Wall clock time and date at job start Mon Mar 8 2021 02:14:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47081 * 2 1 4 4 C 1.50704 * 109.47146 * 120.00202 * 2 1 3 5 5 C 1.38054 * 119.80552 * 64.99531 * 4 2 1 6 6 C 1.38705 * 120.08377 * 179.97438 * 5 4 2 7 7 O 1.35650 * 120.15288 * 180.02562 * 6 5 4 8 8 C 1.40142 * 119.69886 * 0.02562 * 6 5 4 9 9 C 1.47537 * 120.19008 * 179.97438 * 8 6 5 10 10 O 1.21591 * 120.00221 * 0.02562 * 9 8 6 11 11 N 1.34778 * 119.99814 * 180.02562 * 9 8 6 12 12 C 1.46503 * 119.99976 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.84685 * 23.80950 * 12 11 9 14 14 C 1.53787 * 113.61260 * 154.99804 * 12 11 9 15 15 C 1.53780 * 87.07609 * 89.20438 * 14 12 11 16 16 H 1.08998 * 113.61197 * 270.79655 * 15 14 12 17 17 C 1.50697 * 113.61342 * 139.98186 * 15 14 12 18 18 C 1.38226 * 119.98845 * 300.01883 * 17 15 14 19 19 C 1.38263 * 120.05409 * 180.02562 * 18 17 15 20 20 C 1.38176 * 120.02823 * 359.97438 * 19 18 17 21 21 C 1.38485 * 119.97176 * 359.97438 * 20 19 18 22 22 F 1.35093 * 120.02684 * 180.29646 * 21 20 19 23 23 C 1.38218 * 119.98911 * 119.99444 * 17 15 14 24 24 C 1.53775 * 113.69204 * 252.53723 * 12 11 9 25 25 C 1.39706 * 119.61585 * 0.25262 * 8 6 5 26 26 C 1.37792 * 119.90647 * 359.46701 * 25 8 6 27 27 H 0.96691 * 114.00222 * 299.99927 * 1 2 3 28 28 H 1.09004 * 109.46851 * 239.99766 * 2 1 3 29 29 H 1.48502 * 109.99726 * 299.99864 * 3 2 1 30 30 H 1.48499 * 110.00170 * 61.31660 * 3 2 1 31 31 H 1.07994 * 119.96010 * 0.02955 * 5 4 2 32 32 H 0.96709 * 114.00071 * 269.98237 * 7 6 5 33 33 H 0.96996 * 120.00364 * 0.02562 * 11 9 8 34 34 H 1.08991 * 113.61463 * 334.65576 * 14 12 11 35 35 H 1.09004 * 113.68863 * 203.76258 * 14 12 11 36 36 H 1.08006 * 119.96980 * 359.97438 * 18 17 15 37 37 H 1.08006 * 119.98949 * 180.02562 * 19 18 17 38 38 H 1.08000 * 120.01900 * 180.02562 * 20 19 18 39 39 H 1.08001 * 120.01729 * 359.97438 * 23 17 15 40 40 H 1.09002 * 113.61295 * 156.32921 * 24 12 11 41 41 H 1.09000 * 113.61501 * 25.41866 * 24 12 11 42 42 H 1.08007 * 120.04385 * 179.72351 * 25 8 6 43 43 H 1.08005 * 119.84760 * 180.27721 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6827 -2.0585 1.3941 6 6 2.1428 -2.7183 2.5241 7 8 1.8997 -4.0430 2.6860 8 6 2.8600 -2.0101 3.4978 9 6 3.3540 -2.7010 4.7042 10 8 3.1396 -3.8882 4.8556 11 7 4.0428 -2.0160 5.6384 12 6 4.5329 -2.7019 6.8367 13 1 4.6561 -3.7748 6.6896 14 6 5.7550 -2.0237 7.4782 15 6 4.7606 -1.1878 8.3010 16 1 4.4584 -0.2621 7.8113 17 6 5.1849 -0.9813 9.7322 18 6 5.3749 -2.0713 10.5606 19 6 5.7637 -1.8833 11.8741 20 6 5.9634 -0.6053 12.3600 21 6 5.7745 0.4875 11.5306 22 9 5.9752 1.7372 12.0028 23 6 5.3846 0.2981 10.2158 24 6 3.7593 -2.3402 8.1155 25 6 3.0994 -0.6450 3.3222 26 6 2.6399 -0.0068 2.1907 27 1 -0.3933 0.4416 0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5614 2.4678 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 1.1300 -2.6003 0.6409 32 1 1.0745 -4.2375 3.1512 33 1 4.2136 -1.0689 5.5178 34 1 6.3454 -1.4342 6.7768 35 1 6.3632 -2.6975 8.0817 36 1 5.2186 -3.0706 10.1818 37 1 5.9122 -2.7358 12.5204 38 1 6.2675 -0.4587 13.3859 39 1 5.2369 1.1497 9.5682 40 1 3.8210 -3.1015 8.8932 41 1 2.7388 -2.0061 7.9287 42 1 3.6475 -0.0915 4.0704 43 1 2.8294 1.0476 2.0539 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:14:00 Heat of formation + Delta-G solvation = -67.503613 kcal Electronic energy + Delta-G solvation = -28544.184619 eV Core-core repulsion = 24243.561901 eV Total energy + Delta-G solvation = -4300.622718 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.126 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.82951 -41.91938 -41.17031 -39.88444 -38.80671 -38.26401 -37.26012 -34.68885 -32.91260 -32.01779 -31.21573 -31.16075 -27.76800 -26.88201 -26.29468 -24.01998 -23.94450 -23.66763 -22.71359 -21.77318 -20.39808 -19.44146 -18.89375 -18.36320 -18.29821 -17.43104 -17.30202 -17.13112 -16.72330 -16.54031 -16.53297 -16.32799 -16.11431 -15.86579 -15.60649 -15.43790 -15.12677 -14.90002 -14.70286 -14.37575 -14.21590 -13.88494 -13.79207 -13.67914 -13.31300 -13.06125 -12.98639 -12.90107 -12.83150 -12.44304 -12.13585 -11.91426 -11.82790 -11.66502 -11.38932 -10.91988 -10.68741 -10.24443 -10.09206 -9.97619 -9.84826 -9.64963 -5.08120 -0.46286 0.05341 0.10823 0.16945 1.12336 1.46026 1.70541 1.85000 1.95555 2.49017 2.52562 3.03218 3.18184 3.24993 3.28044 3.37434 3.52673 3.53404 3.58496 3.66299 3.73515 3.82913 3.92345 3.96556 4.02195 4.12155 4.15462 4.30797 4.33132 4.49687 4.53024 4.57750 4.63747 4.70112 4.74637 4.81044 4.85848 4.91002 4.96179 5.02856 5.07830 5.10906 5.14770 5.28751 5.40328 5.47670 5.52513 5.86303 6.24698 6.38074 6.66609 7.16311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.691 3.309 4 C -0.073 4.073 5 C -0.128 4.128 6 C 0.174 3.826 7 O -0.476 6.476 8 C -0.164 4.164 9 C 0.562 3.438 10 O -0.515 6.515 11 N -0.712 5.712 12 C 0.121 3.879 13 H 0.108 0.892 14 C -0.135 4.135 15 C -0.076 4.076 16 H 0.099 0.901 17 C -0.043 4.043 18 C -0.128 4.128 19 C -0.086 4.086 20 C -0.158 4.158 21 C 0.101 3.899 22 F -0.139 7.139 23 C -0.152 4.152 24 C -0.143 4.143 25 C -0.065 4.065 26 C -0.137 4.137 27 H 0.377 0.623 28 H 0.123 0.877 29 H -0.255 1.255 30 H -0.258 1.258 31 H 0.141 0.859 32 H 0.398 0.602 33 H 0.399 0.601 34 H 0.079 0.921 35 H 0.101 0.899 36 H 0.131 0.869 37 H 0.134 0.866 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.098 0.902 41 H 0.076 0.924 42 H 0.133 0.867 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.564 2.445 0.569 2.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.074 4.074 5 C -0.147 4.147 6 C 0.127 3.873 7 O -0.287 6.287 8 C -0.168 4.168 9 C 0.349 3.651 10 O -0.390 6.390 11 N -0.364 5.364 12 C 0.016 3.984 13 H 0.126 0.874 14 C -0.173 4.173 15 C -0.094 4.094 16 H 0.117 0.883 17 C -0.043 4.043 18 C -0.146 4.146 19 C -0.104 4.104 20 C -0.177 4.177 21 C 0.082 3.918 22 F -0.118 7.118 23 C -0.170 4.170 24 C -0.182 4.182 25 C -0.084 4.084 26 C -0.155 4.155 27 H 0.225 0.775 28 H 0.141 0.859 29 H -0.180 1.180 30 H -0.183 1.183 31 H 0.158 0.842 32 H 0.257 0.743 33 H 0.235 0.765 34 H 0.097 0.903 35 H 0.119 0.881 36 H 0.149 0.851 37 H 0.152 0.848 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.116 0.884 41 H 0.094 0.906 42 H 0.151 0.849 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.814 2.062 -0.148 2.751 hybrid contribution -1.326 0.686 0.957 1.774 sum 0.488 2.749 0.809 2.907 Atomic orbital electron populations 1.86637 1.17297 1.79974 1.49329 1.25161 0.84266 1.11404 0.98258 0.94861 0.91532 0.73986 0.80446 1.20381 0.96720 0.94115 0.96208 1.21356 1.00955 0.93890 0.98489 1.18505 0.93668 0.83492 0.91649 1.84761 1.46239 1.17932 1.79794 1.20401 1.05665 0.94364 0.96361 1.18039 0.78133 0.86637 0.82255 1.90842 1.56022 1.14528 1.77614 1.45581 1.57056 1.13017 1.20788 1.21838 0.94340 0.98484 0.83783 0.87371 1.23438 0.96108 0.99060 0.98670 1.21642 0.97450 0.98804 0.91518 0.88250 1.19519 0.97318 0.92096 0.95339 1.21108 1.00741 0.99071 0.93704 1.21050 0.97241 0.96478 0.95644 1.21220 1.03747 0.92043 1.00706 1.17739 1.01455 0.79556 0.93074 1.91521 1.92591 1.38899 1.88782 1.21048 1.03412 0.98283 0.94304 1.23581 0.98901 0.97832 0.97842 1.21137 0.97401 0.92540 0.97297 1.20997 0.99906 1.00275 0.94302 0.77539 0.85906 1.17987 1.18296 0.84160 0.74321 0.76502 0.90256 0.88074 0.85099 0.84793 0.84689 0.84823 0.88391 0.90561 0.84895 0.84637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.04 12.83 -35.23 -0.45 -0.41 16 2 C -0.08 0.13 2.79 36.01 0.10 0.23 16 3 Si 0.69 -1.70 29.86 -169.99 -5.08 -6.78 16 4 C -0.07 0.09 5.35 -104.58 -0.56 -0.47 16 5 C -0.13 -0.02 9.60 -39.48 -0.38 -0.39 16 6 C 0.17 0.23 6.72 -38.69 -0.26 -0.03 16 7 O -0.48 -1.11 11.58 -40.53 -0.47 -1.58 16 8 C -0.16 -0.07 5.89 -104.84 -0.62 -0.69 16 9 C 0.56 0.94 7.76 -12.47 -0.10 0.85 16 10 O -0.51 -2.77 14.76 -16.59 -0.24 -3.02 16 11 N -0.71 1.05 5.22 -54.05 -0.28 0.77 16 12 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 13 H 0.11 0.03 7.46 -51.93 -0.39 -0.36 16 14 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 15 C -0.08 0.21 3.86 -90.96 -0.35 -0.14 16 16 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 17 C -0.04 0.05 5.29 -104.64 -0.55 -0.51 16 18 C -0.13 0.17 8.61 -39.58 -0.34 -0.17 16 19 C -0.09 0.09 10.04 -39.59 -0.40 -0.31 16 20 C -0.16 -0.03 10.03 -39.51 -0.40 -0.43 16 21 C 0.10 0.14 7.30 -39.41 -0.29 -0.15 16 22 F -0.14 -0.40 17.27 2.25 0.04 -0.36 16 23 C -0.15 0.00 9.69 -39.51 -0.38 -0.39 16 24 C -0.14 0.30 7.26 -25.92 -0.19 0.12 16 25 C -0.07 0.15 9.54 -39.20 -0.37 -0.23 16 26 C -0.14 0.32 8.64 -39.63 -0.34 -0.02 16 27 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 28 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 29 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 30 H -0.26 0.24 7.00 56.52 0.40 0.64 16 31 H 0.14 -0.02 8.06 -52.49 -0.42 -0.44 16 32 H 0.40 -0.51 9.06 45.56 0.41 -0.09 16 33 H 0.40 -1.64 6.73 -40.82 -0.27 -1.92 16 34 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 35 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 36 H 0.13 -0.40 6.66 -52.48 -0.35 -0.75 16 37 H 0.13 -0.40 8.06 -52.48 -0.42 -0.83 16 38 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.18 8.05 -52.49 -0.42 -0.60 16 40 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.13 -0.70 6.41 -52.48 -0.34 -1.03 16 43 H 0.14 -0.57 4.81 -52.48 -0.25 -0.83 16 LS Contribution 364.03 15.07 5.49 5.49 Total: 0.00 -9.25 364.03 -11.00 -20.25 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -4.09 Total: -11.38 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: -5.91 Total: -2.98 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.28 Total: 0.77 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -1.17 Total: -5.01 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.08 Total: -6.78 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -9.25 -11.00 -20.25 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.253 kcal (2) G-P(sol) polarization free energy of solvation -9.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.250 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.504 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds