Wall clock time and date at job start Mon Mar 8 2021 02:14:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.46985 * 2 1 4 4 C 1.50706 * 109.46798 * 120.00025 * 2 1 3 5 5 C 1.31112 * 118.54393 * 250.00174 * 4 2 1 6 6 N 1.38925 * 121.84856 * 180.38715 * 5 4 2 7 7 C 1.47036 * 118.87880 * 346.67974 * 6 5 4 8 8 C 1.50703 * 109.81927 * 163.20780 * 7 6 5 9 9 O 1.21281 * 119.99611 * 340.85760 * 8 7 6 10 10 N 1.34771 * 120.00305 * 160.86364 * 8 7 6 11 11 C 1.46494 * 120.00416 * 179.97438 * 10 8 7 12 12 H 1.09007 * 112.84770 * 23.80688 * 11 10 8 13 13 C 1.53779 * 113.61607 * 154.99637 * 11 10 8 14 14 C 1.53790 * 87.07821 * 89.20386 * 13 11 10 15 15 H 1.08993 * 113.61569 * 270.79956 * 14 13 11 16 16 C 1.50700 * 113.61240 * 139.98161 * 14 13 11 17 17 C 1.38226 * 119.98948 * 299.99479 * 16 14 13 18 18 C 1.38270 * 120.05340 * 179.97438 * 17 16 14 19 19 C 1.38175 * 120.02272 * 0.02562 * 18 17 16 20 20 C 1.38477 * 119.97476 * 359.97438 * 19 18 17 21 21 F 1.35106 * 120.02198 * 179.97438 * 20 19 18 22 22 C 1.38218 * 119.98739 * 120.00346 * 16 14 13 23 23 C 1.53778 * 113.69577 * 252.53725 * 11 10 8 24 24 C 1.53541 * 107.71119 * 43.63524 * 7 6 5 25 25 C 1.50200 * 118.54533 * 69.97869 * 4 2 1 26 26 H 0.96701 * 113.99830 * 300.00009 * 1 2 3 27 27 H 1.08998 * 109.47258 * 239.99782 * 2 1 3 28 28 H 1.48497 * 109.99850 * 178.67603 * 3 2 1 29 29 H 1.48496 * 110.00143 * 299.99918 * 3 2 1 30 30 H 1.08005 * 119.07866 * 0.35668 * 5 4 2 31 31 H 0.96996 * 120.56183 * 166.66132 * 6 5 4 32 32 H 1.08997 * 109.81923 * 284.06132 * 7 6 5 33 33 H 0.97004 * 119.99935 * 0.02562 * 10 8 7 34 34 H 1.08995 * 113.61930 * 334.65883 * 13 11 10 35 35 H 1.08998 * 113.69219 * 203.76120 * 13 11 10 36 36 H 1.08003 * 119.97173 * 0.02884 * 17 16 14 37 37 H 1.07999 * 119.98208 * 180.27896 * 18 17 16 38 38 H 1.08007 * 120.00902 * 179.97438 * 19 18 17 39 39 H 1.07996 * 120.01122 * 0.02562 * 22 16 14 40 40 H 1.08994 * 113.61758 * 156.32165 * 23 11 10 41 41 H 1.09009 * 113.61150 * 25.42146 * 23 11 10 42 42 H 1.09000 * 109.62183 * 58.80535 * 24 7 6 43 43 H 1.08997 * 109.62062 * 179.35505 * 24 7 6 44 44 H 1.08997 * 109.32968 * 280.22874 * 25 4 2 45 45 H 1.09003 * 109.33143 * 39.88305 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.5115 -0.0029 2.1695 6 7 3.0066 -0.5880 3.3282 7 6 2.6219 -1.9713 3.6454 8 6 3.5610 -2.5387 4.6785 9 8 4.6440 -2.0242 4.8611 10 7 3.1974 -3.6177 5.3995 11 6 4.1105 -4.1696 6.4033 12 1 4.8289 -3.4366 6.7706 13 6 3.3984 -4.9481 7.5221 14 6 3.5379 -6.1963 6.6345 15 1 2.7014 -6.3418 5.9511 16 6 3.8919 -7.4450 7.4004 17 6 5.0642 -7.4986 8.1307 18 6 5.3901 -8.6434 8.8343 19 6 4.5441 -9.7356 8.8076 20 6 3.3694 -9.6831 8.0763 21 9 2.5418 -10.7506 8.0491 22 6 3.0442 -8.5364 7.3721 23 6 4.7504 -5.5051 5.9889 24 6 2.7156 -2.7909 2.3505 25 6 1.7446 -2.1977 1.3271 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7703 0.0322 29 1 1.5615 2.4679 -1.2085 30 1 2.6077 1.0649 2.0384 31 1 3.5964 -0.0926 3.9177 32 1 1.5999 -1.9931 4.0236 33 1 2.3314 -4.0294 5.2531 34 1 2.3654 -4.6383 7.6804 35 1 3.9700 -5.0050 8.4484 36 1 5.7258 -6.6452 8.1525 37 1 6.3041 -8.6824 9.4082 38 1 4.7991 -10.6299 9.3569 39 1 2.1286 -8.4946 6.8010 40 1 5.6927 -5.7136 6.4954 41 1 4.8090 -5.6448 4.9094 42 1 3.7321 -2.7431 1.9598 43 1 2.4470 -3.8276 2.5532 44 1 0.7215 -2.4136 1.6347 45 1 1.9312 -2.6488 0.3525 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:14:34 Heat of formation + Delta-G solvation = -39.324462 kcal Electronic energy + Delta-G solvation = -27678.350339 eV Core-core repulsion = 23577.582885 eV Total energy + Delta-G solvation = -4100.767454 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -49.83751 -41.89373 -40.90146 -39.63252 -38.67951 -37.30120 -34.81200 -33.26526 -33.03588 -32.11538 -31.27607 -27.80767 -26.93184 -26.28978 -25.40780 -23.95395 -23.74992 -22.85893 -21.98714 -20.44290 -19.46152 -19.08541 -18.55077 -17.94655 -17.42988 -17.22755 -17.13886 -16.81347 -16.55266 -16.45350 -16.07051 -15.78683 -15.76246 -15.45968 -15.22393 -14.92270 -14.69171 -14.47114 -14.27396 -14.07277 -14.00870 -13.91527 -13.71005 -13.11316 -13.07065 -12.95734 -12.93425 -12.86579 -12.14543 -11.99906 -11.95187 -11.87774 -11.83802 -11.45228 -11.31469 -10.90784 -10.27164 -10.14544 -9.99480 -9.67137 -8.51522 -4.99034 0.08927 0.15246 1.28691 1.40609 1.42311 1.67777 1.74917 2.06932 2.47586 2.54609 3.16243 3.22826 3.37718 3.47336 3.53231 3.60799 3.68793 3.72826 3.78987 3.80960 3.91347 3.92612 4.00311 4.10057 4.21175 4.30863 4.31582 4.45230 4.53027 4.54543 4.62880 4.65812 4.68675 4.69151 4.78909 4.81355 4.91279 4.93865 5.00795 5.09151 5.14844 5.22680 5.26518 5.33379 5.47130 5.50677 5.84573 6.14009 6.30933 6.73979 6.78580 6.98852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.043 4.043 3 Si 0.665 3.335 4 C -0.279 4.279 5 C 0.145 3.855 6 N -0.732 5.732 7 C 0.138 3.862 8 C 0.516 3.484 9 O -0.527 6.527 10 N -0.709 5.709 11 C 0.119 3.881 12 H 0.107 0.893 13 C -0.134 4.134 14 C -0.075 4.075 15 H 0.100 0.900 16 C -0.043 4.043 17 C -0.129 4.129 18 C -0.086 4.086 19 C -0.158 4.158 20 C 0.101 3.899 21 F -0.139 7.139 22 C -0.151 4.151 23 C -0.143 4.143 24 C -0.128 4.128 25 C -0.051 4.051 26 H 0.375 0.625 27 H 0.104 0.896 28 H -0.260 1.260 29 H -0.258 1.258 30 H 0.134 0.866 31 H 0.409 0.591 32 H 0.092 0.908 33 H 0.404 0.596 34 H 0.079 0.921 35 H 0.101 0.899 36 H 0.131 0.869 37 H 0.134 0.866 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.098 0.902 41 H 0.076 0.924 42 H 0.075 0.925 43 H 0.079 0.921 44 H 0.070 0.930 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.428 0.391 3.855 4.129 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.155 4.155 3 Si 0.568 3.432 4 C -0.290 4.290 5 C 0.025 3.975 6 N -0.365 5.365 7 C 0.028 3.972 8 C 0.301 3.699 9 O -0.402 6.402 10 N -0.361 5.361 11 C 0.014 3.986 12 H 0.125 0.875 13 C -0.172 4.172 14 C -0.094 4.094 15 H 0.119 0.881 16 C -0.043 4.043 17 C -0.147 4.147 18 C -0.104 4.104 19 C -0.177 4.177 20 C 0.082 3.918 21 F -0.118 7.118 22 C -0.170 4.170 23 C -0.182 4.182 24 C -0.167 4.167 25 C -0.088 4.088 26 H 0.222 0.778 27 H 0.121 0.879 28 H -0.185 1.185 29 H -0.183 1.183 30 H 0.151 0.849 31 H 0.246 0.754 32 H 0.110 0.890 33 H 0.238 0.762 34 H 0.098 0.902 35 H 0.119 0.881 36 H 0.149 0.851 37 H 0.152 0.848 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.116 0.884 41 H 0.095 0.905 42 H 0.094 0.906 43 H 0.097 0.903 44 H 0.088 0.912 45 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.144 0.908 3.026 3.163 hybrid contribution -0.226 -1.005 -0.037 1.030 sum -0.370 -0.096 2.989 3.014 Atomic orbital electron populations 1.86480 1.18042 1.81625 1.49102 1.24720 0.84612 1.08371 0.97753 0.95373 0.81166 0.78920 0.87704 1.20961 1.13667 0.96277 0.98067 1.20309 0.95358 0.95632 0.86230 1.44275 1.54809 1.12238 1.25208 1.20983 0.97285 0.84436 0.94467 1.20636 0.87741 0.80111 0.81421 1.90745 1.22683 1.59826 1.66978 1.45610 1.20580 1.30909 1.38958 1.21866 0.92781 0.95232 0.88756 0.87472 1.23430 1.02196 0.94000 0.97586 1.21642 0.99470 0.90972 0.97280 0.88141 1.19512 0.93908 0.94290 0.96628 1.21102 0.96968 0.98698 0.97885 1.21049 0.99122 0.92239 0.98011 1.21222 0.94177 1.00861 1.01424 1.17739 0.89877 0.84540 0.99629 1.91527 1.70930 1.54229 1.95084 1.21051 1.01619 0.92435 1.01901 1.23577 0.97773 0.94849 1.01962 1.21887 1.01885 0.98619 0.94268 1.19929 0.98535 0.91650 0.98716 0.77846 0.87852 1.18499 1.18318 0.84939 0.75357 0.89003 0.76152 0.90217 0.88093 0.85148 0.84797 0.84673 0.84783 0.88407 0.90507 0.90605 0.90285 0.91167 0.90953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.33 12.88 -35.23 -0.45 -0.78 16 2 C -0.04 -0.01 2.81 36.01 0.10 0.10 16 3 Si 0.67 -0.34 29.72 -169.99 -5.05 -5.39 16 4 C -0.28 0.09 5.37 -101.34 -0.54 -0.46 16 5 C 0.15 -0.13 9.62 -16.08 -0.15 -0.29 16 6 N -0.73 0.49 5.47 -55.34 -0.30 0.18 16 7 C 0.14 -0.23 3.36 -68.51 -0.23 -0.46 16 8 C 0.52 -0.18 7.09 -10.99 -0.08 -0.25 16 9 O -0.53 -1.93 15.68 5.56 0.09 -1.84 16 10 N -0.71 2.06 5.27 -53.02 -0.28 1.78 16 11 C 0.12 -0.29 4.32 -67.12 -0.29 -0.58 16 12 H 0.11 -0.07 7.46 -51.93 -0.39 -0.46 16 13 C -0.13 0.49 7.29 -25.92 -0.19 0.30 16 14 C -0.08 0.24 3.86 -90.96 -0.35 -0.11 16 15 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 16 C -0.04 0.06 5.29 -104.63 -0.55 -0.49 16 17 C -0.13 0.20 8.61 -39.57 -0.34 -0.14 16 18 C -0.09 0.10 10.04 -39.59 -0.40 -0.30 16 19 C -0.16 -0.01 10.03 -39.52 -0.40 -0.41 16 20 C 0.10 0.13 7.30 -39.42 -0.29 -0.16 16 21 F -0.14 -0.39 17.27 2.25 0.04 -0.35 16 22 C -0.15 0.02 9.69 -39.52 -0.38 -0.36 16 23 C -0.14 0.37 7.25 -25.92 -0.19 0.18 16 24 C -0.13 0.19 5.48 -26.43 -0.14 0.05 16 25 C -0.05 0.04 5.85 -28.11 -0.16 -0.13 16 26 H 0.37 -1.25 8.70 45.56 0.40 -0.86 16 27 H 0.10 0.11 7.96 -51.93 -0.41 -0.30 16 28 H -0.26 -0.58 7.11 56.52 0.40 -0.17 16 29 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 30 H 0.13 -0.36 4.49 -52.48 -0.24 -0.59 16 31 H 0.41 -0.19 8.10 -40.82 -0.33 -0.52 16 32 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.40 -2.17 8.70 -40.82 -0.36 -2.52 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 35 H 0.10 -0.37 7.72 -51.93 -0.40 -0.77 16 36 H 0.13 -0.43 6.66 -52.48 -0.35 -0.78 16 37 H 0.13 -0.42 8.06 -52.49 -0.42 -0.85 16 38 H 0.14 -0.15 8.06 -52.48 -0.42 -0.58 16 39 H 0.13 -0.19 8.05 -52.49 -0.42 -0.62 16 40 H 0.10 -0.28 6.31 -51.93 -0.33 -0.60 16 41 H 0.08 -0.13 8.14 -51.92 -0.42 -0.55 16 42 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 43 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 44 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 369.11 15.07 5.56 5.56 Total: 0.00 -7.98 369.11 -11.24 -19.22 By element: Atomic # 1 Polarization: -8.63 SS G_CDS: -6.25 Total: -14.88 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -4.59 Total: -3.50 kcal Atomic # 7 Polarization: 2.55 SS G_CDS: -0.58 Total: 1.96 kcal Atomic # 8 Polarization: -2.25 SS G_CDS: -0.37 Total: -2.62 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.05 Total: -5.39 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.98 -11.24 -19.22 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.105 kcal (2) G-P(sol) polarization free energy of solvation -7.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.241 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.324 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds