34 1 3.1923 -0.9277 -4.1062 35 1 3.0618 -3.7832 -4.2311 36 1 2.3424 -5.7058 -2.9193 37 1 1.7690 -7.0708 -1.8521 38 1 -0.0770 -10.0381 -0.5736 39 1 0.2932 -9.0817 -2.0727 40 1 1.1917 -11.3060 1.0627 41 1 1.5250 -13.7273 1.3596 42 1 2.8269 -15.0034 -0.2947 43 1 3.4453 -11.4356 -2.5556 44 1 3.0387 -8.3746 0.5020 45 1 1.8565 -9.5397 1.2408 46 1 1.0931 -3.1192 0.2667 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:24 Heat of formation + Delta-G solvation = 7.639115 kcal Electronic energy + Delta-G solvation = -30940.931310 eV Core-core repulsion = 26484.833407 eV Total energy + Delta-G solvation = -4456.097903 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -49.92469 -42.57402 -41.59546 -40.37948 -38.76207 -37.85882 -37.45097 -34.66361 -33.45645 -32.19417 -31.35875 -30.86155 -30.43473 -26.68932 -26.55907 -26.44935 -24.83986 -23.74504 -23.57240 -22.71225 -21.78217 -20.68265 -20.26040 -19.17937 -18.66718 -18.33662 -18.24103 -17.43347 -17.36151 -17.09372 -17.03840 -16.63058 -16.18367 -16.02855 -15.72339 -15.63406 -15.44176 -15.09728 -15.05270 -14.85541 -14.82863 -14.56683 -14.21442 -14.15727 -13.88978 -13.79620 -13.58108 -13.48702 -13.01696 -12.80027 -12.75246 -12.70774 -12.63119 -12.08178 -11.92537 -11.78085 -11.68820 -11.25931 -11.11218 -10.90293 -10.20386 -10.15639 -9.89949 -9.60653 -9.43823 -8.93171 -4.93092 -0.22962 0.10204 0.16165 0.24429 1.32941 1.34165 1.70856 1.79119 1.93669 1.97005 2.04844 2.57466 2.81419 3.23209 3.44215 3.48482 3.58820 3.65316 3.66800 3.68590 3.75439 3.87907 3.97568 3.98966 4.07585 4.11031 4.15772 4.19138 4.26356 4.33040 4.42417 4.44527 4.48825 4.65118 4.72679 4.78761 4.85571 4.90144 4.93377 4.93743 5.03207 5.11313 5.14369 5.18334 5.18932 5.26705 5.36906 5.38872 5.46595 5.50226 5.64864 5.87243 5.93952 6.41753 6.48519 6.95106 7.16456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.569 6.569 2 C -0.059 4.059 3 Si 0.789 3.211 4 C -0.180 4.180 5 C 0.057 3.943 6 N -0.573 5.573 7 C 0.110 3.890 8 C -0.127 4.127 9 C -0.062 4.062 10 C -0.177 4.177 11 C 0.566 3.434 12 O -0.583 6.583 13 N -0.694 5.694 14 C 0.113 3.887 15 H 0.088 0.912 16 C -0.123 4.123 17 C -0.067 4.067 18 H 0.113 0.887 19 C -0.044 4.044 20 C -0.129 4.129 21 C -0.090 4.090 22 C -0.169 4.169 23 C 0.072 3.928 24 F -0.155 7.155 25 C -0.158 4.158 26 C -0.141 4.141 27 C -0.015 4.015 28 C -0.130 4.130 29 H 0.399 0.601 30 H 0.071 0.929 31 H -0.287 1.287 32 H -0.281 1.281 33 H 0.187 0.813 34 H 0.437 0.563 35 H 0.162 0.838 36 H 0.165 0.835 37 H 0.415 0.585 38 H 0.106 0.894 39 H 0.089 0.911 40 H 0.148 0.852 41 H 0.154 0.846 42 H 0.141 0.859 43 H 0.143 0.857 44 H 0.067 0.933 45 H 0.103 0.897 46 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.090 2.637 -1.865 3.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.168 4.168 3 Si 0.692 3.308 4 C -0.187 4.187 5 C -0.071 4.071 6 N -0.177 5.177 7 C 0.000 4.000 8 C -0.147 4.147 9 C -0.081 4.081 10 C -0.181 4.181 11 C 0.355 3.645 12 O -0.464 6.464 13 N -0.346 5.346 14 C 0.008 3.992 15 H 0.106 0.894 16 C -0.161 4.161 17 C -0.086 4.086 18 H 0.131 0.869 19 C -0.044 4.044 20 C -0.147 4.147 21 C -0.107 4.107 22 C -0.188 4.188 23 C 0.053 3.947 24 F -0.134 7.134 25 C -0.177 4.177 26 C -0.179 4.179 27 C -0.034 4.034 28 C -0.134 4.134 29 H 0.249 0.751 30 H 0.089 0.911 31 H -0.214 1.214 32 H -0.208 1.208 33 H 0.204 0.796 34 H 0.278 0.722 35 H 0.180 0.820 36 H 0.182 0.818 37 H 0.253 0.747 38 H 0.124 0.876 39 H 0.107 0.893 40 H 0.166 0.834 41 H 0.172 0.828 42 H 0.159 0.841 43 H 0.161 0.839 44 H 0.086 0.914 45 H 0.121 0.879 46 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.393 3.026 -2.229 4.008 hybrid contribution 0.616 -0.770 -0.976 1.387 sum 2.010 2.256 -3.205 4.404 Atomic orbital electron populations 1.86476 1.17972 