Wall clock time and date at job start Mon Mar 8 2021 02:16:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35970 * 117.00255 * 2 1 4 4 C 1.39438 * 120.12349 * 179.97438 * 3 2 1 5 5 O 1.34783 * 133.24476 * 0.39591 * 4 3 2 6 6 C 1.34923 * 110.84323 * 180.09677 * 5 4 3 7 7 C 1.46994 * 125.13994 * 179.81299 * 6 5 4 8 8 O 1.21651 * 120.00128 * 179.69646 * 7 6 5 9 9 N 1.34777 * 119.99905 * 359.69850 * 7 6 5 10 10 C 1.46498 * 119.99813 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85100 * 336.19387 * 10 9 7 12 12 C 1.53775 * 113.61281 * 107.50334 * 10 9 7 13 13 C 1.53780 * 87.08253 * 89.11717 * 12 10 9 14 14 H 1.09004 * 113.68894 * 270.87581 * 13 12 10 15 15 C 1.50699 * 113.62078 * 139.98034 * 13 12 10 16 16 C 1.38176 * 119.98501 * 322.52876 * 15 13 12 17 17 C 1.38478 * 119.97514 * 179.97438 * 16 15 13 18 18 F 1.35104 * 120.02657 * 179.97438 * 17 16 15 19 19 C 1.38438 * 119.94879 * 359.74400 * 17 16 15 20 20 C 1.38219 * 119.97316 * 0.50956 * 19 17 16 21 21 C 1.38227 * 120.02402 * 359.46494 * 20 19 17 22 22 C 1.53784 * 87.08250 * 25.43230 * 13 12 10 23 23 C 1.35813 * 109.72175 * 359.55219 * 6 5 4 24 24 C 1.40614 * 119.13849 * 180.02562 * 4 3 2 25 25 C 1.39777 * 120.11800 * 0.02562 * 24 4 3 26 26 C 1.50699 * 120.09438 * 179.97438 * 25 24 4 27 27 O 1.42901 * 109.46657 * 284.99391 * 26 25 24 28 28 Si 1.86305 * 109.47248 * 164.99800 * 26 25 24 29 29 C 1.36636 * 119.81124 * 359.97438 * 25 24 4 30 30 C 1.38265 * 120.11460 * 0.02698 * 3 2 1 31 31 H 1.08999 * 109.47380 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47453 * 299.99789 * 1 2 3 33 33 H 1.08995 * 109.47366 * 59.99634 * 1 2 3 34 34 H 0.97003 * 119.99757 * 0.02562 * 9 7 6 35 35 H 1.08994 * 113.61714 * 334.56774 * 12 10 9 36 36 H 1.08999 * 113.61192 * 203.66066 * 12 10 9 37 37 H 1.08000 * 120.01275 * 359.97066 * 16 15 13 38 38 H 1.08004 * 120.01613 * 180.25245 * 19 17 16 39 39 H 1.08002 * 119.99072 * 179.75102 * 20 19 17 40 40 H 1.07999 * 119.97012 * 180.27779 * 21 20 19 41 41 H 1.08992 * 113.61669 * 89.11792 * 22 13 12 42 42 H 1.09000 * 113.61222 * 219.94235 * 22 13 12 43 43 H 1.08000 * 126.95742 * 180.24595 * 23 6 5 44 44 H 1.08997 * 109.47252 * 44.99478 * 26 25 24 45 45 H 0.96702 * 114.00463 * 300.00407 * 27 26 25 46 46 H 1.48492 * 109.99842 * 58.67678 * 28 26 25 47 47 H 1.48496 * 109.99730 * 179.97438 * 28 26 25 48 48 H 1.08001 * 119.74828 * 180.02562 * 29 25 24 49 49 H 1.07996 * 119.66197 * 359.95271 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3573 -0.0057 6 6 5.6316 0.9386 0.0004 7 6 6.9131 0.2184 0.0001 8 8 7.9595 0.8388 0.0003 9 7 6.9286 -1.1293 -0.0004 10 6 8.2057 -1.8470 -0.0012 11 1 9.0248 -1.2531 -0.4068 12 6 8.5356 -2.5187 1.3421 13 6 7.7808 -3.7529 0.8208 14 1 6.7142 -3.7413 1.0456 15 6 8.4401 -5.0599 1.1790 16 6 9.8181 -5.1618 1.1761 17 6 10.4237 -6.3627 1.5059 18 9 11.7710 -6.4636 1.5029 19 6 9.6477 -7.4583 1.8433 20 6 8.2693 -7.3555 1.8404 21 6 7.6660 -6.1561 1.5116 22 6 8.1168 -3.2619 -0.5973 23 6 5.4944 2.2898 0.0009 24 6 4.0554 2.5510 0.0011 25 6 3.2765 3.7117 0.0016 26 6 3.9381 5.0657 0.0028 27 8 4.4599 5.3396 1.3046 28 14 2.6865 6.3688 -0.4514 29 6 1.9136 3.6151 0.0011 30 6 1.2956 2.3726 0.0006 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3634 0.5139 -0.8899 34 1 6.0942 -1.6239 -0.0010 35 1 8.0563 -2.0430 2.1976 36 1 9.6012 -2.6907 1.4942 37 1 10.4226 -4.3052 0.9167 38 1 10.1190 -8.3943 2.1046 39 1 7.6636 -8.2112 2.0997 40 1 6.5890 -6.0755 1.5140 41 1 9.0677 -3.6369 -0.9754 42 1 7.2997 -3.3872 -1.3077 43 1 6.2874 3.0230 0.0015 44 1 4.7508 5.0736 -0.7235 45 1 3.7909 5.3483 2.0028 46 1 1.5576 6.3468 0.5130 47 1 3.3265 7.7088 -0.4532 48 1 1.3127 4.5126 0.0011 49 1 0.2173 2.3119 0.0002 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705262_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:16:23 Heat of formation + Delta-G solvation = -52.333800 kcal Electronic energy + Delta-G solvation = -35879.437644 eV Core-core repulsion = 30848.800647 eV Total energy + Delta-G solvation = -5030.636997 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.141 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -49.79352 -43.68510 -41.65933 -40.77138 -40.13138 -39.14851 -38.72260 -37.10767 -34.74122 -33.58193 -32.13699 -31.81097 -31.51949 -30.88109 -28.75349 -26.87076 -26.79059 -26.28149 -24.98938 -23.97843 -23.71478 -22.74500 -22.09932 -21.69015 -20.36313 -19.86127 -19.06061 -18.67277 -18.42095 -17.84728 -17.68837 -17.30987 -17.13077 -17.06430 -17.01280 -16.67499 -16.50421 -16.23944 -16.01754 -15.91260 -15.77155 -15.42870 -15.15811 -14.85162 -14.66579 -14.64418 -14.49643 -14.21050 -14.10174 -13.93964 -13.63377 -13.48584 -13.47639 -13.35189 -13.03069 -13.01044 -12.64866 -12.52311 -12.37319 -12.15528 -12.10537 -11.83086 -11.69434 -11.43413 -11.33074 -10.96215 -10.62767 -10.28309 -9.93364 -9.78922 -9.63364 -9.01461 -5.01443 -0.60867 0.09952 0.14365 0.19318 0.69311 1.19521 1.27363 1.50740 1.88500 1.90763 2.02440 2.02812 2.38364 2.52669 3.17427 3.19889 3.35230 3.35414 3.48796 3.51356 3.56020 3.58702 3.71935 3.81138 3.81896 3.85177 3.98513 4.00738 4.06510 4.06922 4.09446 4.16107 4.16801 4.34875 4.42799 4.45055 4.46194 4.51248 4.59607 4.68313 4.73789 4.81271 4.83616 4.87496 4.88415 4.97119 5.05113 5.05279 5.13496 5.21296 5.26208 5.30909 5.38813 5.51129 5.61669 5.89317 6.12928 6.30483 6.37691 6.91027 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.506 6.506 9 N -0.700 5.700 10 C 0.118 3.882 11 H 0.112 0.888 12 C -0.144 4.144 13 C -0.076 4.076 14 H 0.103 0.897 15 C -0.042 4.042 16 C -0.153 4.153 17 C 0.102 3.898 18 F -0.139 7.139 19 C -0.158 4.158 20 C -0.087 4.087 21 C -0.127 4.127 22 C -0.134 4.134 23 C -0.102 4.102 24 C -0.082 4.082 25 C -0.094 4.094 26 C -0.074 4.074 27 O -0.525 6.525 28 Si 0.692 3.308 29 C -0.096 4.096 30 C -0.177 4.177 31 H 0.105 0.895 32 H 0.060 0.940 33 H 0.061 0.939 34 H 0.409 0.591 35 H 0.078 0.922 36 H 0.099 0.901 37 H 0.137 0.863 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.129 0.871 41 H 0.102 0.898 42 H 0.081 0.919 43 H 0.175 0.825 44 H 0.119 0.881 45 H 0.375 0.625 46 H -0.258 1.258 47 H -0.255 1.255 48 H 0.140 0.860 49 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.869 -1.678 -1.880 8.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.391 3.609 8 O -0.382 6.382 9 N -0.351 5.351 10 C 0.013 3.987 11 H 0.130 0.870 12 C -0.182 4.182 13 C -0.094 4.094 14 H 0.121 0.879 15 C -0.042 4.042 16 C -0.171 4.171 17 C 0.083 3.917 18 F -0.117 7.117 19 C -0.177 4.177 20 C -0.105 4.105 21 C -0.145 4.145 22 C -0.172 4.172 23 C -0.123 4.123 24 C -0.083 4.083 25 C -0.095 4.095 26 C -0.183 4.183 27 O -0.331 6.331 28 Si 0.593 3.407 29 C -0.114 4.114 30 C -0.196 4.196 31 H 0.124 0.876 32 H 0.078 0.922 33 H 0.080 0.920 34 H 0.245 0.755 35 H 0.097 0.903 36 H 0.117 0.883 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.151 0.849 40 H 0.147 0.853 41 H 0.120 0.880 42 H 0.100 0.900 43 H 0.192 0.808 44 H 0.137 0.863 45 H 0.223 0.777 46 H -0.183 1.183 47 H -0.180 1.180 48 H 0.158 0.842 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.866 -0.981 -1.969 7.210 hybrid contribution -0.369 -0.522 1.283 1.433 sum -7.235 -1.503 -0.687 7.421 Atomic orbital electron populations 1.23189 0.77304 1.04764 1.01805 1.86170 1.22163 1.25685 1.88370 1.17741 0.86498 0.85885 0.99418 1.18770 0.87433 0.86961 1.07018 1.84047 1.12648 1.34728 1.76146 1.21929 0.83839 0.92586 1.09126 1.16594 0.85454 0.82040 0.76793 1.90928 1.30310 1.67385 1.49584 1.45561 1.09760 1.05580 1.74205 1.21944 0.86541 0.92828 0.97414 0.87044 1.23590 1.01721 0.95113 0.97824 1.21664 0.99977 0.90888 0.96911 0.87888 1.19504 0.92321 0.95133 0.97291 1.20996 0.95207 0.97026 1.03887 1.17709 0.77068 0.95107 1.01847 1.91527 1.29360 1.96759 1.94100 1.21216 0.94545 0.98516 1.03444 1.21052 0.93711 0.98055 0.97699 1.21153 1.00321 0.92533 1.00463 1.23438 1.03861 0.93953 0.95973 1.22759 0.94786 0.94316 1.00406 1.19407 0.92614 0.92055 1.04211 1.19406 0.92814 0.94335 1.02961 1.25032 1.06865 0.97939 0.88485 1.86642 1.37580 1.92665 1.16235 0.94898 0.77533 0.77905 0.90398 1.20592 0.93488 0.97815 0.99484 1.20971 1.00367 0.90534 1.07754 0.87633 0.92167 0.92004 0.75542 0.90313 0.88288 0.84568 0.84699 0.84856 0.85303 0.87975 0.90048 0.80773 0.86324 0.77707 1.18328 1.17955 0.84234 0.83492 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.29 10.50 -19.64 -0.21 -0.50 16 3 C 0.15 0.19 6.70 -39.12 -0.26 -0.07 16 4 C 0.05 0.13 7.35 -38.24 -0.28 -0.16 16 5 O -0.17 -0.48 10.28 2.65 0.03 -0.46 16 6 C -0.02 -0.07 7.07 -36.90 -0.26 -0.33 16 7 C 0.61 1.65 7.80 -12.71 -0.10 1.55 16 8 O -0.51 -2.85 16.42 5.23 0.09 -2.77 16 9 N -0.70 0.07 5.26 -54.23 -0.29 -0.22 16 10 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 12 C -0.14 0.17 7.25 -25.92 -0.19 -0.02 16 13 C -0.08 0.15 3.86 -90.96 -0.35 -0.20 16 14 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 15 C -0.04 0.02 5.29 -104.64 -0.55 -0.53 16 16 C -0.15 -0.06 8.59 -39.52 -0.34 -0.40 16 17 C 0.10 0.18 7.30 -39.42 -0.29 -0.11 16 18 F -0.14 -0.45 17.27 2.25 0.04 -0.41 16 19 C -0.16 -0.09 10.03 -39.51 -0.40 -0.49 16 20 C -0.09 0.05 10.04 -39.59 -0.40 -0.35 16 21 C -0.13 0.10 9.71 -39.58 -0.38 -0.28 16 22 C -0.13 0.30 7.29 -25.91 -0.19 0.11 16 23 C -0.10 -0.27 10.68 -37.23 -0.40 -0.67 16 24 C -0.08 -0.18 6.16 -105.21 -0.65 -0.83 16 25 C -0.09 -0.04 5.26 -104.63 -0.55 -0.59 16 26 C -0.07 0.02 2.71 36.01 0.10 0.11 16 27 O -0.53 -0.68 12.88 -35.23 -0.45 -1.13 16 28 Si 0.69 -1.11 30.25 -169.99 -5.14 -6.25 16 29 C -0.10 0.10 8.62 -39.96 -0.34 -0.25 16 30 C -0.18 0.17 9.03 -39.38 -0.36 -0.18 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 32 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 33 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 34 H 0.41 -0.70 8.42 -40.82 -0.34 -1.04 16 35 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.10 -0.14 6.31 -51.93 -0.33 -0.47 16 37 H 0.14 -0.10 6.66 -52.49 -0.35 -0.45 16 38 H 0.14 -0.09 8.06 -52.48 -0.42 -0.52 16 39 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 40 H 0.13 -0.33 8.05 -52.49 -0.42 -0.75 16 41 H 0.10 -0.24 7.72 -51.93 -0.40 -0.64 16 42 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 43 H 0.17 0.36 8.06 -52.49 -0.42 -0.07 16 44 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 45 H 0.38 -0.63 8.70 45.56 0.40 -0.24 16 46 H -0.26 0.11 6.69 56.52 0.38 0.48 16 47 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 48 H 0.14 -0.41 4.81 -52.49 -0.25 -0.66 16 49 H 0.15 -0.54 6.26 -52.49 -0.33 -0.87 16 LS Contribution 415.89 15.07 6.27 6.27 Total: 0.00 -8.55 415.89 -10.96 -19.51 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -5.80 Total: -10.90 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -5.49 Total: -3.14 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.29 Total: -0.22 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -0.55 Total: -4.85 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.14 Total: -6.25 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -8.55 -10.96 -19.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.825 kcal (2) G-P(sol) polarization free energy of solvation -8.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.959 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds