Wall clock time and date at job start Mon Mar 8 2021 02:13:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36414 * 125.80705 * 2 1 4 4 C 1.47380 * 127.18842 * 0.02562 * 3 2 1 5 5 O 1.21613 * 120.00134 * 359.97438 * 4 3 2 6 6 N 1.34777 * 119.99615 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72401 * 6 4 3 8 8 H 1.09002 * 112.85201 * 24.08188 * 7 6 4 9 9 C 1.53784 * 113.61491 * 155.28109 * 7 6 4 10 10 C 1.53777 * 87.08172 * 89.11442 * 9 7 6 11 11 H 1.08996 * 113.61378 * 270.80012 * 10 9 7 12 12 C 1.50705 * 113.61003 * 139.98274 * 10 9 7 13 13 C 1.38174 * 119.98900 * 299.72120 * 12 10 9 14 14 C 1.38476 * 119.97620 * 179.72895 * 13 12 10 15 15 F 1.35096 * 120.03079 * 180.25374 * 14 13 12 16 16 C 1.38447 * 119.94591 * 0.54888 * 14 13 12 17 17 C 1.38218 * 119.97227 * 359.72648 * 16 14 13 18 18 C 1.38223 * 120.02900 * 0.02562 * 17 16 14 19 19 C 1.53777 * 87.08146 * 25.43581 * 10 9 7 20 20 C 1.47017 * 105.61723 * 180.26361 * 3 2 1 21 21 C 1.34183 * 105.95593 * 359.57333 * 20 3 2 22 22 C 1.50695 * 125.44032 * 180.14618 * 21 20 3 23 23 O 1.42898 * 109.47283 * 300.31160 * 22 21 20 24 24 Si 1.86303 * 109.47133 * 180.31090 * 22 21 20 25 25 O 1.33658 * 125.79507 * 180.02562 * 2 1 3 26 26 H 1.09000 * 109.47435 * 89.99243 * 1 2 3 27 27 H 1.08997 * 109.47210 * 209.99983 * 1 2 3 28 28 H 1.09007 * 109.46743 * 329.99905 * 1 2 3 29 29 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 30 30 H 1.08999 * 113.61037 * 203.66621 * 9 7 6 31 31 H 1.09001 * 113.61313 * 334.56329 * 9 7 6 32 32 H 1.07998 * 120.01144 * 0.02562 * 13 12 10 33 33 H 1.08001 * 120.01073 * 179.74803 * 16 14 13 34 34 H 1.08002 * 119.98152 * 180.02562 * 17 16 14 35 35 H 1.07998 * 119.97693 * 180.02562 * 18 17 16 36 36 H 1.08999 * 113.61239 * 220.01646 * 19 10 9 37 37 H 1.08999 * 113.61926 * 89.11880 * 19 10 9 38 38 H 1.08003 * 127.02169 * 179.73831 * 20 3 2 39 39 H 1.09002 * 109.47395 * 60.30974 * 22 21 20 40 40 H 0.96701 * 113.99838 * 300.00374 * 23 22 21 41 41 H 1.48498 * 109.99984 * 179.97438 * 24 22 21 42 42 H 1.48495 * 109.99788 * 301.31752 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1063 0.0000 4 6 1.8741 2.5157 0.0005 5 8 0.6891 2.7892 0.0006 6 7 2.7932 3.5014 0.0010 7 6 2.3648 4.9023 -0.0046 8 1 1.3626 5.0401 0.4013 9 6 3.4065 5.8674 0.5856 10 6 3.9872 5.9838 -0.8336 11 1 4.7505 5.2380 -1.0556 12 6 4.4120 7.3828 -1.1991 13 6 3.4844 8.4068 -1.2053 14 6 3.8762 9.6932 -1.5358 15 9 2.9712 10.6963 -1.5372 16 6 5.1948 9.9496 -1.8707 17 6 6.1198 8.9225 -1.8693 18 6 5.7286 7.6398 -1.5343 19 6 2.5885 5.6096 -1.3517 20 6 3.6849 0.5989 -0.0065 21 6 3.5859 -0.7392 -0.0001 22 6 4.7458 -1.7013 -0.0002 23 8 5.5421 -1.4873 -1.1672 24 14 4.1024 -3.4497 0.0005 25 8 2.2887 -1.0841 -0.0005 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5139 29 1 3.7384 3.2833 0.0006 30 1 2.9778 6.7972 0.9595 31 1 4.0843 5.3963 1.2974 32 1 2.4551 8.2049 -0.9479 33 1 5.5007 10.9517 -2.1325 34 1 7.1486 9.1223 -2.1301 35 1 6.4521 6.8380 -1.5331 36 1 2.6059 4.9303 -2.2039 37 1 1.9362 6.4688 -1.5074 38 1 4.5928 1.1838 -0.0123 39 1 5.3538 -1.5375 0.8896 40 1 5.0646 -1.6159 -1.9982 41 1 5.2366 -4.4082 -0.0001 42 1 3.2467 -3.6755 1.1930 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:13:52 Heat of formation + Delta-G solvation = -44.343934 kcal Electronic energy + Delta-G solvation = -27281.110741 eV Core-core repulsion = 23109.718443 eV Total energy + Delta-G solvation = -4171.392298 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.126 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -49.80169 -43.76625 -41.57330 -40.11543 -38.66898 -38.12582 -34.74046 -33.97613 -33.10788 -31.83093 -31.51642 -29.44824 -26.84920 -26.77766 -25.71696 -24.38685 -23.68123 -22.83539 -22.20389 -20.82909 -20.16016 -19.04064 -18.56625 -17.92845 -17.68458 -17.31180 -17.07672 -16.97880 -16.75904 -16.51382 -16.07343 -15.91479 -15.81599 -15.38200 -15.21799 -14.85799 -14.64444 -14.28377 -14.20963 -14.12236 -14.03984 -13.88895 -13.85783 -13.59788 -13.02795 -12.98791 -12.93594 -12.85360 -12.51031 -12.18225 -12.07711 -11.79831 -11.30902 -11.03155 -10.90479 -10.68726 -10.13054 -9.92813 -9.63966 -9.57670 -5.10587 0.13764 0.18743 0.27921 0.80700 1.07993 1.37526 1.71418 1.86686 2.09052 2.31659 2.52372 3.10998 3.19108 3.33799 3.37617 3.52598 3.57419 3.69924 3.74284 3.75466 3.84197 4.00578 4.08986 4.09613 4.16493 4.19311 4.34723 4.37986 4.52491 4.53279 4.60384 4.61378 4.71387 4.75831 4.80625 4.84141 4.90822 5.02120 5.04758 5.10036 5.13566 5.19184 5.30490 5.45281 5.56020 5.88745 5.88797 6.29713 6.46155 7.20934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.596 3.404 5 O -0.537 6.537 6 N -0.707 5.707 7 C 0.121 3.879 8 H 0.108 0.892 9 C -0.136 4.136 10 C -0.075 4.075 11 H 0.102 0.898 12 C -0.042 4.042 13 C -0.153 4.153 14 C 0.102 3.898 15 F -0.139 7.139 16 C -0.159 4.159 17 C -0.087 4.087 18 C -0.127 4.127 19 C -0.144 4.144 20 C -0.149 4.149 21 C -0.056 4.056 22 C -0.028 4.028 23 O -0.530 6.530 24 Si 0.703 3.297 25 O -0.168 6.168 26 H 0.094 0.906 27 H 0.081 0.919 28 H 0.111 0.889 29 H 0.401 0.599 30 H 0.100 0.900 31 H 0.079 0.921 32 H 0.136 0.864 33 H 0.135 0.865 34 H 0.134 0.866 35 H 0.129 0.871 36 H 0.077 0.923 37 H 0.096 0.904 38 H 0.158 0.842 39 H 0.133 0.867 40 H 0.384 0.616 41 H -0.246 1.246 42 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.457 -2.348 -1.378 3.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.258 4.258 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.358 5.358 7 C 0.016 3.984 8 H 0.126 0.874 9 C -0.174 4.174 10 C -0.093 4.093 11 H 0.120 0.880 12 C -0.043 4.043 13 C -0.171 4.171 14 C 0.083 3.917 15 F -0.117 7.117 16 C -0.177 4.177 17 C -0.105 4.105 18 C -0.145 4.145 19 C -0.183 4.183 20 C -0.168 4.168 21 C -0.104 4.104 22 C -0.138 4.138 23 O -0.336 6.336 24 Si 0.603 3.397 25 O -0.065 6.065 26 H 0.112 0.888 27 H 0.100 0.900 28 H 0.129 0.871 29 H 0.236 0.764 30 H 0.118 0.882 31 H 0.097 0.903 32 H 0.154 0.846 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.147 0.853 36 H 0.096 0.904 37 H 0.115 0.885 38 H 0.175 0.825 39 H 0.150 0.850 40 H 0.232 0.768 41 H -0.171 1.171 42 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 1.914 -3.061 -0.493 3.643 hybrid contribution 0.768 0.993 0.231 1.276 sum 2.682 -2.068 -0.262 3.397 Atomic orbital electron populations 1.20711 0.83291 1.05456 1.04856 1.22928 0.94089 0.82830 0.95809 1.21089 0.93253 0.93708 1.17799 1.17153 0.85370 0.83655 0.75313 1.90783 1.16500 1.83945 1.50258 1.45431 1.09670 1.05077 1.75606 1.21842 0.99800 0.79838 0.96941 0.87396 1.23438 0.97985 1.00064 0.95871 1.21642 0.97570 0.93181 0.96941 0.88026 1.19523 0.92978 0.94528 0.97223 1.20996 1.01148 0.91096 1.03883 1.17712 0.87078 0.85077 1.01859 1.91524 1.66597 1.59528 1.94099 1.21218 0.91859 1.01198 1.03475 1.21051 0.99594 0.92182 0.97691 1.21150 0.95642 0.97234 1.00491 1.23585 0.95701 1.00971 0.98019 1.22562 0.96416 0.93510 1.04311 1.22620 0.82941 0.95634 1.09216 1.24402 0.89757 1.07530 0.92117 1.86559 1.38252 1.93404 1.15367 0.94181 0.82131 0.74081 0.89346 1.83682 1.16354 1.35029 1.71417 0.88800 0.89984 0.87104 0.76381 0.88188 0.90278 0.84588 0.84695 0.84854 0.85326 0.90443 0.88526 0.82468 0.84992 0.76768 1.17065 1.17693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 36.00 0.36 0.40 16 2 C 0.10 0.12 7.37 -34.97 -0.26 -0.14 16 3 C -0.25 -0.36 6.31 -103.28 -0.65 -1.01 16 4 C 0.60 1.33 7.81 -12.54 -0.10 1.24 16 5 O -0.54 -2.71 14.45 5.27 0.08 -2.64 16 6 N -0.71 0.37 5.26 -54.10 -0.28 0.08 16 7 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 8 H 0.11 0.09 7.47 -51.93 -0.39 -0.30 16 9 C -0.14 0.30 7.29 -25.92 -0.19 0.11 16 10 C -0.08 0.16 3.86 -90.96 -0.35 -0.19 16 11 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 12 C -0.04 0.03 5.29 -104.63 -0.55 -0.53 16 13 C -0.15 -0.06 8.60 -39.52 -0.34 -0.40 16 14 C 0.10 0.18 7.30 -39.42 -0.29 -0.11 16 15 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 16 C -0.16 -0.09 10.03 -39.51 -0.40 -0.48 16 17 C -0.09 0.06 10.04 -39.59 -0.40 -0.34 16 18 C -0.13 0.11 9.71 -39.58 -0.38 -0.27 16 19 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 20 C -0.15 0.02 10.46 -37.45 -0.39 -0.37 16 21 C -0.06 0.01 6.20 -35.74 -0.22 -0.22 16 22 C -0.03 0.04 2.97 36.00 0.11 0.15 16 23 O -0.53 0.81 12.86 -35.23 -0.45 0.36 16 24 Si 0.70 -1.13 32.09 -169.99 -5.45 -6.58 16 25 O -0.17 -0.13 8.89 7.62 0.07 -0.06 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.11 0.10 6.48 -51.93 -0.34 -0.24 16 29 H 0.40 -1.06 7.87 -40.82 -0.32 -1.38 16 30 H 0.10 -0.21 7.73 -51.93 -0.40 -0.62 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.14 -0.09 6.64 -52.49 -0.35 -0.44 16 33 H 0.14 -0.10 8.06 -52.49 -0.42 -0.52 16 34 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 35 H 0.13 -0.35 8.05 -52.49 -0.42 -0.77 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 37 H 0.10 -0.13 6.30 -51.93 -0.33 -0.45 16 38 H 0.16 -0.34 7.74 -52.48 -0.41 -0.74 16 39 H 0.13 -0.25 7.96 -51.93 -0.41 -0.66 16 40 H 0.38 -1.97 8.70 45.56 0.40 -1.57 16 41 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 42 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 LS Contribution 361.46 15.07 5.45 5.45 Total: 0.00 -7.40 361.46 -10.22 -17.63 By element: Atomic # 1 Polarization: -6.13 SS G_CDS: -5.12 Total: -11.25 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -4.54 Total: -2.58 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -0.28 Total: 0.08 kcal Atomic # 8 Polarization: -2.03 SS G_CDS: -0.31 Total: -2.34 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.45 Total: -6.58 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -7.40 -10.22 -17.63 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.719 kcal (2) G-P(sol) polarization free energy of solvation -7.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.124 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.220 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds