Wall clock time and date at job start Mon Mar 8 2021 02:16:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47077 * 2 1 4 4 C 1.50694 * 109.47460 * 120.00196 * 2 1 3 5 5 C 1.38247 * 119.94149 * 64.99935 * 4 2 1 6 6 C 1.38242 * 120.04652 * 180.02562 * 5 4 2 7 7 Br 1.89095 * 120.03383 * 179.97438 * 6 5 4 8 8 C 1.38789 * 119.92803 * 359.97438 * 6 5 4 9 9 O 1.35913 * 120.05991 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00268 * 180.02562 * 9 8 6 11 11 C 1.50696 * 109.47455 * 179.97438 * 10 9 8 12 12 O 1.21288 * 119.99865 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00223 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99912 * 179.97438 * 13 11 10 15 15 H 1.08997 * 112.85240 * 23.81203 * 14 13 11 16 16 C 1.53785 * 113.61412 * 155.00423 * 14 13 11 17 17 C 1.53776 * 87.08262 * 89.11616 * 16 14 13 18 18 H 1.08997 * 113.61747 * 270.80164 * 17 16 14 19 19 C 1.50701 * 113.61415 * 139.97832 * 17 16 14 20 20 C 1.38226 * 119.98168 * 121.52669 * 19 17 16 21 21 C 1.38265 * 120.04947 * 179.70260 * 20 19 17 22 22 C 1.38183 * 120.02475 * 0.28283 * 21 20 19 23 23 C 1.38478 * 119.97265 * 359.97438 * 22 21 20 24 24 F 1.35104 * 120.02290 * 180.02562 * 23 22 21 25 25 C 1.38221 * 119.99248 * 301.78882 * 19 17 16 26 26 C 1.53789 * 87.17183 * 25.39367 * 17 16 14 27 27 C 1.38723 * 119.88277 * 0.27956 * 8 6 5 28 28 C 1.38146 * 119.94959 * 359.46623 * 27 8 6 29 29 H 0.96701 * 113.99881 * 299.99619 * 1 2 3 30 30 H 1.09000 * 109.47373 * 240.00255 * 2 1 3 31 31 H 1.48497 * 110.00257 * 178.68234 * 3 2 1 32 32 H 1.48502 * 110.00126 * 300.00343 * 3 2 1 33 33 H 1.07995 * 119.97496 * 0.02562 * 5 4 2 34 34 H 1.08998 * 109.47491 * 59.99805 * 10 9 8 35 35 H 1.09000 * 109.46858 * 299.99728 * 10 9 8 36 36 H 0.96997 * 120.00230 * 0.02562 * 13 11 10 37 37 H 1.09003 * 113.61486 * 334.56408 * 16 14 13 38 38 H 1.09003 * 113.61701 * 203.67113 * 16 14 13 39 39 H 1.08002 * 119.97943 * 359.97438 * 20 19 17 40 40 H 1.08003 * 119.99150 * 180.30236 * 21 20 19 41 41 H 1.07995 * 120.01109 * 180.02562 * 22 21 20 42 42 H 1.08000 * 120.00673 * 0.02562 * 25 19 17 43 43 H 1.08994 * 113.61293 * 89.15839 * 26 17 16 44 44 H 1.09005 * 113.60922 * 220.06218 * 26 17 16 45 45 H 1.08000 * 120.02102 * 179.72813 * 27 8 6 46 46 H 1.08008 * 119.95820 * 180.25435 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0603 1.3970 6 6 2.1435 -2.7141 2.5251 7 35 1.8045 -4.5604 2.7531 8 6 2.8539 -2.0138 3.4902 9 8 3.3072 -2.6540 4.6001 10 6 4.0303 -1.8702 5.5513 11 6 4.4495 -2.7427 6.7062 12 8 4.1574 -3.9199 6.7143 13 7 5.1491 -2.2150 7.7303 14 6 5.5561 -3.0631 8.8533 15 1 5.6169 -4.1182 8.5866 16 6 6.7966 -2.5439 9.5994 17 6 5.8301 -1.7415 10.4865 18 1 5.6033 -0.7487 10.0982 19 6 6.2190 -1.7258 11.9424 20 6 6.4520 -0.5228 12.5821 21 6 6.8028 -0.5064 13.9194 22 6 6.9267 -1.6931 14.6164 23 6 6.6987 -2.8991 13.9751 24 9 6.8190 -4.0600 14.6556 25 6 6.3479 -2.9143 12.6360 26 6 4.7630 -2.7951 10.1454 27 6 3.0958 -0.6582 3.3225 28 6 2.6389 -0.0110 2.1907 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 3.5345 1.7703 0.0321 32 1 1.5614 2.4679 -1.2085 33 1 1.1317 -2.6045 0.6454 34 1 3.3937 -1.0647 5.9173 35 1 4.9149 -1.4467 5.0757 36 1 5.3824 -1.2735 7.7241 37 1 7.4460 -1.9199 8.9854 38 1 7.3398 -3.3211 10.1371 39 1 6.3556 0.4053 12.0382 40 1 6.9799 0.4343 14.4196 41 1 7.2004 -1.6800 15.6610 42 1 6.1703 -3.8543 12.1347 43 1 4.7492 -3.6409 10.8327 44 1 3.7730 -2.3733 9.9715 45 1 3.6445 -0.1102 4.0741 46 1 2.8308 1.0436 2.0581 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:16:09 Heat of formation + Delta-G solvation = -54.364975 kcal Electronic energy + Delta-G solvation = -31778.618232 eV Core-core repulsion = 26983.209626 eV Total energy + Delta-G solvation = -4795.408605 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -49.93041 -41.80448 -41.33724 -40.28939 -39.21230 -38.51850 -37.19063 -34.69937 -33.59349 -32.07567 -31.81142 -31.46978 -30.49496 -29.51949 -26.71132 -26.51739 -26.04517 -24.14804 -23.67432 -22.75845 -22.40435 -21.84724 -20.27967 -19.56266 -18.72382 -18.38801 -18.04783 -17.48781 -17.26311 -17.17624 -17.02710 -16.89308 -16.63809 -16.40541 -15.98111 -15.84870 -15.61915 -15.43521 -15.33282 -14.80790 -14.73516 -14.64525 -14.42461 -14.21347 -13.93661 -13.85816 -13.78886 -13.65499 -13.47564 -12.95633 -12.92065 -12.46891 -12.34623 -12.17249 -12.11959 -11.95593 -11.89481 -11.83067 -11.69534 -11.23038 -11.21489 -11.00849 -10.41564 -10.16238 -9.96665 -9.87690 -9.60397 -9.31342 -4.97128 -0.04422 0.12819 0.18121 0.23935 0.64879 1.34707 1.41002 1.45586 1.68071 2.03476 2.40751 2.50387 2.58613 3.23583 3.47351 3.48832 3.50497 3.64714 3.66117 3.69599 3.77529 3.82846 3.85204 3.95595 4.05180 4.07527 4.12487 4.13256 4.25185 4.30212 4.33893 4.43595 4.51452 4.62977 4.65775 4.75985 4.82536 4.85855 4.89593 4.94828 5.01221 5.01721 5.12422 5.13410 5.19790 5.24787 5.38267 5.47584 5.50999 5.63682 5.95395 6.08158 6.47355 6.80412 7.16473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.790 3.210 4 C -0.153 4.153 5 C -0.037 4.037 6 C -0.146 4.146 7 Br -0.057 7.057 8 C 0.149 3.851 9 O -0.307 6.307 10 C 0.032 3.968 11 C 0.513 3.487 12 O -0.570 6.570 13 N -0.690 5.690 14 C 0.116 3.884 15 H 0.078 0.922 16 C -0.125 4.125 17 C -0.061 4.061 18 H 0.131 0.869 19 C -0.046 4.046 20 C -0.123 4.123 21 C -0.091 4.091 22 C -0.170 4.170 23 C 0.069 3.931 24 F -0.157 7.157 25 C -0.162 4.162 26 C -0.146 4.146 27 C -0.187 4.187 28 C -0.052 4.052 29 H 0.396 0.604 30 H 0.103 0.897 31 H -0.276 1.276 32 H -0.305 1.305 33 H 0.133 0.867 34 H 0.137 0.863 35 H 0.133 0.867 36 H 0.424 0.576 37 H 0.098 0.902 38 H 0.092 0.908 39 H 0.158 0.842 40 H 0.156 0.844 41 H 0.139 0.861 42 H 0.135 0.865 43 H 0.086 0.914 44 H 0.074 0.926 45 H 0.184 0.816 46 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.045 13.477 2.541 14.048 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.186 4.186 3 Si 0.695 3.305 4 C -0.155 4.155 5 C -0.057 4.057 6 C -0.226 4.226 7 Br 0.028 6.972 8 C 0.101 3.899 9 O -0.219 6.219 10 C -0.045 4.045 11 C 0.300 3.700 12 O -0.448 6.448 13 N -0.344 5.344 14 C 0.011 3.989 15 H 0.096 0.904 16 C -0.163 4.163 17 C -0.079 4.079 18 H 0.149 0.851 19 C -0.046 4.046 20 C -0.141 4.141 21 C -0.108 4.108 22 C -0.189 4.189 23 C 0.050 3.950 24 F -0.136 7.136 25 C -0.180 4.180 26 C -0.185 4.185 27 C -0.206 4.206 28 C -0.070 4.070 29 H 0.246 0.754 30 H 0.120 0.880 31 H -0.202 1.202 32 H -0.234 1.234 33 H 0.151 0.849 34 H 0.154 0.846 35 H 0.151 0.849 36 H 0.262 0.738 37 H 0.117 0.883 38 H 0.110 0.890 39 H 0.176 0.824 40 H 0.174 0.826 41 H 0.157 0.843 42 H 0.153 0.847 43 H 0.104 0.896 44 H 0.093 0.907 45 H 0.201 0.799 46 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 3.262 11.945 1.762 12.507 hybrid contribution 0.144 -0.971 0.048 0.983 sum 3.406 10.974 1.810 11.632 Atomic orbital electron populations 1.86492 1.17408 1.82254 1.50511 1.25295 0.85260 1.11463 0.96579 0.93807 0.77791 0.73906 0.85004 1.20373 1.02669 0.93676 0.98780 1.20872 0.95875 0.94554 0.94400 1.21279 1.09885 0.91829 0.99558 1.96762 1.94958 1.07742 1.97707 1.18806 0.93229 0.91814 0.86048 1.86249 1.68691 1.38008 1.28966 1.22878 0.99818 0.93653 0.88141 1.20574 0.77741 0.87978 0.83746 1.90802 1.55449 1.18960 1.79556 1.45277 1.55731 1.14105 1.19283 1.21837 0.96329 0.95364 0.85405 0.90354 1.23370 0.95567 1.00190 0.97146 1.21685 0.96161 1.00510 0.89564 0.85084 1.19736 0.96986 0.91887 0.96036 1.21521 0.99189 0.98608 0.94746 1.21386 0.96801 0.97966 0.94687 1.21426 1.03936 0.91581 1.01927 1.18084 1.03806 0.81635 0.91437 1.91473 1.93910 1.47969 1.80250 1.21132 1.03761 1.00608 0.92525 1.23590 0.98707 0.99469 0.96712 1.21596 1.05906 0.91415 1.01716 1.21267 0.93498 1.00679 0.91557 0.75402 0.87973 1.20233 1.23394 0.84880 0.84592 0.84939 0.73764 0.88329 0.88962 0.82400 0.82618 0.84273 0.84707 0.89596 0.90683 0.79934 0.81440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.64 12.83 -148.98 -1.91 -1.27 16 2 C -0.08 0.22 2.80 71.23 0.20 0.42 16 3 Si 0.79 -4.97 29.80 68.60 2.04 -2.93 16 4 C -0.15 0.37 5.35 -19.85 -0.11 0.26 16 5 C -0.04 -0.10 9.42 22.27 0.21 0.11 16 6 C -0.15 -0.76 6.24 22.40 0.14 -0.62 16 7 Br -0.06 -0.55 33.16 -20.37 -0.68 -1.22 16 8 C 0.15 0.17 6.68 22.52 0.15 0.32 16 9 O -0.31 -1.05 9.00 -73.54 -0.66 -1.71 16 10 C 0.03 -0.23 5.22 71.23 0.37 0.14 16 11 C 0.51 -0.10 7.91 87.66 0.69 0.60 16 12 O -0.57 -7.36 16.10 15.98 0.26 -7.10 16 13 N -0.69 5.31 5.26 -439.75 -2.31 3.00 16 14 C 0.12 -0.49 4.33 45.58 0.20 -0.29 16 15 H 0.08 0.19 7.46 -2.39 -0.02 0.17 16 16 C -0.12 1.03 7.29 31.12 0.23 1.25 16 17 C -0.06 0.54 3.85 -11.01 -0.04 0.50 16 18 H 0.13 -1.86 8.09 -2.39 -0.02 -1.88 16 19 C -0.05 0.20 5.29 -19.87 -0.11 0.09 16 20 C -0.12 0.74 9.71 22.27 0.22 0.96 16 21 C -0.09 0.38 10.04 22.26 0.22 0.60 16 22 C -0.17 -0.06 10.03 22.31 0.22 0.16 16 23 C 0.07 0.27 7.30 22.37 0.16 0.43 16 24 F -0.16 -1.27 17.27 44.97 0.78 -0.50 16 25 C -0.16 -0.06 8.51 22.31 0.19 0.13 16 26 C -0.15 0.68 7.27 31.18 0.23 0.91 16 27 C -0.19 1.35 9.04 22.36 0.20 1.55 16 28 C -0.05 0.39 8.66 22.26 0.19 0.58 16 29 H 0.40 -3.82 8.70 -74.06 -0.64 -4.47 16 30 H 0.10 -0.08 7.96 -2.39 -0.02 -0.10 16 31 H -0.28 0.80 7.11 99.48 0.71 1.50 16 32 H -0.31 -0.80 7.11 99.48 0.71 -0.09 16 33 H 0.13 0.46 8.06 -2.91 -0.02 0.44 16 34 H 0.14 -2.03 7.65 -2.39 -0.02 -2.05 16 35 H 0.13 -1.90 7.67 -2.39 -0.02 -1.92 16 36 H 0.42 -6.94 8.70 -92.71 -0.81 -7.75 16 37 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 38 H 0.09 -0.56 7.62 -2.39 -0.02 -0.58 16 39 H 0.16 -1.89 8.05 -2.91 -0.02 -1.92 16 40 H 0.16 -1.42 8.06 -2.91 -0.02 -1.44 16 41 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 42 H 0.14 -0.07 6.73 -2.91 -0.02 -0.09 16 43 H 0.09 -0.21 6.41 -2.39 -0.02 -0.22 16 44 H 0.07 -0.29 8.14 -2.38 -0.02 -0.31 16 45 H 0.18 -2.96 6.30 -2.91 -0.02 -2.97 16 46 H 0.17 -2.34 4.90 -2.91 -0.01 -2.36 16 Total: 0.00 -31.79 409.26 0.74 -31.05 By element: Atomic # 1 Polarization: -27.07 SS G_CDS: -0.35 Total: -27.42 kcal Atomic # 6 Polarization: 4.53 SS G_CDS: 3.57 Total: 8.11 kcal Atomic # 7 Polarization: 5.31 SS G_CDS: -2.31 Total: 3.00 kcal Atomic # 8 Polarization: -7.77 SS G_CDS: -2.32 Total: -10.08 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 0.78 Total: -0.50 kcal Atomic # 14 Polarization: -4.97 SS G_CDS: 2.04 Total: -2.93 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.22 kcal Total: -31.79 0.74 -31.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.317 kcal (2) G-P(sol) polarization free energy of solvation -31.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.048 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds