Wall clock time and date at job start Mon Mar 8 2021 02:17:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37657 * 125.67670 * 2 1 4 4 C 1.46681 * 126.23284 * 0.02562 * 3 2 1 5 5 O 1.21689 * 119.99787 * 4.64834 * 4 3 2 6 6 N 1.34769 * 119.99842 * 184.64942 * 4 3 2 7 7 C 1.46505 * 120.00093 * 174.95385 * 6 4 3 8 8 H 1.08995 * 112.90391 * 23.74504 * 7 6 4 9 9 C 1.53782 * 113.61397 * 154.99960 * 7 6 4 10 10 C 1.53787 * 87.08047 * 89.11584 * 9 7 6 11 11 H 1.08998 * 113.61118 * 270.79904 * 10 9 7 12 12 C 1.50698 * 113.61255 * 139.97715 * 10 9 7 13 13 C 1.38214 * 119.99900 * 121.52928 * 12 10 9 14 14 C 1.38259 * 120.00288 * 179.97438 * 13 12 10 15 15 C 1.50697 * 120.00159 * 180.02562 * 14 13 12 16 16 F 1.39902 * 109.47006 * 180.02562 * 15 14 13 17 17 F 1.39893 * 109.47057 * 300.02018 * 15 14 13 18 18 F 1.39901 * 109.47144 * 60.02219 * 15 14 13 19 19 C 1.38211 * 119.99841 * 0.02562 * 14 13 12 20 20 C 1.38265 * 120.00052 * 359.95662 * 19 14 13 21 21 C 1.38218 * 119.99873 * 0.27752 * 20 19 14 22 22 C 1.53787 * 87.17256 * 25.38826 * 10 9 7 23 23 C 1.37872 * 107.52938 * 179.73882 * 3 2 1 24 24 C 1.39828 * 107.09075 * 0.22323 * 23 3 2 25 25 C 1.35459 * 107.86435 * 0.02562 * 24 23 3 26 26 C 1.50692 * 125.56693 * 180.02562 * 25 24 23 27 27 O 1.42901 * 109.47388 * 149.97787 * 26 25 24 28 28 Si 1.86304 * 109.47083 * 29.98271 * 26 25 24 29 29 H 1.09006 * 109.46950 * 95.80378 * 1 2 3 30 30 H 1.09003 * 109.47410 * 215.80195 * 1 2 3 31 31 H 1.08999 * 109.47595 * 335.80662 * 1 2 3 32 32 H 0.97005 * 120.00006 * 354.95045 * 6 4 3 33 33 H 1.08997 * 113.61612 * 334.57055 * 9 7 6 34 34 H 1.09001 * 113.61048 * 203.65997 * 9 7 6 35 35 H 1.08006 * 119.99923 * 359.97438 * 13 12 10 36 36 H 1.07993 * 120.00261 * 179.97438 * 19 14 13 37 37 H 1.07996 * 120.00098 * 180.02562 * 20 19 14 38 38 H 1.07996 * 119.99792 * 179.71945 * 21 20 19 39 39 H 1.08998 * 113.61110 * 89.16114 * 22 10 9 40 40 H 1.09000 * 113.61165 * 220.06201 * 22 10 9 41 41 H 1.08000 * 126.45269 * 180.19176 * 23 3 2 42 42 H 1.08001 * 126.07333 * 180.02562 * 24 23 3 43 43 H 1.08997 * 109.47627 * 269.98065 * 26 25 24 44 44 H 0.96707 * 113.99679 * 300.00721 * 27 26 25 45 45 H 1.48500 * 109.99702 * 58.67562 * 28 26 25 46 46 H 1.48498 * 110.00342 * 179.97438 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5125 0.0005 5 8 0.6250 2.7647 0.0864 6 7 2.7089 3.5143 -0.0941 7 6 2.2490 4.9009 -0.2050 8 1 1.2481 5.0495 0.2001 9 6 3.2751 5.9319 0.2939 10 6 3.8376 5.9479 -1.1373 11 1 4.6150 5.2035 -1.3091 12 6 4.2268 7.3223 -1.6176 13 6 5.5258 7.5723 -2.0179 14 6 5.8828 8.8330 -2.4591 15 6 7.2991 9.1054 -2.8961 16 9 7.4150 10.4410 -3.2959 17 9 8.1713 8.8604 -1.8302 18 9 7.6257 8.2677 -3.9679 19 6 4.9408 9.8435 -2.4993 20 6 3.6411 9.5934 -2.0992 21 6 3.2855 8.3343 -1.6536 22 6 2.4432 5.5025 -1.6088 23 6 3.5779 0.6888 0.0060 24 6 3.5522 -0.7092 0.0044 25 6 2.2555 -1.1009 -0.0030 26 6 1.7709 -2.5278 -0.0065 27 8 0.5094 -2.6042 0.6606 28 14 3.0069 -3.6056 0.8775 29 1 -0.3633 -0.1039 -1.0225 30 1 -0.3634 -0.8335 0.6012 31 1 -0.3634 0.9374 0.4211 32 1 3.6587 3.3173 -0.0888 33 1 3.9710 5.5334 1.0321 34 1 2.8296 6.8790 0.5985 35 1 6.2621 6.7827 -1.9861 36 1 5.2196 10.8284 -2.8435 37 1 2.9049 10.3829 -2.1309 38 1 2.2714 8.1401 -1.3367 39 1 1.7700 6.3320 -1.8253 40 1 2.4686 4.7578 -2.4044 41 1 4.4583 1.3144 0.0105 42 1 4.4132 -1.3611 0.0084 43 1 1.6593 -2.8712 -1.0349 44 1 0.5339 -2.3133 1.5826 45 1 3.1918 -3.1282 2.2714 46 1 2.5404 -5.0154 0.8815 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:17:11 Heat of formation + Delta-G solvation = -104.712026 kcal Electronic energy + Delta-G solvation = -34024.730257 eV Core-core repulsion = 28853.993294 eV Total energy + Delta-G solvation = -5170.736963 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.134 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.22204 -48.75150 -48.69107 -42.61994 -41.50336 -40.23114 -38.83080 -37.93515 -34.97935 -33.70436 -32.85394 -32.24021 -31.13172 -27.59568 -27.23991 -27.10133 -26.65841 -25.84032 -23.49693 -23.39460 -22.49240 -21.56137 -20.65770 -20.26734 -19.54731 -19.42123 -19.00242 -18.84801 -18.18956 -17.34237 -17.20527 -16.96354 -16.51950 -16.27606 -16.10104 -15.90694 -15.61936 -15.58356 -15.37511 -15.33049 -15.13702 -14.98019 -14.91155 -14.85730 -14.73207 -14.50298 -14.45232 -14.27210 -14.21427 -13.81496 -13.75985 -13.45140 -13.27994 -13.16407 -12.95597 -12.89508 -12.38751 -12.36932 -11.95074 -11.86965 -11.77404 -11.29787 -11.22579 -10.81937 -10.22745 -10.14808 -9.79235 -9.74068 -9.09911 -4.87158 -0.08044 0.23576 0.34941 1.18200 1.52238 1.62165 1.73237 1.77415 2.01765 2.30128 2.33841 2.43723 2.68697 2.96653 3.14297 3.36336 3.43594 3.56534 3.64514 3.65363 3.75872 3.85372 3.94856 3.98057 4.08416 4.10739 4.25052 4.28564 4.35616 4.39913 4.48875 4.55484 4.62382 4.65089 4.71164 4.77190 4.85003 4.90750 4.96389 5.02906 5.09590 5.13835 5.18003 5.19440 5.32517 5.43216 5.60068 5.73780 5.78814 5.99479 6.13012 6.29178 6.46913 7.11288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.407 5.407 3 C -0.086 4.086 4 C 0.589 3.411 5 O -0.587 6.587 6 N -0.687 5.687 7 C 0.116 3.884 8 H 0.089 0.911 9 C -0.123 4.123 10 C -0.066 4.066 11 H 0.113 0.887 12 C -0.073 4.073 13 C -0.075 4.075 14 C -0.194 4.194 15 C 0.506 3.494 16 F -0.182 7.182 17 F -0.182 7.182 18 F -0.183 7.183 19 C -0.088 4.088 20 C -0.118 4.118 21 C -0.086 4.086 22 C -0.141 4.141 23 C -0.125 4.125 24 C -0.201 4.201 25 C 0.006 3.994 26 C -0.067 4.067 27 O -0.547 6.547 28 Si 0.817 3.183 29 H 0.068 0.932 30 H 0.110 0.890 31 H 0.087 0.913 32 H 0.417 0.583 33 H 0.089 0.911 34 H 0.107 0.893 35 H 0.141 0.859 36 H 0.142 0.858 37 H 0.155 0.845 38 H 0.152 0.848 39 H 0.103 0.897 40 H 0.067 0.933 41 H 0.176 0.824 42 H 0.184 0.816 43 H 0.131 0.869 44 H 0.386 0.614 45 H -0.291 1.291 46 H -0.298 1.298 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.375 -0.845 0.816 2.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.081 5.081 3 C -0.199 4.199 4 C 0.379 3.621 5 O -0.469 6.469 6 N -0.338 5.338 7 C 0.010 3.990 8 H 0.107 0.893 9 C -0.161 4.161 10 C -0.084 4.084 11 H 0.131 0.869 12 C -0.073 4.073 13 C -0.093 4.093 14 C -0.196 4.196 15 C 0.452 3.548 16 F -0.163 7.163 17 F -0.164 7.164 18 F -0.164 7.164 19 C -0.106 4.106 20 C -0.136 4.136 21 C -0.104 4.104 22 C -0.179 4.179 23 C -0.151 4.151 24 C -0.225 4.225 25 C -0.112 4.112 26 C -0.175 4.175 27 O -0.355 6.355 28 Si 0.719 3.281 29 H 0.086 0.914 30 H 0.128 0.872 31 H 0.106 0.894 32 H 0.255 0.745 33 H 0.107 0.893 34 H 0.125 0.875 35 H 0.159 0.841 36 H 0.160 0.840 37 H 0.173 0.827 38 H 0.169 0.831 39 H 0.121 0.879 40 H 0.086 0.914 41 H 0.194 0.806 42 H 0.201 0.799 43 H 0.149 0.851 44 H 0.236 0.764 45 H -0.217 1.217 46 H -0.226 1.226 Dipole moment (debyes) X Y Z Total from point charges 1.122 -1.352 0.930 1.988 hybrid contribution -0.435 0.637 0.334 0.840 sum 0.687 -0.715 1.263 1.606 Atomic orbital electron populations 1.22517 0.76119 1.05797 1.04063 1.43913 1.07033 1.04679 1.52431 1.20220 0.91591 0.87211 1.20836 1.17210 0.85293 0.84366 0.75254 1.90759 1.18039 1.85315 1.52815 1.45169 1.10029 1.04990 1.73644 1.21924 0.99446 0.79998 0.97602 0.89301 1.23404 0.97478 0.99261 0.95984 1.21625 0.97575 0.92898 0.96335 0.86853 1.19796 0.92411 0.96274 0.98779 1.20961 0.97403 0.94970 0.95953 1.20002 0.91553 0.98142 1.09866 1.18504 0.87701 0.73761 0.74800 1.93160 1.96674 1.35450 1.91048 1.93210 1.72568 1.94026 1.56547 1.93212 1.93983 1.71777 1.57458 1.21243 0.93339 0.98816 0.97219 1.21467 0.95709 0.98193 0.98224 1.21572 1.00550 0.92204 0.96026 1.23612 0.96523 1.01082 0.96708 1.21729 0.94280 0.95861 1.03226 1.21018 0.95371 0.95616 1.10478 1.21463 0.91612 0.89261 1.08865 1.25266 0.93174 0.94270 1.04773 1.86565 1.30562 1.88388 1.30017 0.93297 0.82899 0.73245 0.78609 0.91363 0.87152 0.89438 0.74479 0.89276 0.87493 0.84115 0.84013 0.82692 0.83074 0.87879 0.91418 0.80631 0.79854 0.85141 0.76413 1.21715 1.22557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.24 10.30 127.77 1.32 1.55 16 2 N -0.41 -1.76 3.16 -519.70 -1.64 -3.40 16 3 C -0.09 -0.31 6.89 40.35 0.28 -0.03 16 4 C 0.59 3.08 7.77 86.45 0.67 3.76 16 5 O -0.59 -7.42 14.12 -4.31 -0.06 -7.48 16 6 N -0.69 1.68 5.24 -443.72 -2.33 -0.64 16 7 C 0.12 -0.39 4.36 45.58 0.20 -0.19 16 8 H 0.09 0.10 7.42 -2.39 -0.02 0.08 16 9 C -0.12 0.96 7.29 31.12 0.23 1.19 16 10 C -0.07 0.49 3.85 -11.01 -0.04 0.44 16 11 H 0.11 -1.07 8.09 -2.39 -0.02 -1.09 16 12 C -0.07 0.32 5.29 -19.87 -0.11 0.21 16 13 C -0.07 0.13 9.26 22.27 0.21 0.34 16 14 C -0.19 -0.17 5.37 -19.87 -0.11 -0.27 16 15 C 0.51 1.76 3.32 71.23 0.24 2.00 16 16 F -0.18 -0.83 15.97 44.97 0.72 -0.12 16 17 F -0.18 -0.88 17.24 44.97 0.78 -0.10 16 18 F -0.18 -0.93 17.24 44.97 0.78 -0.15 16 19 C -0.09 0.11 9.43 22.27 0.21 0.32 16 20 C -0.12 0.52 10.05 22.27 0.22 0.74 16 21 C -0.09 0.46 8.53 22.27 0.19 0.65 16 22 C -0.14 0.71 7.27 31.18 0.23 0.94 16 23 C -0.12 0.28 10.35 22.57 0.23 0.51 16 24 C -0.20 0.60 9.37 22.01 0.21 0.81 16 25 C 0.01 0.00 6.15 41.34 0.25 0.26 16 26 C -0.07 0.16 2.99 71.23 0.21 0.37 16 27 O -0.55 -0.10 10.11 -148.98 -1.51 -1.61 16 28 Si 0.82 -3.85 31.10 68.60 2.13 -1.71 16 29 H 0.07 0.31 8.14 -2.38 -0.02 0.29 16 30 H 0.11 0.12 5.24 -2.39 -0.01 0.11 16 31 H 0.09 0.68 5.92 -2.39 -0.01 0.67 16 32 H 0.42 -3.43 7.60 -92.70 -0.70 -4.14 16 33 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 34 H 0.11 -0.92 7.62 -2.39 -0.02 -0.94 16 35 H 0.14 -0.58 8.05 -2.91 -0.02 -0.61 16 36 H 0.14 -0.39 7.16 -2.91 -0.02 -0.41 16 37 H 0.16 -1.35 8.06 -2.91 -0.02 -1.38 16 38 H 0.15 -1.41 6.73 -2.91 -0.02 -1.43 16 39 H 0.10 -0.66 6.41 -2.39 -0.02 -0.67 16 40 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 41 H 0.18 -1.64 7.45 -2.91 -0.02 -1.66 16 42 H 0.18 -1.83 6.85 -2.91 -0.02 -1.85 16 43 H 0.13 -0.51 7.96 -2.39 -0.02 -0.53 16 44 H 0.39 -1.66 8.29 -74.05 -0.61 -2.28 16 45 H -0.29 -0.26 7.11 99.48 0.71 0.45 16 46 H -0.30 -0.75 7.11 99.48 0.71 -0.04 16 Total: 0.00 -21.35 389.52 3.29 -18.06 By element: Atomic # 1 Polarization: -16.21 SS G_CDS: -0.21 Total: -16.42 kcal Atomic # 6 Polarization: 8.94 SS G_CDS: 4.64 Total: 13.58 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -3.97 Total: -4.04 kcal Atomic # 8 Polarization: -7.53 SS G_CDS: -1.57 Total: -9.09 kcal Atomic # 9 Polarization: -2.64 SS G_CDS: 2.27 Total: -0.37 kcal Atomic # 14 Polarization: -3.85 SS G_CDS: 2.13 Total: -1.71 kcal Total: -21.35 3.29 -18.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.656 kcal (2) G-P(sol) polarization free energy of solvation -21.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.712 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds