Wall clock time and date at job start Mon Mar 8 2021 02:16:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42898 * 109.47009 * 2 1 4 4 C 1.35895 * 117.00009 * 84.95164 * 3 2 1 5 5 C 1.38738 * 120.05804 * 174.27720 * 4 3 2 6 6 C 1.38140 * 119.94543 * 179.70113 * 5 4 3 7 7 C 1.38270 * 120.05347 * 0.59337 * 6 5 4 8 8 C 1.50704 * 119.94074 * 179.70478 * 7 6 5 9 9 O 1.42900 * 109.47212 * 119.97984 * 8 7 6 10 10 Si 1.86298 * 109.47400 * 359.97438 * 8 7 6 11 11 C 1.38264 * 120.11376 * 359.67652 * 7 6 5 12 12 C 1.38144 * 120.05582 * 0.02940 * 11 7 6 13 13 C 1.50700 * 109.47223 * 240.00203 * 2 1 3 14 14 O 1.21278 * 120.00411 * 115.00098 * 13 2 1 15 15 N 1.34784 * 119.99877 * 294.99792 * 13 2 1 16 16 C 1.46497 * 120.00105 * 179.72167 * 15 13 2 17 17 H 1.08998 * 112.84524 * 24.08203 * 16 15 13 18 18 C 1.53782 * 113.61284 * 155.27680 * 16 15 13 19 19 C 1.53777 * 87.08034 * 89.11715 * 18 16 15 20 20 H 1.08994 * 113.61772 * 270.80131 * 19 18 16 21 21 C 1.50702 * 113.61312 * 139.97859 * 19 18 16 22 22 C 1.38208 * 119.99972 * 119.99844 * 21 19 18 23 23 C 1.38260 * 120.00143 * 180.02562 * 22 21 19 24 24 C 1.50699 * 120.00056 * 179.97438 * 23 22 21 25 25 F 1.39902 * 109.47145 * 89.99987 * 24 23 22 26 26 F 1.39901 * 109.47022 * 209.99775 * 24 23 22 27 27 F 1.39902 * 109.47271 * 329.99981 * 24 23 22 28 28 C 1.38213 * 119.99735 * 359.97438 * 23 22 21 29 29 C 1.38250 * 120.00386 * 359.97438 * 28 23 22 30 30 C 1.38221 * 119.99975 * 359.80557 * 29 28 23 31 31 C 1.53771 * 113.61666 * 252.77557 * 16 15 13 32 32 H 1.09005 * 109.47217 * 59.99871 * 1 2 3 33 33 H 1.09003 * 109.47293 * 180.02562 * 1 2 3 34 34 H 1.08994 * 109.47059 * 299.99857 * 1 2 3 35 35 H 1.08997 * 109.46947 * 120.00119 * 2 1 3 36 36 H 1.08003 * 120.02395 * 359.97438 * 5 4 3 37 37 H 1.08002 * 119.97217 * 180.27347 * 6 5 4 38 38 H 1.09006 * 109.46990 * 239.97481 * 8 7 6 39 39 H 0.96705 * 113.99679 * 299.99492 * 9 8 7 40 40 H 1.48502 * 109.99794 * 58.68087 * 10 8 7 41 41 H 1.48503 * 110.00025 * 180.02562 * 10 8 7 42 42 H 1.07995 * 119.97292 * 179.97438 * 11 7 6 43 43 H 1.07999 * 120.03201 * 179.97438 * 12 11 7 44 44 H 0.96997 * 119.99467 * 0.02562 * 15 13 2 45 45 H 1.09007 * 113.61119 * 203.66823 * 18 16 15 46 46 H 1.09006 * 113.61411 * 334.56874 * 18 16 15 47 47 H 1.07998 * 120.00162 * 359.97438 * 22 21 19 48 48 H 1.08006 * 119.99791 * 179.97438 * 28 23 22 49 49 H 1.08000 * 120.00218 * 179.97438 * 29 28 23 50 50 H 1.07994 * 120.00379 * 180.23220 * 30 29 28 51 51 H 1.09005 * 113.61854 * 25.43468 * 31 16 15 52 52 H 1.09004 * 113.61750 * 156.33239 * 31 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1115 1.9645 1.2061 5 6 2.6775 3.2281 1.2931 6 6 2.7777 3.8559 2.5195 7 6 2.3255 3.2209 3.6615 8 6 2.4421 3.9054 4.9990 9 8 1.1407 4.0658 5.5671 10 14 3.2319 5.5776 4.7742 11 6 1.7660 1.9592 3.5783 12 6 1.6581 1.3296 2.3534 13 6 2.0323 -0.7104 -1.2305 14 8 2.6530 -0.0979 -2.0734 15 7 1.7919 -2.0264 -1.3942 16 6 2.2750 -2.7157 -2.5932 17 1 3.1292 -2.2180 -3.0522 18 6 2.4757 -4.2275 -2.3959 19 6 1.0087 -4.3986 -2.8238 20 1 0.3031 -4.3472 -1.9946 21 6 0.7754 -5.5892 -3.7177 22 6 -0.0882 -6.5926 -3.3209 23 6 -0.3017 -7.6852 -4.1408 24 6 -1.2430 -8.7796 -3.7079 25 9 -2.5359 -8.4866 -4.1548 26 9 -0.8253 -9.9975 -4.2551 27 9 -1.2416 -8.8707 -2.3118 28 6 0.3480 -7.7737 -5.3574 29 6 1.2111 -6.7695 -5.7549 30 6 1.4212 -5.6750 -4.9373 31 6 1.1597 -3.0735 -3.5895 32 1 -0.3634 0.5139 -0.8900 33 1 -0.3634 -1.0277 0.0005 34 1 -0.3633 0.5138 0.8900 35 1 1.8933 -0.5138 0.8900 36 1 3.0356 3.7223 0.4021 37 1 3.2143 4.8414 2.5871 38 1 3.0569 3.2997 5.6648 39 1 0.5384 4.5956 5.0270 40 1 2.4199 6.4018 3.8433 41 1 3.3531 6.2626 6.0862 42 1 1.4140 1.4652 4.4718 43 1 1.2214 0.3440 2.2889 44 1 1.2952 -2.5162 -0.7202 45 1 3.1883 -4.6681 -3.0933 46 1 2.6646 -4.5115 -1.3605 47 1 -0.5956 -6.5237 -2.3701 48 1 0.1815 -8.6274 -5.9977 49 1 1.7192 -6.8389 -6.7054 50 1 2.0925 -4.8887 -5.2493 51 1 0.2858 -2.4258 -3.5180 52 1 1.5122 -3.1986 -4.6134 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:16:56 Heat of formation + Delta-G solvation = -163.218242 kcal Electronic energy + Delta-G solvation = -39066.412503 eV Core-core repulsion = 33356.118480 eV Total energy + Delta-G solvation = -5710.294023 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.154 amu Computer time = 1.86 seconds Orbital eigenvalues (eV) -51.23048 -48.75312 -48.70792 -41.95860 -41.36782 -40.45973 -39.35627 -38.67217 -37.26324 -34.98199 -33.32236 -32.75737 -32.10367 -31.93099 -31.25733 -27.15973 -26.86037 -26.64329 -26.43355 -25.25922 -24.13159 -23.43375 -22.78132 -22.35470 -21.50650 -20.44205 -19.56506 -19.49598 -19.42470 -18.99074 -18.58942 -18.26021 -17.38624 -17.27011 -16.84544 -16.73525 -16.38865 -16.29173 -16.17088 -16.01457 -15.71871 -15.60349 -15.57551 -15.42497 -15.22422 -15.16624 -14.98505 -14.86838 -14.78566 -14.70528 -14.48189 -14.31735 -14.29052 -14.21517 -13.78338 -13.64555 -13.41567 -13.37718 -13.33933 -13.20965 -12.93373 -12.88208 -12.40065 -12.26699 -12.20377 -12.00866 -11.87252 -11.76708 -11.60006 -11.26826 -10.94515 -10.59567 -10.23162 -10.14907 -10.03648 -9.79508 -9.22241 -4.91337 -0.08695 0.23179 0.24766 0.33022 1.33354 1.38617 1.47387 1.60568 1.61306 1.96040 2.42981 2.47769 2.65061 2.67887 2.95834 3.35015 3.42333 3.44128 3.44640 3.63892 3.65321 3.69861 3.72795 3.82418 3.84915 3.86605 3.92920 3.95081 4.07510 4.10117 4.24618 4.27409 4.35765 4.39339 4.55090 4.58171 4.61507 4.64866 4.65758 4.70289 4.78013 4.84589 4.90201 4.95527 4.99891 5.03297 5.08042 5.12674 5.17443 5.19249 5.29340 5.31908 5.41645 5.48404 5.59765 5.68542 5.78272 6.25659 6.43988 6.50116 7.08617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.064 3.936 3 O -0.312 6.312 4 C 0.120 3.880 5 C -0.160 4.160 6 C -0.077 4.077 7 C -0.158 4.158 8 C -0.072 4.072 9 O -0.548 6.548 10 Si 0.755 3.245 11 C -0.056 4.056 12 C -0.207 4.207 13 C 0.520 3.480 14 O -0.567 6.567 15 N -0.691 5.691 16 C 0.114 3.886 17 H 0.086 0.914 18 C -0.123 4.123 19 C -0.067 4.067 20 H 0.116 0.884 21 C -0.073 4.073 22 C -0.076 4.076 23 C -0.194 4.194 24 C 0.506 3.494 25 F -0.185 7.185 26 F -0.183 7.183 27 F -0.181 7.181 28 C -0.087 4.087 29 C -0.118 4.118 30 C -0.086 4.086 31 C -0.142 4.142 32 H 0.059 0.941 33 H 0.110 0.890 34 H 0.083 0.917 35 H 0.127 0.873 36 H 0.135 0.865 37 H 0.147 0.853 38 H 0.127 0.873 39 H 0.385 0.615 40 H -0.286 1.286 41 H -0.303 1.303 42 H 0.140 0.860 43 H 0.155 0.845 44 H 0.419 0.581 45 H 0.105 0.895 46 H 0.091 0.909 47 H 0.143 0.857 48 H 0.139 0.861 49 H 0.155 0.845 50 H 0.152 0.848 51 H 0.070 0.930 52 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.452 -2.370 0.696 2.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.005 3.995 3 O -0.225 6.225 4 C 0.075 3.925 5 C -0.178 4.178 6 C -0.094 4.094 7 C -0.159 4.159 8 C -0.182 4.182 9 O -0.356 6.356 10 Si 0.662 3.338 11 C -0.074 4.074 12 C -0.226 4.226 13 C 0.306 3.694 14 O -0.444 6.444 15 N -0.345 5.345 16 C 0.009 3.991 17 H 0.104 0.896 18 C -0.161 4.161 19 C -0.085 4.085 20 H 0.134 0.866 21 C -0.073 4.073 22 C -0.094 4.094 23 C -0.196 4.196 24 C 0.452 3.548 25 F -0.166 7.166 26 F -0.164 7.164 27 F -0.162 7.162 28 C -0.105 4.105 29 C -0.136 4.136 30 C -0.104 4.104 31 C -0.180 4.180 32 H 0.078 0.922 33 H 0.128 0.872 34 H 0.102 0.898 35 H 0.144 0.856 36 H 0.153 0.847 37 H 0.164 0.836 38 H 0.144 0.856 39 H 0.235 0.765 40 H -0.212 1.212 41 H -0.232 1.232 42 H 0.157 0.843 43 H 0.172 0.828 44 H 0.258 0.742 45 H 0.123 0.877 46 H 0.109 0.891 47 H 0.161 0.839 48 H 0.157 0.843 49 H 0.172 0.828 50 H 0.169 0.831 51 H 0.089 0.911 52 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 2.086 -1.407 0.466 2.559 hybrid contribution -1.853 -0.553 0.183 1.942 sum 0.233 -1.959 0.649 2.077 Atomic orbital electron populations 1.22364 0.90673 1.05698 1.04252 1.22407 0.97028 0.82207 0.97867 1.86188 1.81445 1.27000 1.27901 1.19267 0.95841 0.93147 0.84249 1.20584 1.03903 0.94126 0.99218 1.20971 0.97718 0.99709 0.91010 1.20269 1.03709 0.96607 0.95315 1.25055 0.88756 1.10352 0.93995 1.86563 1.23260 1.75130 1.50666 0.94168 0.88509 0.73587 0.77574 1.20987 0.95308 0.93638 0.97505 1.21524 1.06541 1.02638 0.91860 1.20486 0.78893 0.82759 0.87278 1.90754 1.41387 1.66857 1.45411 1.45393 1.57437 1.07925 1.23717 1.21885 0.97640 0.93439 0.86180 0.89560 1.23400 0.95903 0.92757 1.04042 1.21647 0.98394 0.90776 0.97660 0.86586 1.19811 0.96231 0.95607 0.95627 1.21005 0.97226 0.91847 0.99302 1.20002 1.02926 0.96905 0.99725 1.18522 0.79712 0.81878 0.74680 1.93220 1.40938 1.93287 1.89148 1.93185 1.89992 1.47576 1.85641 1.93183 1.96557 1.96474 1.29998 1.21179 0.95139 0.99993 0.94179 1.21453 0.97795 0.93138 1.01209 1.21586 0.97847 0.97947 0.93005 1.23584 0.99143 0.95935 0.99384 0.92225 0.87187 0.89785 0.85561 0.84740 0.83552 0.85553 0.76540 1.21221 1.23173 0.84256 0.82785 0.74240 0.87707 0.89074 0.83915 0.84275 0.82766 0.83082 0.91128 0.88060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.18 9.13 71.98 0.66 1.84 16 2 C 0.06 -0.16 2.64 29.85 0.08 -0.08 16 3 O -0.31 -1.70 9.34 -73.38 -0.69 -2.39 16 4 C 0.12 0.35 6.60 22.51 0.15 0.49 16 5 C -0.16 -0.44 9.99 22.37 0.22 -0.21 16 6 C -0.08 0.02 8.66 22.25 0.19 0.21 16 7 C -0.16 0.10 5.39 -19.85 -0.11 -0.01 16 8 C -0.07 0.10 2.82 71.24 0.20 0.30 16 9 O -0.55 -0.81 12.77 -148.98 -1.90 -2.71 16 10 Si 0.76 -1.32 29.78 68.60 2.04 0.72 16 11 C -0.06 0.07 9.60 22.25 0.21 0.28 16 12 C -0.21 0.34 8.24 22.37 0.18 0.53 16 13 C 0.52 0.84 7.18 87.66 0.63 1.46 16 14 O -0.57 -7.25 16.11 15.97 0.26 -6.99 16 15 N -0.69 4.37 5.22 -440.05 -2.30 2.07 16 16 C 0.11 -0.62 4.32 45.52 0.20 -0.42 16 17 H 0.09 -0.02 7.47 -2.39 -0.02 -0.03 16 18 C -0.12 1.18 7.29 31.12 0.23 1.40 16 19 C -0.07 0.61 3.86 -11.01 -0.04 0.57 16 20 H 0.12 -1.38 8.09 -2.39 -0.02 -1.40 16 21 C -0.07 0.41 5.29 -19.86 -0.11 0.30 16 22 C -0.08 0.21 9.06 22.27 0.20 0.41 16 23 C -0.19 -0.03 5.45 -19.87 -0.11 -0.13 16 24 C 0.51 1.47 3.36 71.24 0.24 1.71 16 25 F -0.18 -0.93 17.30 44.97 0.78 -0.15 16 26 F -0.18 -0.80 16.46 44.97 0.74 -0.06 16 27 F -0.18 -0.63 16.46 44.97 0.74 0.11 16 28 C -0.09 0.15 9.40 22.27 0.21 0.36 16 29 C -0.12 0.58 10.05 22.27 0.22 0.81 16 30 C -0.09 0.53 8.63 22.27 0.19 0.72 16 31 C -0.14 0.96 7.25 31.12 0.23 1.19 16 32 H 0.06 -0.15 8.14 -2.38 -0.02 -0.17 16 33 H 0.11 -1.46 7.92 -2.39 -0.02 -1.48 16 34 H 0.08 -0.61 6.91 -2.39 -0.02 -0.63 16 35 H 0.13 -1.04 6.31 -2.39 -0.02 -1.06 16 36 H 0.13 0.31 8.06 -2.91 -0.02 0.28 16 37 H 0.15 -0.58 4.87 -2.91 -0.01 -0.59 16 38 H 0.13 -0.42 7.96 -2.38 -0.02 -0.44 16 39 H 0.39 -1.41 8.70 -74.05 -0.64 -2.05 16 40 H -0.29 -0.70 7.11 99.48 0.71 0.00 16 41 H -0.30 -1.84 7.11 99.48 0.71 -1.13 16 42 H 0.14 -0.47 8.06 -2.91 -0.02 -0.50 16 43 H 0.15 -1.13 5.43 -2.91 -0.02 -1.15 16 44 H 0.42 -5.64 8.48 -92.71 -0.79 -6.42 16 45 H 0.10 -1.02 7.73 -2.38 -0.02 -1.04 16 46 H 0.09 -1.01 8.14 -2.38 -0.02 -1.03 16 47 H 0.14 -0.75 7.60 -2.91 -0.02 -0.77 16 48 H 0.14 -0.46 7.60 -2.91 -0.02 -0.48 16 49 H 0.15 -1.40 8.06 -2.91 -0.02 -1.43 16 50 H 0.15 -1.51 6.64 -2.91 -0.02 -1.53 16 51 H 0.07 -0.34 8.14 -2.38 -0.02 -0.36 16 52 H 0.10 -0.76 6.30 -2.39 -0.02 -0.77 16 Total: 0.00 -25.00 438.50 3.18 -21.82 By element: Atomic # 1 Polarization: -23.80 SS G_CDS: -0.38 Total: -24.18 kcal Atomic # 6 Polarization: 7.86 SS G_CDS: 3.88 Total: 11.74 kcal Atomic # 7 Polarization: 4.37 SS G_CDS: -2.30 Total: 2.07 kcal Atomic # 8 Polarization: -9.76 SS G_CDS: -2.33 Total: -12.09 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 2.26 Total: -0.10 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: 2.04 Total: 0.72 kcal Total: -25.00 3.18 -21.82 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.394 kcal (2) G-P(sol) polarization free energy of solvation -24.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.86 seconds