1.82541 1.50885 1.24406 0.85256 1.11484 0.95605 0.93766 0.77286 0.74043 0.85698 1.20109 1.09155 0.91578 0.97826 1.21876 1.01062 0.94984 0.89135 1.41691 1.54473 1.03359 1.18192 1.18730 0.99833 0.87707 0.93706 1.20073 1.04657 0.87716 1.02265 1.20930 0.95421 1.00160 0.91632 1.19596 1.08801 0.92285 0.97421 1.18356 0.77166 0.83828 0.85143 1.90764 1.46649 1.86712 1.22232 1.45419 1.63553 1.04290 1.21367 1.21891 0.97596 0.84638 0.95106 0.89413 1.23389 0.95675 0.95514 1.01495 1.21637 0.98175 0.89514 0.99231 0.86910 1.19689 0.95411 0.95712 0.93585 1.21405 1.00494 0.94713 0.98096 1.21330 0.96430 0.94263 0.98710 1.21415 1.00848 1.01898 0.94610 1.18060 0.96357 0.90889 0.89359 1.91475 1.76382 1.79349 1.66155 1.21223 1.02308 0.92090 1.02065 1.23577 0.98964 0.97752 0.97648 1.20620 0.93898 0.90356 0.98567 1.19170 1.05477 0.93183 0.95601 0.75062 0.91106 1.21389 1.20802 0.79610 0.72156 0.82035 0.81773 0.74680 0.87583 0.89269 0.83388 0.82813 0.84103 0.83889 0.91385 0.87874 0.86492 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.32 12.86 -148.98 -1.92 -4.23 16 2 C -0.06 -0.17 3.05 71.24 0.22 0.05 16 3 Si 0.79 -2.00 30.80 68.60 2.11 0.11 16 4 C -0.18 -1.26 5.61 -18.61 -0.10 -1.36 16 5 C 0.06 0.14 10.43 82.98 0.87 1.01 16 6 N -0.57 0.25 6.05 -187.48 -1.13 -0.88 16 7 C 0.11 0.39 7.27 39.19 0.28 0.67 16 8 C -0.13 0.19 10.00 22.09 0.22 0.41 16 9 C -0.06 0.08 9.46 22.30 0.21 0.29 16 10 C -0.18 -1.06 5.87 -20.09 -0.12 -1.18 16 11 C 0.57 4.33 7.76 86.73 0.67 5.00 16 12 O -0.58 -9.59 15.93 -3.97 -0.06 -9.65 16 13 N -0.69 0.46 5.21 -443.09 -2.31 -1.85 16 14 C 0.11 -0.14 4.32 45.52 0.20 0.06 16 15 H 0.09 0.30 7.46 -2.39 -0.02 0.28 16 16 C -0.12 0.71 7.29 31.12 0.23 0.94 16 17 C -0.07 0.36 3.86 -11.02 -0.04 0.32 16 18 H 0.11 -0.88 8.09 -2.38 -0.02 -0.90 16 19 C -0.04 0.09 5.29 -19.87 -0.11 -0.02 16 20 C -0.13 0.36 8.62 22.27 0.19 0.55 16 21 C -0.09 0.17 10.04 22.26 0.22 0.40 16 22 C -0.17 -0.23 10.03 22.31 0.22 -0.01 16 23 C 0.07 0.30 7.30 22.38 0.16 0.46 16 24 F -0.15 -1.18 17.27 44.97 0.78 -0.41 16 25 C -0.16 -0.13 9.69 22.31 0.22 0.09 16 26 C -0.14 0.42 7.25 31.12 0.23 0.64 16 27 C -0.01 -0.15 9.64 22.73 0.22 0.07 16 28 C -0.13 -1.15 6.34 -20.21 -0.13 -1.28 16 29 H 0.40 -2.63 8.74 -74.06 -0.65 -3.28 16 30 H 0.07 0.13 7.96 -2.39 -0.02 0.12 16 31 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 32 H -0.28 -0.56 7.04 99.48 0.70 0.14 16 33 H 0.19 -0.36 6.30 -2.91 -0.02 -0.38 16 34 H 0.44 -3.40 8.96 -92.71 -0.83 -4.23 16 35 H 0.16 -1.35 8.06 -2.91 -0.02 -1.38 16 36 H 0.16 -1.56 6.36 -2.91 -0.02 -1.57 16 37 H 0.41 -2.99 6.70 -92.71 -0.62 -3.61 16 38 H 0.11 -0.68 7.73 -2.39 -0.02 -0.70 16 39 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 40 H 0.15 -0.97 6.64 -2.91 -0.02 -0.99 16 41 H 0.15 -1.01 8.06 -2.91 -0.02 -1.03 16 42 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 43 H 0.14 -0.29 8.05 -2.91 -0.02 -0.32 16 44 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 45 H 0.10 -0.42 6.29 -2.39 -0.02 -0.44 16 46 H 0.12 1.56 7.64 -2.91 -0.02 1.53 16 Total: 0.00 -27.77 388.81 0.34 -27.44 By element: Atomic # 1 Polarization: -16.64 SS G_CDS: -0.99 Total: -17.63 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: 3.86 Total: 7.11 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -3.44 Total: -2.74 kcal Atomic # 8 Polarization: -11.90 SS G_CDS: -1.98 Total: -13.88 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 0.78 Total: -0.41 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: 2.11 Total: 0.11 kcal Total: -27.77 0.34 -27.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.077 kcal (2) G-P(sol) polarization free energy of solvation -27.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.438 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds