Wall clock time and date at job start Mon Mar 8 2021 02:15:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38243 * 119.97460 * 244.72565 * 4 2 1 6 6 C 1.38288 * 120.11731 * 179.76334 * 5 4 2 7 7 C 1.38126 * 120.04997 * 0.50905 * 6 5 4 8 8 C 1.38748 * 119.94569 * 359.74630 * 7 6 5 9 9 O 1.35898 * 120.05887 * 179.97438 * 8 7 6 10 10 C 1.42904 * 116.99761 * 0.02562 * 9 8 7 11 11 C 1.50700 * 109.47305 * 180.02562 * 10 9 8 12 12 O 1.21283 * 119.99730 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00214 * 180.02562 * 11 10 9 14 14 C 1.46497 * 120.00031 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.84938 * 334.66754 * 14 13 11 16 16 C 1.53778 * 113.61343 * 105.86553 * 14 13 11 17 17 C 1.54055 * 86.98589 * 89.16392 * 16 14 13 18 18 H 1.09001 * 113.60692 * 270.88029 * 17 16 14 19 19 C 1.50703 * 113.62034 * 139.98073 * 17 16 14 20 20 C 1.38224 * 119.98353 * 322.22399 * 19 17 16 21 21 C 1.38271 * 120.04644 * 179.76799 * 20 19 17 22 22 C 1.38179 * 120.02632 * 0.51221 * 21 20 19 23 23 C 1.38488 * 119.97111 * 359.73957 * 22 21 20 24 24 F 1.35099 * 120.01914 * 180.02562 * 23 22 21 25 25 C 1.38216 * 119.98659 * 142.50122 * 19 17 16 26 26 C 1.53779 * 87.07842 * 25.42961 * 17 16 14 27 27 C 1.38166 * 119.97264 * 64.99337 * 4 2 1 28 28 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 29 29 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 30 30 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 31 31 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 32 32 H 1.08001 * 119.94099 * 359.97438 * 5 4 2 33 33 H 1.07993 * 119.97508 * 180.23029 * 6 5 4 34 34 H 1.07994 * 120.02621 * 179.77206 * 7 6 5 35 35 H 1.08999 * 109.47033 * 300.00348 * 10 9 8 36 36 H 1.08995 * 109.46891 * 60.00266 * 10 9 8 37 37 H 0.97002 * 120.00088 * 0.02562 * 13 11 10 38 38 H 1.09005 * 113.61232 * 203.66072 * 16 14 13 39 39 H 1.08999 * 113.61550 * 334.56425 * 16 14 13 40 40 H 1.07991 * 119.97634 * 0.02562 * 20 19 17 41 41 H 1.07997 * 119.98748 * 180.25841 * 21 20 19 42 42 H 1.07994 * 120.01301 * 179.77311 * 22 21 20 43 43 H 1.08005 * 120.01412 * 359.95118 * 25 19 17 44 44 H 1.09002 * 113.61508 * 220.02443 * 26 17 16 45 45 H 1.08996 * 113.61293 * 89.12401 * 26 17 16 46 46 H 1.08002 * 120.02741 * 359.96704 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0130 2.1882 6 6 3.1017 -0.6609 3.3208 7 6 2.8576 -2.0095 3.4927 8 6 2.1475 -2.7129 2.5303 9 8 1.9064 -4.0400 2.6968 10 6 2.4130 -4.6470 3.8872 11 6 2.0522 -6.1101 3.8978 12 8 1.4235 -6.5863 2.9763 13 7 2.4281 -6.8895 4.9310 14 6 2.0768 -8.3117 4.9415 15 1 1.1899 -8.5330 4.3478 16 6 3.2648 -9.2418 4.6446 17 6 3.5377 -9.2434 6.1608 18 1 4.1985 -8.4400 6.4862 19 6 3.9431 -10.5911 6.6999 20 6 3.3531 -11.7390 6.2051 21 6 3.7275 -12.9764 6.6955 22 6 4.6844 -13.0661 7.6883 23 6 5.2724 -11.9163 8.1884 24 9 6.2084 -12.0028 9.1587 25 6 4.9005 -10.6783 7.6930 26 6 2.0446 -8.9279 6.3502 27 6 1.6844 -2.0595 1.3977 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2085 32 1 2.8396 1.0405 2.0534 33 1 3.6547 -0.1130 4.0693 34 1 3.2187 -2.5159 4.3755 35 1 3.4974 -4.5403 3.9162 36 1 1.9765 -4.1585 4.7582 37 1 2.9306 -6.5086 5.6681 38 1 2.9699 -10.2154 4.2531 39 1 4.0530 -8.7698 4.0581 40 1 2.6022 -11.6696 5.4321 41 1 3.2689 -13.8729 6.3053 42 1 4.9740 -14.0325 8.0737 43 1 5.3587 -9.7809 8.0820 44 1 1.8483 -8.2025 7.1397 45 1 1.4167 -9.8157 6.4241 46 1 1.1311 -2.6048 0.6474 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:15:46 Heat of formation + Delta-G solvation = -58.638542 kcal Electronic energy + Delta-G solvation = -29536.733350 eV Core-core repulsion = 25080.957432 eV Total energy + Delta-G solvation = -4455.775918 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -49.92635 -41.76973 -41.23688 -40.26550 -39.07886 -38.48370 -37.40384 -34.70860 -32.60645 -32.25356 -31.65408 -31.20284 -29.25608 -26.85751 -26.70621 -26.12951 -23.79143 -23.66178 -23.09388 -22.44333 -21.58761 -20.28346 -19.21796 -18.59878 -18.50786 -18.13769 -17.47457 -17.42277 -17.33905 -17.07849 -17.03774 -16.64474 -16.63030 -15.91113 -15.82032 -15.66718 -15.44373 -15.22922 -14.79078 -14.53819 -14.53557 -14.18066 -14.12711 -13.86091 -13.76896 -13.63588 -13.47455 -13.30597 -12.97753 -12.82314 -12.72161 -12.52111 -12.13400 -11.99846 -11.79069 -11.71365 -11.69789 -11.28181 -11.04188 -10.55296 -10.18436 -9.91606 -9.90431 -9.61078 -9.28492 -4.91913 0.15432 0.20352 0.23868 0.39249 1.26383 1.40454 1.46825 1.61811 1.94525 2.56174 2.56874 2.63463 3.22956 3.38144 3.42913 3.50781 3.65313 3.69197 3.79502 3.83801 3.87046 3.95833 4.01094 4.08778 4.10307 4.13264 4.15289 4.25608 4.25785 4.27177 4.42302 4.48639 4.62854 4.65948 4.77502 4.82361 4.88833 4.93032 4.97701 5.01721 5.10400 5.12906 5.18015 5.23364 5.36473 5.37508 5.45307 5.46915 5.62293 5.68818 5.93396 6.26825 6.45260 6.55474 7.10629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.098 4.098 3 Si 0.782 3.218 4 C -0.048 4.048 5 C -0.161 4.161 6 C -0.070 4.070 7 C -0.202 4.202 8 C 0.114 3.886 9 O -0.322 6.322 10 C 0.037 3.963 11 C 0.516 3.484 12 O -0.572 6.572 13 N -0.692 5.692 14 C 0.114 3.886 15 H 0.084 0.916 16 C -0.142 4.142 17 C -0.067 4.067 18 H 0.117 0.883 19 C -0.044 4.044 20 C -0.130 4.130 21 C -0.090 4.090 22 C -0.169 4.169 23 C 0.072 3.928 24 F -0.155 7.155 25 C -0.157 4.157 26 C -0.122 4.122 27 C -0.150 4.150 28 H 0.395 0.605 29 H 0.090 0.910 30 H -0.287 1.287 31 H -0.293 1.293 32 H 0.145 0.855 33 H 0.164 0.836 34 H 0.164 0.836 35 H 0.129 0.871 36 H 0.125 0.875 37 H 0.422 0.578 38 H 0.100 0.900 39 H 0.070 0.930 40 H 0.147 0.853 41 H 0.153 0.847 42 H 0.140 0.860 43 H 0.145 0.855 44 H 0.092 0.908 45 H 0.104 0.896 46 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.387 2.125 3.147 5.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.205 4.205 3 Si 0.686 3.314 4 C -0.048 4.048 5 C -0.178 4.178 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.069 3.931 9 O -0.236 6.236 10 C -0.041 4.041 11 C 0.302 3.698 12 O -0.450 6.450 13 N -0.346 5.346 14 C 0.009 3.991 15 H 0.102 0.898 16 C -0.181 4.181 17 C -0.085 4.085 18 H 0.135 0.865 19 C -0.045 4.045 20 C -0.148 4.148 21 C -0.108 4.108 22 C -0.188 4.188 23 C 0.053 3.947 24 F -0.133 7.133 25 C -0.176 4.176 26 C -0.160 4.160 27 C -0.169 4.169 28 H 0.245 0.755 29 H 0.107 0.893 30 H -0.214 1.214 31 H -0.220 1.220 32 H 0.162 0.838 33 H 0.182 0.818 34 H 0.181 0.819 35 H 0.146 0.854 36 H 0.142 0.858 37 H 0.260 0.740 38 H 0.118 0.882 39 H 0.088 0.912 40 H 0.165 0.835 41 H 0.171 0.829 42 H 0.158 0.842 43 H 0.163 0.837 44 H 0.111 0.889 45 H 0.122 0.878 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 3.752 2.153 2.950 5.235 hybrid contribution -0.809 -0.413 -0.039 0.909 sum 2.943 1.739 2.911 4.490 Atomic orbital electron populations 1.86555 1.18646 1.80883 1.50963 1.25243 0.84097 1.12871 0.98312 0.93936 0.90041 0.70964 0.76478 1.19259 0.97255 0.92475 0.95794 1.21205 1.01194 1.00616 0.94828 1.21319 0.96935 0.93641 0.96921 1.21637 1.03529 0.96243 1.00586 1.19159 0.96244 0.82376 0.95305 1.86118 1.74674 1.20710 1.42084 1.22746 1.02746 0.90026 0.88574 1.20538 0.78652 0.88512 0.82108 1.90769 1.40958 1.76005 1.37260 1.45340 1.57398 1.08824 1.23009 1.21866 0.98443 0.79734 0.99059 0.89776 1.23624 0.98196 1.00637 0.95600 1.21703 0.97490 0.93769 0.95522 0.86538 1.19699 0.94413 0.95915 0.94429 1.21397 1.00826 0.91658 1.00898 1.21325 0.95482 0.99231 0.94788 1.21415 0.99518 0.97983 0.99904 1.18069 0.90872 0.95772 0.89965 1.91476 1.63460 1.97258 1.61146 1.21230 1.00383 0.96543 0.99408 1.23378 0.95231 1.01860 0.95508 1.20308 1.04046 0.94574 0.97975 0.75485 0.89259 1.21437 1.22021 0.83807 0.81830 0.81871 0.85386 0.85755 0.74006 0.88197 0.91165 0.83500 0.82942 0.84169 0.83725 0.88930 0.87810 0.86845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.01 12.81 -148.98 -1.91 -4.92 16 2 C -0.10 -0.19 2.79 71.24 0.20 0.01 16 3 Si 0.78 -1.30 29.84 68.60 2.05 0.75 16 4 C -0.05 -0.23 5.38 -19.88 -0.11 -0.33 16 5 C -0.16 -0.09 8.67 22.28 0.19 0.10 16 6 C -0.07 0.18 10.04 22.26 0.22 0.41 16 7 C -0.20 0.34 9.04 22.37 0.20 0.54 16 8 C 0.11 0.61 6.69 22.51 0.15 0.76 16 9 O -0.32 -2.37 9.67 -73.36 -0.71 -3.08 16 10 C 0.04 -0.11 5.22 71.24 0.37 0.26 16 11 C 0.52 1.15 7.91 87.66 0.69 1.84 16 12 O -0.57 -8.22 16.12 16.00 0.26 -7.96 16 13 N -0.69 3.87 5.26 -440.04 -2.32 1.56 16 14 C 0.11 -0.45 4.29 45.52 0.20 -0.26 16 15 H 0.08 0.12 7.50 -2.39 -0.02 0.10 16 16 C -0.14 0.70 7.27 31.21 0.23 0.93 16 17 C -0.07 0.50 3.87 -10.92 -0.04 0.45 16 18 H 0.12 -1.21 8.10 -2.39 -0.02 -1.23 16 19 C -0.04 0.15 5.29 -19.87 -0.11 0.04 16 20 C -0.13 0.47 8.60 22.27 0.19 0.66 16 21 C -0.09 0.23 10.04 22.26 0.22 0.45 16 22 C -0.17 -0.13 10.03 22.32 0.22 0.10 16 23 C 0.07 0.24 7.30 22.38 0.16 0.40 16 24 F -0.15 -1.06 17.27 44.97 0.78 -0.28 16 25 C -0.16 0.07 9.69 22.31 0.22 0.29 16 26 C -0.12 0.98 7.29 31.12 0.23 1.21 16 27 C -0.15 -1.23 9.62 22.37 0.22 -1.02 16 28 H 0.39 -1.24 8.74 -74.06 -0.65 -1.88 16 29 H 0.09 -0.09 7.96 -2.39 -0.02 -0.11 16 30 H -0.29 -0.70 7.11 99.48 0.71 0.00 16 31 H -0.29 -1.34 7.05 99.48 0.70 -0.64 16 32 H 0.14 -0.48 4.86 -2.91 -0.01 -0.49 16 33 H 0.16 -1.51 8.06 -2.91 -0.02 -1.54 16 34 H 0.16 -1.53 6.30 -2.91 -0.02 -1.55 16 35 H 0.13 -1.28 7.66 -2.39 -0.02 -1.30 16 36 H 0.12 -1.16 7.66 -2.39 -0.02 -1.18 16 37 H 0.42 -5.60 8.70 -92.71 -0.81 -6.41 16 38 H 0.10 -0.53 6.33 -2.38 -0.02 -0.54 16 39 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 40 H 0.15 -1.07 6.67 -2.92 -0.02 -1.09 16 41 H 0.15 -1.05 8.06 -2.91 -0.02 -1.08 16 42 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 43 H 0.14 -0.51 8.06 -2.91 -0.02 -0.54 16 44 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 45 H 0.10 -0.83 7.71 -2.39 -0.02 -0.85 16 46 H 0.11 1.22 8.06 -2.91 -0.02 1.20 16 Total: 0.00 -29.02 388.93 1.43 -27.59 By element: Atomic # 1 Polarization: -20.14 SS G_CDS: -0.38 Total: -20.52 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: 3.66 Total: 6.86 kcal Atomic # 7 Polarization: 3.87 SS G_CDS: -2.32 Total: 1.56 kcal Atomic # 8 Polarization: -13.60 SS G_CDS: -2.36 Total: -15.95 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.78 Total: -0.28 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: 2.05 Total: 0.75 kcal Total: -29.02 1.43 -27.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.048 kcal (2) G-P(sol) polarization free energy of solvation -29.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds