Wall clock time and date at job start Mon Mar 8 2021 02:16:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37943 * 120.07432 * 2 1 4 4 C 1.38372 * 120.14852 * 179.97438 * 3 2 1 5 5 C 1.50704 * 119.85781 * 180.02562 * 4 3 2 6 6 C 1.38339 * 120.29068 * 0.05163 * 4 3 2 7 7 C 1.50700 * 119.92881 * 179.97438 * 6 4 3 8 8 O 1.42907 * 109.46875 * 285.02155 * 7 6 4 9 9 Si 1.86299 * 109.47556 * 165.02156 * 7 6 4 10 10 C 1.37982 * 120.14766 * 359.97438 * 6 4 3 11 11 C 1.39558 * 119.84728 * 359.97438 * 10 6 4 12 12 C 1.47850 * 120.14069 * 179.72581 * 11 10 6 13 13 O 1.21545 * 120.00232 * 173.74419 * 12 11 10 14 14 N 1.34781 * 119.99876 * 353.74165 * 12 11 10 15 15 C 1.46497 * 119.99598 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.85248 * 336.19780 * 15 14 12 17 17 C 1.53782 * 113.61254 * 107.51024 * 15 14 12 18 18 C 1.53774 * 87.08455 * 89.11269 * 17 15 14 19 19 H 1.09004 * 113.61333 * 270.88565 * 18 17 15 20 20 C 1.50699 * 113.69318 * 139.99414 * 18 17 15 21 21 C 1.38184 * 119.98368 * 322.19137 * 20 18 17 22 22 C 1.38478 * 119.97194 * 179.72758 * 21 20 18 23 23 F 1.35095 * 120.02560 * 180.25047 * 22 21 20 24 24 C 1.38443 * 119.94724 * 0.54919 * 22 21 20 25 25 C 1.38217 * 119.97617 * 359.72080 * 24 22 21 26 26 C 1.38222 * 120.02615 * 0.02562 * 25 24 22 27 27 C 1.53782 * 113.61229 * 205.00277 * 15 14 12 28 28 H 1.08998 * 109.46737 * 263.33469 * 1 2 3 29 29 H 1.09005 * 109.47000 * 23.33283 * 1 2 3 30 30 H 1.09003 * 109.47077 * 143.32904 * 1 2 3 31 31 H 1.07998 * 119.92254 * 0.05152 * 3 2 1 32 32 H 1.09001 * 109.46712 * 270.02605 * 5 4 3 33 33 H 1.08995 * 109.46888 * 30.01789 * 5 4 3 34 34 H 1.08991 * 109.47318 * 150.02406 * 5 4 3 35 35 H 1.09003 * 109.47417 * 45.01897 * 7 6 4 36 36 H 0.96697 * 114.00202 * 299.99566 * 8 7 6 37 37 H 1.48502 * 110.00386 * 180.02562 * 9 7 6 38 38 H 1.48503 * 109.99685 * 301.31610 * 9 7 6 39 39 H 1.07998 * 120.07635 * 180.02562 * 10 6 4 40 40 H 0.96995 * 120.00030 * 0.02562 * 14 12 11 41 41 H 1.09006 * 113.61264 * 203.66302 * 17 15 14 42 42 H 1.08999 * 113.61033 * 334.56004 * 17 15 14 43 43 H 1.08000 * 120.01371 * 359.97438 * 21 20 18 44 44 H 1.08000 * 120.01162 * 179.75372 * 24 22 21 45 45 H 1.07999 * 119.98604 * 180.02562 * 25 24 22 46 46 H 1.07995 * 119.97761 * 179.97438 * 26 25 24 47 47 H 1.08999 * 113.61895 * 25.43197 * 27 15 14 48 48 H 1.09003 * 113.61358 * 156.33695 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5820 1.1955 0.0005 5 6 4.3306 2.5035 0.0011 6 6 4.2813 0.0019 0.0000 7 6 5.7883 0.0134 0.0000 8 8 6.2619 0.3668 -1.3012 9 14 6.4223 -1.6788 0.4532 10 6 3.6021 -1.1992 -0.0005 11 6 2.2065 -1.2079 0.0000 12 6 1.4722 -2.4912 -0.0067 13 8 0.2622 -2.4996 0.1085 14 7 2.1445 -3.6516 -0.1406 15 6 1.4169 -4.9231 -0.1466 16 1 0.4525 -4.8614 0.3576 17 6 1.3484 -5.5871 -1.5320 18 6 2.6717 -6.2848 -1.1762 19 1 3.5562 -5.7110 -1.4531 20 6 2.7402 -7.7205 -1.6291 21 6 1.6158 -8.5208 -1.5600 22 6 1.6775 -9.8384 -1.9816 23 9 0.5776 -10.6204 -1.9192 24 6 2.8688 -10.3555 -2.4612 25 6 3.9936 -9.5547 -2.5242 26 6 3.9295 -8.2382 -2.1080 27 6 2.2694 -6.1228 0.2992 28 1 -0.3633 -0.1193 1.0207 29 1 -0.3633 0.9437 -0.4070 30 1 -0.3633 -0.8243 -0.6138 31 1 1.6582 2.1290 0.0008 32 1 4.5110 2.8192 -1.0264 33 1 3.7386 3.2606 0.5151 34 1 5.2834 2.3766 0.5149 35 1 6.1461 0.7422 0.7272 36 1 5.9812 -0.2397 -2.0001 37 1 7.9073 -1.6805 0.4573 38 1 5.9107 -2.0713 1.7909 39 1 4.1492 -2.1303 -0.0005 40 1 3.1101 -3.6449 -0.2321 41 1 0.5096 -6.2738 -1.6462 42 1 1.4351 -4.8820 -2.3588 43 1 0.6883 -8.1177 -1.1811 44 1 2.9191 -11.3841 -2.7865 45 1 4.9229 -9.9578 -2.8987 46 1 4.8089 -7.6133 -2.1572 47 1 3.0997 -5.8505 0.9508 48 1 1.6824 -6.9560 0.6858 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705262_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:16:43 Heat of formation + Delta-G solvation = -30.596839 kcal Electronic energy + Delta-G solvation = -30932.187657 eV Core-core repulsion = 26640.772292 eV Total energy + Delta-G solvation = -4291.415366 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.157 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -49.90384 -41.88710 -41.02292 -39.89554 -38.66670 -37.54207 -34.97885 -34.39206 -33.19306 -31.72431 -31.42528 -29.30434 -28.57473 -26.66461 -26.28804 -25.53735 -23.90834 -23.61350 -22.96604 -22.29994 -21.05403 -20.13388 -19.12066 -18.45964 -17.46261 -17.39760 -17.22673 -16.99804 -16.63260 -16.59920 -16.39439 -16.19871 -16.11144 -15.70942 -15.40328 -15.20127 -14.79375 -14.72420 -14.58243 -14.45594 -14.21295 -14.06202 -13.90195 -13.81874 -13.46570 -13.41919 -13.07662 -12.94534 -12.89656 -12.80140 -12.61467 -12.50540 -12.39916 -12.12830 -11.88940 -11.81846 -11.64591 -11.16084 -10.71189 -10.40297 -10.15714 -9.88984 -9.84469 -9.60992 -9.56588 -5.06587 -0.25008 0.17696 0.21543 0.27467 1.29940 1.64217 1.75317 1.99291 2.04127 2.61820 2.65732 3.26866 3.45637 3.51771 3.52074 3.64393 3.69097 3.73466 3.76159 3.81394 3.86835 4.00649 4.10852 4.15512 4.20284 4.29380 4.33768 4.45250 4.47083 4.51038 4.57249 4.66654 4.69593 4.76173 4.80213 4.80443 4.85827 4.91911 4.93012 4.98293 5.04431 5.06854 5.12402 5.16575 5.17317 5.22570 5.27403 5.42528 5.48600 5.50575 5.55853 5.68822 5.80435 5.98806 6.49037 6.80399 7.17956 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.026 4.026 3 C -0.137 4.137 4 C -0.033 4.033 5 C -0.119 4.119 6 C -0.139 4.139 7 C -0.072 4.072 8 O -0.550 6.550 9 Si 0.767 3.233 10 C -0.062 4.062 11 C -0.157 4.157 12 C 0.560 3.440 13 O -0.562 6.562 14 N -0.696 5.696 15 C 0.116 3.884 16 H 0.085 0.915 17 C -0.144 4.144 18 C -0.065 4.065 19 H 0.131 0.869 20 C -0.045 4.045 21 C -0.161 4.161 22 C 0.069 3.931 23 F -0.157 7.157 24 C -0.171 4.171 25 C -0.091 4.091 26 C -0.123 4.123 27 C -0.128 4.128 28 H 0.068 0.932 29 H 0.072 0.928 30 H 0.079 0.921 31 H 0.143 0.857 32 H 0.082 0.918 33 H 0.075 0.925 34 H 0.071 0.929 35 H 0.109 0.891 36 H 0.395 0.605 37 H -0.296 1.296 38 H -0.283 1.283 39 H 0.155 0.845 40 H 0.415 0.585 41 H 0.089 0.911 42 H 0.074 0.926 43 H 0.137 0.863 44 H 0.139 0.861 45 H 0.155 0.845 46 H 0.159 0.841 47 H 0.095 0.905 48 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.811 0.152 -1.921 6.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.027 4.027 3 C -0.155 4.155 4 C -0.034 4.034 5 C -0.176 4.176 6 C -0.140 4.140 7 C -0.181 4.181 8 O -0.357 6.357 9 Si 0.673 3.327 10 C -0.080 4.080 11 C -0.160 4.160 12 C 0.349 3.651 13 O -0.443 6.443 14 N -0.348 5.348 15 C 0.010 3.990 16 H 0.103 0.897 17 C -0.183 4.183 18 C -0.083 4.083 19 H 0.149 0.851 20 C -0.045 4.045 21 C -0.180 4.180 22 C 0.050 3.950 23 F -0.136 7.136 24 C -0.190 4.190 25 C -0.109 4.109 26 C -0.141 4.141 27 C -0.166 4.166 28 H 0.086 0.914 29 H 0.091 0.909 30 H 0.098 0.902 31 H 0.160 0.840 32 H 0.101 0.899 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.127 0.873 36 H 0.245 0.755 37 H -0.224 1.224 38 H -0.209 1.209 39 H 0.172 0.828 40 H 0.253 0.747 41 H 0.108 0.892 42 H 0.093 0.907 43 H 0.155 0.845 44 H 0.156 0.844 45 H 0.173 0.827 46 H 0.177 0.823 47 H 0.113 0.887 48 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 5.643 0.111 -0.946 5.722 hybrid contribution -0.453 0.254 0.259 0.580 sum 5.190 0.364 -0.687 5.248 Atomic orbital electron populations 1.21023 0.90233 1.03232 1.02995 1.20212 0.96915 0.92054 0.93542 1.21165 0.93681 0.98012 1.02669 1.20218 0.93468 0.95989 0.93680 1.20930 1.00030 0.93146 1.03465 1.20200 0.96608 0.92795 1.04389 1.25173 0.91026 1.12466 0.89463 1.86495 1.75920 1.56840 1.16489 0.94229 0.77557 0.78034 0.82893 1.21178 0.92261 0.97902 0.96645 1.19656 0.93818 0.92696 1.09820 1.18408 0.86756 0.84356 0.75613 1.90744 1.15262 1.87423 1.50828 1.45456 1.11296 1.04424 1.73614 1.21841 0.96708 0.82602 0.97829 0.89680 1.23550 0.97939 0.99419 0.97354 1.21714 0.99625 0.90924 0.96007 0.85067 1.19722 0.92337 0.95651 0.96766 1.21142 1.01098 0.92113 1.03602 1.18076 0.83583 0.90007 1.03303 1.91468 1.52834 1.74746 1.94564 1.21420 0.92244 1.02218 1.03086 1.21374 0.98223 0.93851 0.97441 1.21535 0.98383 0.95792 0.98365 1.23404 1.00382 0.96761 0.96078 0.91374 0.90947 0.90206 0.83955 0.89919 0.90583 0.91022 0.87320 0.75503 1.22356 1.20945 0.82763 0.74700 0.89244 0.90698 0.84548 0.84359 0.82698 0.82305 0.88664 0.88671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.51 8.74 71.24 0.62 0.11 16 2 C -0.03 -0.08 5.91 -19.61 -0.12 -0.20 16 3 C -0.14 -0.10 9.31 22.23 0.21 0.10 16 4 C -0.03 0.01 5.89 -19.81 -0.12 -0.10 16 5 C -0.12 0.29 9.53 71.24 0.68 0.97 16 6 C -0.14 0.35 5.26 -19.90 -0.10 0.24 16 7 C -0.07 0.29 2.04 71.24 0.15 0.43 16 8 O -0.55 2.10 12.80 -148.98 -1.91 0.20 16 9 Si 0.77 -4.87 29.91 68.60 2.05 -2.81 16 10 C -0.06 0.24 8.13 22.53 0.18 0.43 16 11 C -0.16 -0.21 5.87 -20.09 -0.12 -0.33 16 12 C 0.56 1.76 7.70 86.79 0.67 2.43 16 13 O -0.56 -5.97 12.95 -3.86 -0.05 -6.02 16 14 N -0.70 2.83 5.21 -442.91 -2.31 0.52 16 15 C 0.12 -0.39 4.32 45.52 0.20 -0.19 16 16 H 0.09 0.15 7.46 -2.39 -0.02 0.14 16 17 C -0.14 0.64 7.25 31.12 0.23 0.87 16 18 C -0.06 0.53 3.85 -11.01 -0.04 0.48 16 19 H 0.13 -1.76 8.09 -2.38 -0.02 -1.78 16 20 C -0.04 0.18 5.29 -19.87 -0.11 0.08 16 21 C -0.16 -0.05 8.58 22.31 0.19 0.14 16 22 C 0.07 0.27 7.30 22.38 0.16 0.43 16 23 F -0.16 -1.26 17.27 44.97 0.78 -0.48 16 24 C -0.17 -0.09 10.03 22.31 0.22 0.13 16 25 C -0.09 0.36 10.04 22.26 0.22 0.58 16 26 C -0.12 0.71 9.71 22.27 0.22 0.93 16 27 C -0.13 0.94 7.29 31.12 0.23 1.17 16 28 H 0.07 0.39 8.14 -2.39 -0.02 0.37 16 29 H 0.07 0.07 8.04 -2.38 -0.02 0.05 16 30 H 0.08 0.64 5.85 -2.39 -0.01 0.63 16 31 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 32 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.08 -0.30 8.08 -2.39 -0.02 -0.32 16 34 H 0.07 -0.17 6.22 -2.39 -0.01 -0.19 16 35 H 0.11 -0.29 6.48 -2.39 -0.02 -0.31 16 36 H 0.40 -4.67 8.70 -74.06 -0.64 -5.32 16 37 H -0.30 -0.45 7.11 99.48 0.71 0.26 16 38 H -0.28 0.33 7.11 99.48 0.71 1.04 16 39 H 0.16 -1.71 3.52 -2.91 -0.01 -1.72 16 40 H 0.41 -4.54 6.78 -92.71 -0.63 -5.17 16 41 H 0.09 -0.27 6.33 -2.38 -0.02 -0.28 16 42 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 43 H 0.14 -0.12 6.68 -2.91 -0.02 -0.14 16 44 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 45 H 0.16 -1.35 8.06 -2.91 -0.02 -1.38 16 46 H 0.16 -1.87 8.05 -2.91 -0.02 -1.89 16 47 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 48 H 0.09 -0.56 7.71 -2.39 -0.02 -0.57 16 Total: 0.00 -20.41 389.14 1.92 -18.49 By element: Atomic # 1 Polarization: -18.38 SS G_CDS: -0.21 Total: -18.59 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: 3.57 Total: 8.70 kcal Atomic # 7 Polarization: 2.83 SS G_CDS: -2.31 Total: 0.52 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.96 Total: -5.83 kcal Atomic # 9 Polarization: -1.26 SS G_CDS: 0.78 Total: -0.48 kcal Atomic # 14 Polarization: -4.87 SS G_CDS: 2.05 Total: -2.81 kcal Total: -20.41 1.92 -18.49 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705262_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.104 kcal (2) G-P(sol) polarization free energy of solvation -20.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds