Wall clock time and date at job start Mon Mar 8 2021 02:14:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.37868 * 126.46167 * 2 1 4 4 C 1.46678 * 126.23072 * 359.93820 * 3 2 1 5 5 O 1.21700 * 119.99684 * 359.97438 * 4 3 2 6 6 N 1.34772 * 120.00210 * 179.97438 * 4 3 2 7 7 C 1.46506 * 120.00033 * 180.02562 * 6 4 3 8 8 H 1.08992 * 112.90684 * 336.24748 * 7 6 4 9 9 C 1.54049 * 113.61276 * 107.61836 * 7 6 4 10 10 C 1.53781 * 87.08031 * 89.07129 * 9 7 6 11 11 H 1.08999 * 113.61181 * 270.87794 * 10 9 7 12 12 C 1.50698 * 113.61565 * 139.97986 * 10 9 7 13 13 C 1.38179 * 119.98418 * 322.22520 * 12 10 9 14 14 C 1.38482 * 119.97189 * 179.72965 * 13 12 10 15 15 F 1.35099 * 120.02525 * 180.25399 * 14 13 12 16 16 C 1.38434 * 119.94841 * 0.55042 * 14 13 12 17 17 C 1.38220 * 119.97601 * 359.72488 * 16 14 13 18 18 C 1.38226 * 120.02466 * 0.02562 * 17 16 14 19 19 C 1.53781 * 87.08070 * 25.42738 * 10 9 7 20 20 N 1.37645 * 107.53617 * 180.19612 * 3 2 1 21 21 C 1.35529 * 108.64441 * 359.62849 * 20 3 2 22 22 C 1.50705 * 125.56726 * 180.10836 * 21 20 3 23 23 O 1.42903 * 109.46629 * 65.28516 * 22 21 20 24 24 Si 1.86289 * 109.47426 * 185.28759 * 22 21 20 25 25 C 1.35453 * 108.87214 * 0.38012 * 21 20 3 26 26 H 1.08999 * 109.47484 * 89.99419 * 1 2 3 27 27 H 1.08998 * 109.47273 * 209.99597 * 1 2 3 28 28 H 1.09006 * 109.47313 * 329.99120 * 1 2 3 29 29 H 0.97002 * 120.00078 * 359.97438 * 6 4 3 30 30 H 1.09005 * 113.62125 * 334.52173 * 9 7 6 31 31 H 1.08996 * 113.68970 * 203.62749 * 9 7 6 32 32 H 1.08004 * 120.01433 * 0.02562 * 13 12 10 33 33 H 1.07996 * 120.01536 * 179.70384 * 16 14 13 34 34 H 1.07993 * 119.98936 * 180.02562 * 17 16 14 35 35 H 1.07995 * 119.97816 * 179.97438 * 18 17 16 36 36 H 1.09002 * 113.61445 * 89.11830 * 19 10 9 37 37 H 1.09002 * 113.61408 * 219.93560 * 19 10 9 38 38 H 0.97001 * 125.67826 * 179.74886 * 20 3 2 39 39 H 1.09001 * 109.46840 * 305.29498 * 22 21 20 40 40 H 0.96701 * 113.99722 * 60.00734 * 23 22 21 41 41 H 1.48498 * 110.00265 * 58.67966 * 24 22 21 42 42 H 1.48497 * 110.00238 * 180.02562 * 24 22 21 43 43 H 1.07997 * 126.06895 * 179.78633 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8899 2.5092 -0.0013 5 8 0.7026 2.7765 -0.0029 6 7 2.8037 3.4998 -0.0006 7 6 2.3678 4.8985 -0.0013 8 1 1.3647 5.0300 -0.4067 9 6 2.5908 5.6150 1.3441 10 6 3.9869 5.9930 0.8216 11 1 4.7530 5.2511 1.0468 12 6 4.4058 7.3958 1.1792 13 6 3.4757 8.4177 1.1704 14 6 3.8597 9.7056 1.5044 15 9 2.9502 10.7045 1.5012 16 6 5.1776 9.9698 1.8357 17 6 6.1074 8.9471 1.8382 18 6 5.7219 7.6610 1.5097 19 6 3.4044 5.8664 -0.5960 20 7 3.6283 0.6624 -0.0045 21 6 3.6217 -0.6929 0.0011 22 6 4.8433 -1.5755 0.0011 23 8 5.5628 -1.3927 1.2222 24 14 4.3221 -3.3574 -0.1519 25 6 2.3379 -1.1248 0.0006 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3634 0.8899 0.5140 29 1 3.7500 3.2867 0.0011 30 1 2.6128 4.9402 2.1999 31 1 1.9353 6.4721 1.4977 32 1 2.4486 8.2111 0.9078 33 1 5.4793 10.9746 2.0917 34 1 7.1355 9.1528 2.0970 35 1 6.4491 6.8625 1.5115 36 1 2.9708 6.7922 -0.9742 37 1 4.0838 5.3959 -1.3067 38 1 4.4190 1.2242 -0.0090 39 1 5.4830 -1.3104 -0.8407 40 1 5.0537 -1.6102 2.0150 41 1 3.5453 -3.5539 -1.4022 42 1 5.5177 -4.2381 -0.1525 43 1 2.0135 -2.1549 0.0010 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:14:25 Heat of formation + Delta-G solvation = -16.667160 kcal Electronic energy + Delta-G solvation = -27217.178418 eV Core-core repulsion = 23144.704937 eV Total energy + Delta-G solvation = -4072.473481 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -49.95486 -42.63023 -41.44867 -40.06343 -38.66953 -37.66835 -34.90340 -33.46362 -32.14019 -31.52969 -31.29439 -28.21353 -27.28614 -26.77165 -25.99951 -23.87254 -23.09158 -22.53507 -21.58193 -20.65850 -20.13949 -19.57384 -18.60122 -18.00858 -17.30498 -17.12365 -17.04862 -16.74827 -16.65867 -16.35782 -15.98366 -15.66290 -15.41844 -15.30187 -14.89085 -14.80486 -14.68349 -14.32042 -14.15861 -13.97430 -13.88616 -13.61400 -13.54914 -13.51807 -13.00525 -12.97159 -12.95126 -12.49896 -12.19680 -12.02486 -11.98178 -11.76280 -11.27508 -11.15573 -10.64813 -10.27162 -9.92208 -9.82067 -9.64974 -9.20461 -4.90672 0.13655 0.19892 0.28837 1.23820 1.52539 1.73022 1.89296 1.97534 2.21978 2.22692 2.54185 3.18881 3.41801 3.48267 3.57716 3.58469 3.61412 3.76257 3.80592 3.89859 4.03400 4.14070 4.19375 4.22240 4.23402 4.38938 4.42778 4.57122 4.69879 4.71989 4.75873 4.80024 4.83065 4.89802 4.90517 4.94918 5.05546 5.07983 5.14693 5.17259 5.31936 5.35872 5.44235 5.56751 5.63589 5.85157 5.90852 6.29581 6.46236 6.68750 7.04776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.085 4.085 3 C -0.070 4.070 4 C 0.590 3.410 5 O -0.561 6.561 6 N -0.700 5.700 7 C 0.117 3.883 8 H 0.089 0.911 9 C -0.143 4.143 10 C -0.064 4.064 11 H 0.121 0.879 12 C -0.046 4.046 13 C -0.160 4.160 14 C 0.072 3.928 15 F -0.155 7.155 16 C -0.169 4.169 17 C -0.090 4.090 18 C -0.126 4.126 19 C -0.125 4.125 20 N -0.513 5.513 21 C 0.034 3.966 22 C -0.053 4.053 23 O -0.553 6.553 24 Si 0.801 3.199 25 C -0.207 4.207 26 H 0.064 0.936 27 H 0.082 0.918 28 H 0.061 0.939 29 H 0.409 0.591 30 H 0.070 0.930 31 H 0.094 0.906 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.156 0.844 35 H 0.153 0.847 36 H 0.099 0.901 37 H 0.090 0.910 38 H 0.427 0.573 39 H 0.117 0.883 40 H 0.399 0.601 41 H -0.287 1.287 42 H -0.295 1.295 43 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.541 -3.347 1.506 6.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.094 4.094 3 C -0.184 4.184 4 C 0.379 3.621 5 O -0.439 6.439 6 N -0.351 5.351 7 C 0.011 3.989 8 H 0.107 0.893 9 C -0.182 4.182 10 C -0.082 4.082 11 H 0.139 0.861 12 C -0.046 4.046 13 C -0.178 4.178 14 C 0.054 3.946 15 F -0.134 7.134 16 C -0.187 4.187 17 C -0.108 4.108 18 C -0.144 4.144 19 C -0.163 4.163 20 N -0.111 5.111 21 C -0.085 4.085 22 C -0.162 4.162 23 O -0.361 6.361 24 Si 0.705 3.295 25 C -0.231 4.231 26 H 0.083 0.917 27 H 0.101 0.899 28 H 0.080 0.920 29 H 0.245 0.755 30 H 0.089 0.911 31 H 0.112 0.888 32 H 0.157 0.843 33 H 0.159 0.841 34 H 0.174 0.826 35 H 0.171 0.829 36 H 0.117 0.883 37 H 0.109 0.891 38 H 0.267 0.733 39 H 0.134 0.866 40 H 0.250 0.750 41 H -0.214 1.214 42 H -0.222 1.222 43 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 5.293 -3.483 0.629 6.368 hybrid contribution 0.525 1.386 -0.315 1.515 sum 5.818 -2.097 0.315 6.192 Atomic orbital electron populations 1.20343 0.89231 1.03066 1.02182 1.20177 0.96299 0.91357 1.01584 1.20096 0.84541 0.92967 1.20753 1.17207 0.85591 0.83697 0.75609 1.90827 1.17621 1.83720 1.51776 1.45401 1.09558 1.05107 1.75044 1.21896 0.99515 0.79787 0.97670 0.89318 1.23604 0.96627 1.00614 0.97359 1.21636 0.97285 0.92749 0.96519 0.86133 1.19680 0.93106 0.94738 0.97121 1.21133 1.01778 0.91051 1.03874 1.18047 0.87482 0.85449 1.03672 1.91477 1.66920 1.60551 1.94441 1.21430 0.91608 1.02160 1.03530 1.21364 1.00367 0.92000 0.97055 1.21486 0.95836 0.97770 0.99295 1.23380 0.97394 0.99440 0.96104 1.41804 1.06753 1.06754 1.55745 1.21301 0.97063 0.83371 1.06721 1.25006 0.91607 1.09040 0.90592 1.86477 1.42609 1.91188 1.15845 0.92980 0.79596 0.71165 0.85750 1.20845 0.90799 0.99546 1.11918 0.91738 0.89878 0.92048 0.75468 0.91079 0.88803 0.84348 0.84060 0.82650 0.82922 0.88300 0.89093 0.73283 0.86558 0.75045 1.21396 1.22229 0.81424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.38 9.83 71.23 0.70 0.32 16 2 C -0.09 -0.33 6.21 -19.57 -0.12 -0.45 16 3 C -0.07 -0.20 7.06 40.35 0.28 0.09 16 4 C 0.59 2.98 7.79 86.45 0.67 3.65 16 5 O -0.56 -7.27 14.40 -4.35 -0.06 -7.33 16 6 N -0.70 1.61 5.26 -443.55 -2.33 -0.73 16 7 C 0.12 -0.20 4.34 45.61 0.20 0.00 16 8 H 0.09 0.27 7.46 -2.39 -0.02 0.26 16 9 C -0.14 0.39 7.26 31.21 0.23 0.61 16 10 C -0.06 0.39 3.86 -11.01 -0.04 0.34 16 11 H 0.12 -1.19 8.10 -2.39 -0.02 -1.21 16 12 C -0.05 0.11 5.29 -19.87 -0.11 0.01 16 13 C -0.16 -0.19 8.57 22.31 0.19 0.00 16 14 C 0.07 0.32 7.30 22.37 0.16 0.48 16 15 F -0.16 -1.27 17.27 44.97 0.78 -0.49 16 16 C -0.17 -0.18 10.03 22.31 0.22 0.04 16 17 C -0.09 0.25 10.04 22.26 0.22 0.48 16 18 C -0.13 0.50 9.71 22.27 0.22 0.71 16 19 C -0.13 0.72 7.28 31.12 0.23 0.95 16 20 N -0.51 1.63 5.99 -171.94 -1.03 0.60 16 21 C 0.03 -0.10 6.47 41.35 0.27 0.17 16 22 C -0.05 0.28 3.08 71.24 0.22 0.50 16 23 O -0.55 2.92 12.88 -148.98 -1.92 1.00 16 24 Si 0.80 -4.46 30.56 68.60 2.10 -2.36 16 25 C -0.21 0.17 9.27 22.01 0.20 0.38 16 26 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 27 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 28 H 0.06 0.52 6.49 -2.38 -0.02 0.50 16 29 H 0.41 -3.50 7.83 -92.71 -0.73 -4.22 16 30 H 0.07 -0.08 8.14 -2.38 -0.02 -0.10 16 31 H 0.09 -0.18 6.32 -2.39 -0.02 -0.19 16 32 H 0.14 -0.04 6.67 -2.91 -0.02 -0.06 16 33 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 34 H 0.16 -1.19 8.06 -2.91 -0.02 -1.22 16 35 H 0.15 -1.39 8.05 -2.91 -0.02 -1.41 16 36 H 0.10 -0.47 7.71 -2.39 -0.02 -0.49 16 37 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 38 H 0.43 -3.68 8.19 -92.71 -0.76 -4.44 16 39 H 0.12 -0.64 7.96 -2.39 -0.02 -0.66 16 40 H 0.40 -4.89 8.70 -74.06 -0.64 -5.53 16 41 H -0.29 -0.11 7.11 99.48 0.71 0.60 16 42 H -0.29 -0.45 7.11 99.48 0.71 0.26 16 43 H 0.17 -0.89 6.19 -2.91 -0.02 -0.91 16 Total: 0.00 -20.80 362.32 0.27 -20.53 By element: Atomic # 1 Polarization: -18.49 SS G_CDS: -1.01 Total: -19.50 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 3.75 Total: 8.27 kcal Atomic # 7 Polarization: 3.24 SS G_CDS: -3.36 Total: -0.13 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -1.98 Total: -6.32 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 0.78 Total: -0.49 kcal Atomic # 14 Polarization: -4.46 SS G_CDS: 2.10 Total: -2.36 kcal Total: -20.80 0.27 -20.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.863 kcal (2) G-P(sol) polarization free energy of solvation -20.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.270 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.530 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds