Wall clock time and date at job start Mon Mar 8 2021 02:16:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47077 * 2 1 4 4 C 1.50694 * 109.47460 * 120.00196 * 2 1 3 5 5 C 1.38247 * 119.94149 * 64.99935 * 4 2 1 6 6 C 1.38242 * 120.04652 * 180.02562 * 5 4 2 7 7 Br 1.89095 * 120.03383 * 179.97438 * 6 5 4 8 8 C 1.38789 * 119.92803 * 359.97438 * 6 5 4 9 9 O 1.35913 * 120.05991 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00268 * 180.02562 * 9 8 6 11 11 C 1.50696 * 109.47455 * 179.97438 * 10 9 8 12 12 O 1.21288 * 119.99865 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00223 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99912 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85240 * 23.81203 * 14 13 11 16 16 C 1.53785 * 113.61412 * 155.00423 * 14 13 11 17 17 C 1.53776 * 87.08262 * 89.11616 * 16 14 13 18 18 H 1.08997 * 113.61747 * 270.80164 * 17 16 14 19 19 C 1.50701 * 113.61415 * 139.97832 * 17 16 14 20 20 C 1.38226 * 119.98168 * 121.52669 * 19 17 16 21 21 C 1.38265 * 120.04947 * 179.70260 * 20 19 17 22 22 C 1.38183 * 120.02475 * 0.28283 * 21 20 19 23 23 C 1.38478 * 119.97265 * 359.97438 * 22 21 20 24 24 F 1.35104 * 120.02290 * 180.02562 * 23 22 21 25 25 C 1.38221 * 119.99248 * 301.78882 * 19 17 16 26 26 C 1.53789 * 87.17183 * 25.39367 * 17 16 14 27 27 C 1.38723 * 119.88277 * 0.27956 * 8 6 5 28 28 C 1.38146 * 119.94959 * 359.46623 * 27 8 6 29 29 H 0.96701 * 113.99881 * 299.99619 * 1 2 3 30 30 H 1.09000 * 109.47373 * 240.00255 * 2 1 3 31 31 H 1.48497 * 110.00257 * 178.68234 * 3 2 1 32 32 H 1.48502 * 110.00126 * 300.00343 * 3 2 1 33 33 H 1.07995 * 119.97496 * 0.02562 * 5 4 2 34 34 H 1.08998 * 109.47491 * 59.99805 * 10 9 8 35 35 H 1.09000 * 109.46858 * 299.99728 * 10 9 8 36 36 H 0.96997 * 120.00230 * 0.02562 * 13 11 10 37 37 H 1.09003 * 113.61486 * 334.56408 * 16 14 13 38 38 H 1.09003 * 113.61701 * 203.67113 * 16 14 13 39 39 H 1.08002 * 119.97943 * 359.97438 * 20 19 17 40 40 H 1.08003 * 119.99150 * 180.30236 * 21 20 19 41 41 H 1.07995 * 120.01109 * 180.02562 * 22 21 20 42 42 H 1.08000 * 120.00673 * 0.02562 * 25 19 17 43 43 H 1.08994 * 113.61293 * 89.15839 * 26 17 16 44 44 H 1.09005 * 113.60922 * 220.06218 * 26 17 16 45 45 H 1.08000 * 120.02102 * 179.72813 * 27 8 6 46 46 H 1.08008 * 119.95820 * 180.25435 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0603 1.3970 6 6 2.1435 -2.7141 2.5251 7 35 1.8045 -4.5604 2.7531 8 6 2.8539 -2.0138 3.4902 9 8 3.3072 -2.6540 4.6001 10 6 4.0303 -1.8702 5.5513 11 6 4.4495 -2.7427 6.7062 12 8 4.1574 -3.9199 6.7143 13 7 5.1491 -2.2150 7.7303 14 6 5.5561 -3.0631 8.8533 15 1 5.6169 -4.1182 8.5866 16 6 6.7966 -2.5439 9.5994 17 6 5.8301 -1.7415 10.4865 18 1 5.6033 -0.7487 10.0982 19 6 6.2190 -1.7258 11.9424 20 6 6.4520 -0.5228 12.5821 21 6 6.8028 -0.5064 13.9194 22 6 6.9267 -1.6931 14.6164 23 6 6.6987 -2.8991 13.9751 24 9 6.8190 -4.0600 14.6556 25 6 6.3479 -2.9143 12.6360 26 6 4.7630 -2.7951 10.1454 27 6 3.0958 -0.6582 3.3225 28 6 2.6389 -0.0110 2.1907 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 3.5345 1.7703 0.0321 32 1 1.5614 2.4679 -1.2085 33 1 1.1317 -2.6045 0.6454 34 1 3.3937 -1.0647 5.9173 35 1 4.9149 -1.4467 5.0757 36 1 5.3824 -1.2735 7.7241 37 1 7.4460 -1.9199 8.9854 38 1 7.3398 -3.3211 10.1371 39 1 6.3556 0.4053 12.0382 40 1 6.9799 0.4343 14.4196 41 1 7.2004 -1.6800 15.6610 42 1 6.1703 -3.8543 12.1347 43 1 4.7492 -3.6409 10.8327 44 1 3.7730 -2.3733 9.9715 45 1 3.6445 -0.1102 4.0741 46 1 2.8308 1.0436 2.0581 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:16:10 Heat of formation + Delta-G solvation = -55.990218 kcal Electronic energy + Delta-G solvation = -31778.688707 eV Core-core repulsion = 26983.209626 eV Total energy + Delta-G solvation = -4795.479081 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -49.83396 -41.91429 -41.46544 -40.35732 -39.31364 -38.58886 -37.27153 -34.77162 -33.61610 -32.18547 -31.92224 -31.57175 -30.49442 -29.66038 -26.92946 -26.63631 -26.19727 -24.25502 -23.77200 -22.86047 -22.49069 -21.95238 -20.44725 -19.69001 -18.80251 -18.47092 -18.13906 -17.64120 -17.35982 -17.23820 -17.11371 -17.02017 -16.54728 -16.50313 -16.08363 -15.95412 -15.71182 -15.51203 -15.41766 -14.95148 -14.88004 -14.76284 -14.42768 -14.32756 -14.02113 -13.95402 -13.87991 -13.74557 -13.65063 -13.08267 -13.04765 -12.58256 -12.40935 -12.32935 -12.19672 -12.14836 -11.95633 -11.88444 -11.81292 -11.39183 -11.07328 -10.99505 -10.51800 -10.28477 -10.00546 -9.97782 -9.68486 -9.35977 -5.15028 -0.12001 0.04067 0.09173 0.14330 0.70455 1.19717 1.24717 1.37913 1.52842 1.89214 2.31175 2.33907 2.47360 3.13116 3.27799 3.30441 3.35217 3.44798 3.47439 3.51739 3.55943 3.62898 3.66904 3.73188 3.75622 3.79274 3.95618 3.99617 4.03214 4.10727 4.25454 4.30020 4.41652 4.44834 4.52892 4.54260 4.63326 4.68184 4.73917 4.78310 4.81714 4.87736 4.92106 4.99887 5.08975 5.14075 5.24074 5.33388 5.38224 5.46100 5.84334 5.93048 6.22686 6.49574 6.99617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.064 4.064 3 Si 0.686 3.314 4 C -0.152 4.152 5 C -0.024 4.024 6 C -0.123 4.123 7 Br -0.024 7.024 8 C 0.160 3.840 9 O -0.274 6.274 10 C 0.037 3.963 11 C 0.518 3.482 12 O -0.503 6.503 13 N -0.711 5.711 14 C 0.121 3.879 15 H 0.109 0.891 16 C -0.135 4.135 17 C -0.075 4.075 18 H 0.102 0.898 19 C -0.044 4.044 20 C -0.127 4.127 21 C -0.087 4.087 22 C -0.158 4.158 23 C 0.102 3.898 24 F -0.139 7.139 25 C -0.153 4.153 26 C -0.144 4.144 27 C -0.201 4.201 28 C -0.059 4.059 29 H 0.380 0.620 30 H 0.115 0.885 31 H -0.256 1.256 32 H -0.253 1.253 33 H 0.144 0.856 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.403 0.597 37 H 0.080 0.920 38 H 0.101 0.899 39 H 0.129 0.871 40 H 0.134 0.866 41 H 0.135 0.865 42 H 0.136 0.864 43 H 0.097 0.903 44 H 0.078 0.922 45 H 0.141 0.859 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.049 9.116 2.339 9.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.175 4.175 3 Si 0.588 3.412 4 C -0.154 4.154 5 C -0.043 4.043 6 C -0.203 4.203 7 Br 0.061 6.939 8 C 0.112 3.888 9 O -0.185 6.185 10 C -0.041 4.041 11 C 0.302 3.698 12 O -0.375 6.375 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.127 0.873 16 C -0.173 4.173 17 C -0.093 4.093 18 H 0.120 0.880 19 C -0.044 4.044 20 C -0.145 4.145 21 C -0.105 4.105 22 C -0.177 4.177 23 C 0.083 3.917 24 F -0.117 7.117 25 C -0.171 4.171 26 C -0.182 4.182 27 C -0.220 4.220 28 C -0.077 4.077 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.181 1.181 32 H -0.177 1.177 33 H 0.162 0.838 34 H 0.116 0.884 35 H 0.116 0.884 36 H 0.237 0.763 37 H 0.098 0.902 38 H 0.119 0.881 39 H 0.147 0.853 40 H 0.152 0.848 41 H 0.153 0.847 42 H 0.154 0.846 43 H 0.115 0.885 44 H 0.096 0.904 45 H 0.159 0.841 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.256 7.552 1.515 8.027 hybrid contribution 0.463 0.332 0.144 0.588 sum 2.719 7.885 1.659 8.504 Atomic orbital electron populations 1.86529 1.16930 1.81683 1.49242 1.25016 0.85380 1.09991 0.97077 0.94908 0.80923 0.77758 0.87611 1.20271 1.02492 0.94404 0.98213 1.20890 0.95187 0.93607 0.94661 1.21166 1.07867 0.93191 0.98076 1.96818 1.94687 1.04782 1.97591 1.18632 0.93055 0.90695 0.86406 1.86288 1.67990 1.36054 1.28164 1.22542 0.97986 0.94118 0.89504 1.19958 0.78480 0.88501 0.82819 1.90822 1.52625 1.16023 1.78070 1.45456 1.57200 1.13260 1.20549 1.21907 0.95038 0.96390 0.85052 0.87317 1.23443 0.96036 1.00291 0.97508 1.21649 0.97265 0.99631 0.90747 0.87965 1.19507 0.97437 0.92257 0.95169 1.21140 1.00761 0.97756 0.94851 1.21057 0.97465 0.97760 0.94235 1.21224 1.03673 0.91384 1.01403 1.17715 1.01708 0.81671 0.90592 1.91530 1.93500 1.46901 1.79785 1.20993 1.03598 0.99684 0.92843 1.23617 0.98447 0.99159 0.97026 1.21166 1.06954 0.92820 1.01052 1.20911 0.95018 0.99344 0.92444 0.77306 0.86716 1.18135 1.17737 0.83843 0.88351 0.88430 0.76278 0.90155 0.88106 0.85323 0.84841 0.84678 0.84608 0.88463 0.90366 0.84110 0.84605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.30 12.83 -35.23 -0.45 -0.15 16 2 C -0.06 0.08 2.80 36.00 0.10 0.18 16 3 Si 0.69 -1.60 29.80 -169.99 -5.07 -6.66 16 4 C -0.15 0.12 5.35 -104.61 -0.56 -0.44 16 5 C -0.02 -0.02 9.42 -39.58 -0.37 -0.39 16 6 C -0.12 -0.26 6.24 -39.38 -0.25 -0.50 16 7 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.34 16 8 C 0.16 0.15 6.68 -39.20 -0.26 -0.11 16 9 O -0.27 -0.51 9.00 -39.38 -0.35 -0.86 16 10 C 0.04 -0.09 5.22 36.00 0.19 0.10 16 11 C 0.52 0.04 7.91 -10.99 -0.09 -0.04 16 12 O -0.50 -2.72 16.10 -14.36 -0.23 -2.95 16 13 N -0.71 2.23 5.26 -52.93 -0.28 1.95 16 14 C 0.12 -0.26 4.33 -67.03 -0.29 -0.55 16 15 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 16 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 17 C -0.07 0.26 3.85 -90.96 -0.35 -0.09 16 18 H 0.10 -0.51 8.09 -51.93 -0.42 -0.93 16 19 C -0.04 0.07 5.29 -104.63 -0.55 -0.48 16 20 C -0.13 0.24 9.71 -39.58 -0.38 -0.15 16 21 C -0.09 0.12 10.04 -39.59 -0.40 -0.28 16 22 C -0.16 0.01 10.03 -39.51 -0.40 -0.39 16 23 C 0.10 0.12 7.30 -39.42 -0.29 -0.17 16 24 F -0.14 -0.39 17.27 2.25 0.04 -0.35 16 25 C -0.15 0.04 8.51 -39.52 -0.34 -0.29 16 26 C -0.14 0.34 7.27 -25.82 -0.19 0.16 16 27 C -0.20 0.39 9.04 -39.44 -0.36 0.04 16 28 C -0.06 0.13 8.66 -39.60 -0.34 -0.21 16 29 H 0.38 -1.69 8.70 45.56 0.40 -1.30 16 30 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H -0.26 0.04 7.11 56.52 0.40 0.44 16 32 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 33 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 34 H 0.10 -0.53 7.65 -51.93 -0.40 -0.92 16 35 H 0.10 -0.50 7.67 -51.93 -0.40 -0.90 16 36 H 0.40 -2.60 8.70 -40.82 -0.36 -2.96 16 37 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 38 H 0.10 -0.32 7.62 -51.93 -0.40 -0.71 16 39 H 0.13 -0.50 8.05 -52.49 -0.42 -0.92 16 40 H 0.13 -0.46 8.06 -52.48 -0.42 -0.88 16 41 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 42 H 0.14 -0.18 6.73 -52.49 -0.35 -0.53 16 43 H 0.10 -0.20 6.41 -51.93 -0.33 -0.53 16 44 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.14 -0.73 6.30 -52.49 -0.33 -1.06 16 46 H 0.14 -0.64 4.90 -52.48 -0.26 -0.90 16 LS Contribution 409.26 15.07 6.17 6.17 Total: 0.00 -10.60 409.26 -13.12 -23.72 By element: Atomic # 1 Polarization: -9.80 SS G_CDS: -5.38 Total: -15.18 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -5.31 Total: -3.33 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -0.28 Total: 1.95 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -1.04 Total: -3.97 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.07 Total: -6.66 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.60 -13.12 -23.72 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.275 kcal (2) G-P(sol) polarization free energy of solvation -10.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.871 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds