Wall clock time and date at job start Mon Mar 8 2021 02:13:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46753 * 2 1 4 4 C 1.50703 * 109.47101 * 119.99274 * 2 1 3 5 5 C 1.38550 * 120.32691 * 245.00039 * 4 2 1 6 6 N 1.31524 * 120.90525 * 179.97438 * 5 4 2 7 7 C 1.32721 * 121.64041 * 359.97438 * 6 5 4 8 8 C 1.48166 * 119.72405 * 179.97438 * 7 6 5 9 9 O 1.21513 * 120.00354 * 179.97438 * 8 7 6 10 10 N 1.34782 * 120.00055 * 359.97438 * 8 7 6 11 11 C 1.46494 * 120.00002 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.85159 * 23.80350 * 11 10 8 13 13 C 1.53780 * 113.61492 * 155.00271 * 11 10 8 14 14 C 1.53785 * 87.08501 * 89.11233 * 13 11 10 15 15 H 1.09003 * 113.61075 * 270.88420 * 14 13 11 16 16 C 1.50698 * 113.61334 * 139.98173 * 14 13 11 17 17 C 1.38225 * 119.98784 * 299.72797 * 16 14 13 18 18 C 1.38269 * 120.05151 * 179.72990 * 17 16 14 19 19 C 1.38179 * 120.02242 * 0.54381 * 18 17 16 20 20 C 1.38478 * 119.97703 * 359.72801 * 19 18 17 21 21 F 1.35097 * 120.02849 * 179.97438 * 20 19 18 22 22 C 1.38219 * 119.98511 * 120.00412 * 16 14 13 23 23 C 1.53778 * 87.07804 * 25.43413 * 14 13 11 24 24 C 1.39306 * 120.55504 * 359.97438 * 7 6 5 25 25 C 1.38590 * 119.05939 * 0.02562 * 24 7 6 26 26 H 0.96696 * 114.00104 * 300.00173 * 1 2 3 27 27 H 1.08994 * 109.47164 * 239.99634 * 2 1 3 28 28 H 1.48495 * 109.99817 * 299.99677 * 3 2 1 29 29 H 1.48494 * 110.00192 * 61.31650 * 3 2 1 30 30 H 1.07999 * 119.55165 * 359.97438 * 5 4 2 31 31 H 0.96999 * 119.99316 * 0.02562 * 10 8 7 32 32 H 1.08996 * 113.61938 * 203.66746 * 13 11 10 33 33 H 1.09009 * 113.61351 * 334.48347 * 13 11 10 34 34 H 1.07997 * 119.97305 * 0.02562 * 17 16 14 35 35 H 1.07997 * 119.98553 * 180.27658 * 18 17 16 36 36 H 1.08000 * 120.01271 * 179.71011 * 19 18 17 37 37 H 1.07997 * 120.01591 * 359.97438 * 22 16 14 38 38 H 1.08995 * 113.61356 * 220.01993 * 23 14 13 39 39 H 1.09005 * 113.61788 * 89.11440 * 23 14 13 40 40 H 1.07997 * 120.47584 * 179.97438 * 24 7 6 41 41 H 1.07997 * 120.76100 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6411 -0.0170 2.1977 6 7 3.0843 -0.6254 3.2763 7 6 2.8719 -1.9191 3.4829 8 6 3.3911 -2.5616 4.7129 9 8 3.1991 -3.7456 4.9074 10 7 4.0762 -1.8328 5.6162 11 6 4.5900 -2.4682 6.8321 12 1 4.7312 -3.5432 6.7206 13 6 5.8055 -1.7467 7.4377 14 6 4.8039 -0.8992 8.2398 15 1 4.4802 0.0025 7.7199 16 6 5.2372 -0.6346 9.6587 17 6 5.4476 -1.6908 10.5251 18 6 5.8506 -1.4499 11.8257 19 6 6.0326 -0.1521 12.2639 20 6 5.8166 0.9071 11.3984 21 9 5.9937 2.1764 11.8258 22 6 5.4185 0.6644 10.0948 23 6 3.8215 -2.0745 8.1047 24 6 2.1649 -2.6781 2.5529 25 6 1.6860 -2.0633 1.4069 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 1.5614 2.4678 -1.2085 29 1 1.5878 2.4586 1.2241 30 1 2.8330 1.0373 2.0642 31 1 4.2291 -0.8876 5.4611 32 1 6.4298 -2.3890 8.0588 33 1 6.3802 -1.1735 6.7101 34 1 5.3017 -2.7053 10.1846 35 1 6.0190 -2.2761 12.5004 36 1 6.3428 0.0361 13.2811 37 1 5.2502 1.4897 9.4188 38 1 2.7937 -1.7649 7.9158 39 1 3.9033 -2.8066 8.9082 40 1 1.9932 -3.7308 2.7221 41 1 1.1349 -2.6255 0.6676 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:29 Heat of formation + Delta-G solvation = -17.344189 kcal Electronic energy + Delta-G solvation = -26222.807610 eV Core-core repulsion = 22177.616250 eV Total energy + Delta-G solvation = -4045.191361 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.121 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -49.79402 -42.02611 -41.34505 -40.04493 -38.69960 -38.06783 -34.79518 -33.71496 -33.02655 -32.09928 -31.23482 -28.08480 -26.84142 -26.31959 -25.11241 -24.12432 -23.74648 -22.76129 -22.00245 -20.31726 -19.36450 -18.80571 -18.34917 -17.81120 -17.35705 -17.10120 -16.86700 -16.72905 -16.52720 -16.48843 -16.23559 -16.14480 -15.64432 -15.50273 -14.98465 -14.67710 -14.58638 -14.46456 -14.30767 -14.10130 -13.85354 -13.62811 -13.54824 -13.00963 -12.87449 -12.79670 -12.74949 -12.17895 -11.88609 -11.79132 -11.40195 -11.31486 -11.14110 -10.82053 -10.69105 -10.40451 -10.10176 -9.93801 -9.61641 -5.13466 -0.62529 0.00783 0.14393 0.20578 1.05340 1.41375 1.57327 1.80805 1.91036 2.53100 2.63976 2.88151 3.13766 3.22088 3.32342 3.37683 3.55182 3.57067 3.62193 3.67936 3.76678 3.86239 3.86817 4.00885 4.05893 4.08154 4.16448 4.30477 4.36899 4.48761 4.53458 4.60918 4.68910 4.78467 4.81617 4.85241 4.90117 4.91582 5.02401 5.06497 5.14450 5.30245 5.32125 5.42914 5.54999 5.89877 6.16951 6.27590 6.57649 7.08803 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.074 4.074 3 Si 0.687 3.313 4 C -0.148 4.148 5 C 0.102 3.898 6 N -0.453 5.453 7 C 0.081 3.919 8 C 0.576 3.424 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.117 3.883 12 H 0.109 0.891 13 C -0.134 4.134 14 C -0.076 4.076 15 H 0.101 0.899 16 C -0.042 4.042 17 C -0.128 4.128 18 C -0.086 4.086 19 C -0.159 4.159 20 C 0.101 3.899 21 F -0.140 7.140 22 C -0.151 4.151 23 C -0.143 4.143 24 C -0.108 4.108 25 C -0.052 4.052 26 H 0.378 0.622 27 H 0.125 0.875 28 H -0.251 1.251 29 H -0.255 1.255 30 H 0.165 0.835 31 H 0.413 0.587 32 H 0.101 0.899 33 H 0.080 0.920 34 H 0.131 0.869 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.134 0.866 38 H 0.076 0.924 39 H 0.098 0.902 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.885 0.504 -1.505 2.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.587 3.413 4 C -0.150 4.150 5 C -0.058 4.058 6 N -0.164 5.164 7 C -0.057 4.057 8 C 0.361 3.639 9 O -0.401 6.401 10 N -0.345 5.345 11 C 0.012 3.988 12 H 0.127 0.873 13 C -0.172 4.172 14 C -0.094 4.094 15 H 0.119 0.881 16 C -0.042 4.042 17 C -0.146 4.146 18 C -0.104 4.104 19 C -0.178 4.178 20 C 0.082 3.918 21 F -0.118 7.118 22 C -0.170 4.170 23 C -0.181 4.181 24 C -0.128 4.128 25 C -0.078 4.078 26 H 0.226 0.774 27 H 0.143 0.857 28 H -0.176 1.176 29 H -0.180 1.180 30 H 0.181 0.819 31 H 0.249 0.751 32 H 0.119 0.881 33 H 0.099 0.901 34 H 0.149 0.851 35 H 0.152 0.848 36 H 0.153 0.847 37 H 0.152 0.848 38 H 0.095 0.905 39 H 0.117 0.883 40 H 0.171 0.829 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.113 0.668 -1.234 2.536 hybrid contribution -1.445 0.193 -0.013 1.458 sum 0.667 0.861 -1.247 1.656 Atomic orbital electron populations 1.86643 1.17172 1.79968 1.49391 1.25020 0.84289 1.11360 0.97758 0.94978 0.91403 0.73977 0.80958 1.21589 0.99487 0.95762 0.98175 1.22676 0.94180 1.00047 0.88856 1.67529 1.18248 1.09422 1.21227 1.21145 0.98567 0.90307 0.95729 1.17843 0.78061 0.85906 0.82099 1.90822 1.57525 1.14832 1.76929 1.45492 1.55095 1.13828 1.20074 1.21914 0.94456 0.98930 0.83520 0.87310 1.23427 0.96055 0.98655 0.99037 1.21650 0.97370 0.98628 0.91792 0.88062 1.19523 0.97251 0.92077 0.95340 1.21106 1.00704 0.99314 0.93526 1.21043 0.97311 0.96106 0.95987 1.21212 1.03792 0.92282 1.00466 1.17739 1.01524 0.79063 0.93503 1.91521 1.92949 1.37066 1.90271 1.21063 1.03293 0.97966 0.94677 1.23582 0.99141 0.97538 0.97881 1.22231 0.95310 1.02328 0.92953 1.21575 0.95771 0.93745 0.96723 0.77424 0.85700 1.17571 1.17954 0.81869 0.75081 0.88050 0.90121 0.85101 0.84817 0.84714 0.84774 0.90508 0.88330 0.82929 0.83432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.35 12.84 -35.23 -0.45 -0.11 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -1.98 29.91 -169.99 -5.08 -7.07 16 4 C -0.15 0.23 5.37 -104.36 -0.56 -0.33 16 5 C 0.10 -0.13 9.84 -17.57 -0.17 -0.30 16 6 N -0.45 -0.15 9.54 -9.80 -0.09 -0.25 16 7 C 0.08 0.10 6.75 -83.01 -0.56 -0.46 16 8 C 0.58 1.27 7.81 -12.18 -0.10 1.18 16 9 O -0.53 -2.69 15.92 5.35 0.09 -2.60 16 10 N -0.69 0.14 5.25 -53.86 -0.28 -0.14 16 11 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 12 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 13 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 14 C -0.08 0.15 3.86 -90.96 -0.35 -0.20 16 15 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 16 C -0.04 0.02 5.29 -104.63 -0.55 -0.53 16 17 C -0.13 0.13 8.62 -39.57 -0.34 -0.21 16 18 C -0.09 0.06 10.04 -39.59 -0.40 -0.33 16 19 C -0.16 -0.08 10.03 -39.51 -0.40 -0.48 16 20 C 0.10 0.18 7.30 -39.42 -0.29 -0.11 16 21 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 22 C -0.15 -0.09 9.69 -39.51 -0.38 -0.47 16 23 C -0.14 0.22 7.25 -25.92 -0.19 0.03 16 24 C -0.11 -0.04 9.63 -39.05 -0.38 -0.41 16 25 C -0.05 0.05 9.83 -39.31 -0.39 -0.33 16 26 H 0.38 -1.27 8.70 45.56 0.40 -0.88 16 27 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 28 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 29 H -0.25 0.29 7.01 56.52 0.40 0.69 16 30 H 0.16 -0.55 4.86 -52.49 -0.25 -0.80 16 31 H 0.41 -0.62 8.03 -40.82 -0.33 -0.95 16 32 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 33 H 0.08 -0.21 8.14 -51.92 -0.42 -0.64 16 34 H 0.13 -0.37 6.64 -52.49 -0.35 -0.71 16 35 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 36 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 38 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.10 -0.22 6.30 -51.93 -0.33 -0.54 16 40 H 0.15 0.00 7.64 -52.49 -0.40 -0.40 16 41 H 0.15 -0.35 8.06 -52.49 -0.42 -0.78 16 LS Contribution 352.52 15.07 5.31 5.31 Total: 0.00 -7.28 352.52 -10.53 -17.80 By element: Atomic # 1 Polarization: -4.97 SS G_CDS: -4.63 Total: -9.59 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: -5.43 Total: -2.95 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -0.38 Total: -0.38 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -0.37 Total: -2.71 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.08 Total: -7.07 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -7.28 -10.53 -17.80 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.459 kcal (2) G-P(sol) polarization free energy of solvation -7.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds