Wall clock time and date at job start Mon Mar 8 2021 02:18:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47308 * 2 1 4 4 C 1.50705 * 109.46978 * 120.00075 * 2 1 3 5 5 C 1.37938 * 119.92097 * 64.99687 * 4 2 1 6 6 C 1.39599 * 119.86986 * 179.97438 * 5 4 2 7 7 C 1.47847 * 120.14048 * 179.97438 * 6 5 4 8 8 O 1.21561 * 119.99907 * 0.02562 * 7 6 5 9 9 N 1.34769 * 120.00273 * 180.02562 * 7 6 5 10 10 C 1.46504 * 119.99949 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.84953 * 336.19034 * 10 9 7 12 12 C 1.53778 * 113.61774 * 107.50438 * 10 9 7 13 13 C 1.53775 * 87.08448 * 89.11303 * 12 10 9 14 14 H 1.09005 * 113.68957 * 270.87431 * 13 12 10 15 15 C 1.50701 * 113.61451 * 139.98328 * 13 12 10 16 16 C 1.38207 * 119.99822 * 322.47981 * 15 13 12 17 17 C 1.38262 * 119.99549 * 180.02562 * 16 15 13 18 18 C 1.38204 * 120.00535 * 359.95204 * 17 16 15 19 19 C 1.38254 * 119.99816 * 0.13864 * 18 17 16 20 20 C 1.50706 * 120.00295 * 179.97438 * 19 18 17 21 21 F 1.39899 * 109.46743 * 269.90878 * 20 19 18 22 22 F 1.39900 * 109.47002 * 29.90594 * 20 19 18 23 23 F 1.39894 * 109.47498 * 149.90782 * 20 19 18 24 24 C 1.38220 * 120.00044 * 359.83750 * 19 18 17 25 25 C 1.53776 * 87.08233 * 25.43253 * 13 12 10 26 26 C 1.39543 * 119.72379 * 0.25086 * 6 5 4 27 27 C 1.38078 * 119.83996 * 359.49803 * 26 6 5 28 28 Br 1.89099 * 119.93929 * 180.24908 * 27 26 6 29 29 C 1.38364 * 119.91903 * 244.97628 * 4 2 1 30 30 H 0.96700 * 113.99783 * 60.00129 * 1 2 3 31 31 H 1.09004 * 109.47217 * 239.99514 * 2 1 3 32 32 H 1.48500 * 109.99697 * 298.67744 * 3 2 1 33 33 H 1.48492 * 109.99835 * 59.99585 * 3 2 1 34 34 H 1.07998 * 120.07029 * 359.96138 * 5 4 2 35 35 H 0.96994 * 120.00262 * 359.97438 * 9 7 6 36 36 H 1.09001 * 113.61205 * 334.56500 * 12 10 9 37 37 H 1.09004 * 113.61534 * 203.66294 * 12 10 9 38 38 H 1.07991 * 120.00400 * 359.97438 * 16 15 13 39 39 H 1.08013 * 119.99532 * 179.97438 * 17 16 15 40 40 H 1.07997 * 120.00478 * 180.02562 * 18 17 16 41 41 H 1.08000 * 119.99660 * 180.36499 * 24 19 18 42 42 H 1.09002 * 113.61534 * 89.11452 * 25 13 12 43 43 H 1.09002 * 113.61627 * 219.93322 * 25 13 12 44 44 H 1.07994 * 120.08415 * 179.74631 * 26 6 5 45 45 H 1.08002 * 119.85725 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6842 -2.0573 1.3964 6 6 2.1505 -2.7145 2.5364 7 6 1.8886 -4.1579 2.7205 8 8 1.2664 -4.7750 1.8781 9 7 2.3395 -4.7894 3.8224 10 6 2.0804 -6.2198 4.0045 11 1 1.2102 -6.5666 3.4473 12 6 3.3267 -7.1006 3.8153 13 6 3.5970 -6.9041 5.3163 14 1 4.2046 -6.0273 5.5407 15 6 4.0877 -8.1490 6.0094 16 6 3.5773 -9.3837 5.6555 17 6 4.0271 -10.5258 6.2918 18 6 4.9878 -10.4329 7.2810 19 6 5.4969 -9.1977 7.6364 20 6 6.5440 -9.0963 8.7155 21 9 5.9199 -8.9332 9.9569 22 9 7.3132 -10.2648 8.7302 23 9 7.3709 -7.9969 8.4612 24 6 5.0477 -8.0559 7.0000 25 6 2.0866 -6.6643 5.4767 26 6 2.8598 -2.0021 3.5042 27 6 3.1050 -0.6553 3.3237 28 35 4.0721 0.3112 4.6301 29 6 2.6396 -0.0102 2.1909 30 1 -0.3933 0.4417 -0.7651 31 1 1.7924 -0.5139 -0.8900 32 1 1.5880 2.4584 -1.2243 33 1 1.5615 2.4678 1.2084 34 1 1.1310 -2.6025 0.6460 35 1 2.8363 -4.2971 4.4945 36 1 4.0846 -6.6525 3.1728 37 1 3.0961 -8.1310 3.5444 38 1 2.8266 -9.4563 4.8825 39 1 3.6280 -11.4906 6.0155 40 1 5.3394 -11.3251 7.7778 41 1 5.4497 -7.0916 7.2735 42 1 1.5169 -7.5753 5.6601 43 1 1.8433 -5.8649 6.1767 44 1 3.2196 -2.5038 4.3902 45 1 2.8302 1.0443 2.0561 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:18:17 Heat of formation + Delta-G solvation = -122.029616 kcal Electronic energy + Delta-G solvation = -35047.995154 eV Core-core repulsion = 29629.426631 eV Total energy + Delta-G solvation = -5418.568523 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 456.033 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -51.22737 -48.75133 -48.70263 -41.89219 -41.07161 -40.02228 -38.85771 -37.80291 -34.98317 -33.67968 -33.25217 -32.73742 -31.87276 -30.47824 -27.17198 -27.08541 -26.66888 -26.62456 -25.06075 -23.42849 -22.71224 -22.55957 -21.63037 -20.44628 -19.56079 -19.42399 -19.02916 -18.87774 -18.64157 -17.71093 -17.40378 -17.30772 -16.76065 -16.37076 -16.23595 -16.18407 -15.90840 -15.58021 -15.54724 -15.39038 -15.18796 -15.16208 -14.98278 -14.86447 -14.84495 -14.75388 -14.53056 -14.25940 -14.22143 -14.03970 -13.74589 -13.67542 -13.42629 -13.24370 -12.92310 -12.84101 -12.42597 -12.37841 -12.01233 -11.88745 -11.86119 -11.77116 -11.49612 -11.26424 -11.18069 -10.60878 -10.36801 -10.20540 -10.09202 -9.90559 -9.78972 -4.98502 -0.52314 -0.16005 -0.08053 0.23720 0.42103 1.19671 1.49909 1.55323 1.61759 1.87697 1.93972 2.42593 2.44702 2.68308 2.96217 3.14995 3.35382 3.36146 3.43791 3.58361 3.64043 3.69596 3.78532 3.84922 3.87203 3.94489 3.98168 4.08106 4.10458 4.14798 4.24890 4.28495 4.39737 4.49402 4.63457 4.65357 4.75646 4.78063 4.83858 4.90477 4.92616 4.95203 5.03792 5.08184 5.13051 5.18010 5.32247 5.35607 5.42727 5.59932 5.78908 6.35099 6.52651 7.02773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.087 4.087 3 Si 0.756 3.244 4 C -0.078 4.078 5 C -0.029 4.029 6 C -0.136 4.136 7 C 0.565 3.435 8 O -0.569 6.569 9 N -0.694 5.694 10 C 0.113 3.887 11 H 0.092 0.908 12 C -0.140 4.140 13 C -0.068 4.068 14 H 0.113 0.887 15 C -0.073 4.073 16 C -0.085 4.085 17 C -0.118 4.118 18 C -0.086 4.086 19 C -0.194 4.194 20 C 0.506 3.494 21 F -0.184 7.184 22 F -0.183 7.183 23 F -0.181 7.181 24 C -0.076 4.076 25 C -0.125 4.125 26 C -0.044 4.044 27 C -0.099 4.099 28 Br -0.028 7.028 29 C -0.064 4.064 30 H 0.398 0.602 31 H 0.103 0.897 32 H -0.279 1.279 33 H -0.290 1.290 34 H 0.134 0.866 35 H 0.414 0.586 36 H 0.070 0.930 37 H 0.105 0.895 38 H 0.153 0.847 39 H 0.156 0.844 40 H 0.140 0.860 41 H 0.142 0.858 42 H 0.107 0.893 43 H 0.088 0.912 44 H 0.164 0.836 45 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.154 0.696 -1.688 2.160 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.195 4.195 3 Si 0.660 3.340 4 C -0.079 4.079 5 C -0.048 4.048 6 C -0.140 4.140 7 C 0.353 3.647 8 O -0.449 6.449 9 N -0.345 5.345 10 C 0.008 3.992 11 H 0.110 0.890 12 C -0.178 4.178 13 C -0.087 4.087 14 H 0.131 0.869 15 C -0.073 4.073 16 C -0.103 4.103 17 C -0.135 4.135 18 C -0.105 4.105 19 C -0.196 4.196 20 C 0.452 3.548 21 F -0.165 7.165 22 F -0.164 7.164 23 F -0.163 7.163 24 C -0.094 4.094 25 C -0.163 4.163 26 C -0.064 4.064 27 C -0.179 4.179 28 Br 0.058 6.942 29 C -0.084 4.084 30 H 0.249 0.751 31 H 0.121 0.879 32 H -0.206 1.206 33 H -0.218 1.218 34 H 0.152 0.848 35 H 0.253 0.747 36 H 0.089 0.911 37 H 0.123 0.877 38 H 0.170 0.830 39 H 0.173 0.827 40 H 0.158 0.842 41 H 0.159 0.841 42 H 0.126 0.874 43 H 0.106 0.894 44 H 0.182 0.818 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.000 1.129 -1.189 1.920 hybrid contribution -0.844 -0.154 -0.180 0.877 sum 0.155 0.975 -1.369 1.688 Atomic orbital electron populations 1.86544 1.18104 1.80806 1.51269 1.25014 0.84472 1.11998 0.98014 0.94248 0.90291 0.72074 0.77344 1.19340 0.98945 0.93411 0.96248 1.21277 0.93857 0.93699 0.96012 1.19868 1.03671 0.93307 0.97192 1.18248 0.78222 0.86561 0.81678 1.90799 1.42005 1.68090 1.44032 1.45482 1.56684 1.10123 1.22259 1.21932 0.99076 0.79740 0.98495 0.89027 1.23577 0.97534 1.01251 0.95468 1.21644 0.96827 0.95356 0.94839 0.86930 1.19794 0.95893 0.95692 0.95886 1.21581 0.98569 0.91493 0.98648 1.21461 0.96326 1.00415 0.95344 1.21177 0.95978 0.96141 0.97157 1.20003 1.01599 0.97520 1.00448 1.18523 0.81195 0.73349 0.81737 1.93219 1.82388 1.95266 1.45645 1.93184 1.77385 1.49136 1.96689 1.93182 1.74284 1.54765 1.94043 1.21006 0.95913 0.97630 0.94893 1.23418 0.94985 1.03254 0.94638 1.21465 0.94422 0.92099 0.98428 1.21704 1.04237 0.95380 0.96580 1.96852 1.72104 1.73671 1.51586 1.21363 0.95014 1.00553 0.91438 0.75055 0.87949 1.20576 1.21752 0.84827 0.74740 0.91114 0.87712 0.82959 0.82661 0.84231 0.84055 0.87445 0.89388 0.81823 0.83082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.72 12.81 -148.98 -1.91 -2.63 16 2 C -0.09 0.16 2.79 71.24 0.20 0.36 16 3 Si 0.76 -2.68 29.84 68.60 2.05 -0.64 16 4 C -0.08 -0.06 5.38 -19.90 -0.11 -0.17 16 5 C -0.03 -0.09 9.23 22.53 0.21 0.11 16 6 C -0.14 -0.18 5.87 -20.09 -0.12 -0.29 16 7 C 0.57 1.91 7.77 86.79 0.67 2.59 16 8 O -0.57 -6.67 15.95 -3.91 -0.06 -6.74 16 9 N -0.69 2.56 5.21 -442.90 -2.31 0.25 16 10 C 0.11 -0.48 4.32 45.52 0.20 -0.28 16 11 H 0.09 0.00 7.46 -2.39 -0.02 -0.02 16 12 C -0.14 0.84 7.25 31.12 0.23 1.07 16 13 C -0.07 0.54 3.86 -11.02 -0.04 0.49 16 14 H 0.11 -1.11 8.09 -2.38 -0.02 -1.13 16 15 C -0.07 0.34 5.29 -19.87 -0.11 0.24 16 16 C -0.09 0.49 8.61 22.27 0.19 0.68 16 17 C -0.12 0.55 10.05 22.27 0.22 0.77 16 18 C -0.09 0.12 9.40 22.27 0.21 0.33 16 19 C -0.19 -0.15 5.45 -19.86 -0.11 -0.26 16 20 C 0.51 1.79 3.37 71.24 0.24 2.03 16 21 F -0.18 -0.99 17.30 44.97 0.78 -0.22 16 22 F -0.18 -0.90 16.46 44.97 0.74 -0.16 16 23 F -0.18 -0.80 16.46 44.97 0.74 -0.06 16 24 C -0.08 0.14 9.06 22.27 0.20 0.34 16 25 C -0.13 1.03 7.29 31.12 0.23 1.25 16 26 C -0.04 0.13 9.28 22.55 0.21 0.34 16 27 C -0.10 0.14 6.22 22.28 0.14 0.28 16 28 Br -0.03 0.05 33.69 -20.37 -0.69 -0.63 16 29 C -0.06 0.05 8.40 22.34 0.19 0.24 16 30 H 0.40 -2.70 8.74 -74.06 -0.65 -3.35 16 31 H 0.10 -0.60 7.96 -2.38 -0.02 -0.62 16 32 H -0.28 -0.13 7.11 99.48 0.71 0.57 16 33 H -0.29 -0.89 7.04 99.48 0.70 -0.19 16 34 H 0.13 0.73 7.65 -2.91 -0.02 0.71 16 35 H 0.41 -3.89 6.74 -92.71 -0.62 -4.51 16 36 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.10 -0.77 6.31 -2.39 -0.02 -0.79 16 38 H 0.15 -1.50 6.66 -2.92 -0.02 -1.52 16 39 H 0.16 -1.40 8.06 -2.90 -0.02 -1.42 16 40 H 0.14 -0.42 7.60 -2.91 -0.02 -0.44 16 41 H 0.14 -0.56 7.60 -2.91 -0.02 -0.59 16 42 H 0.11 -0.96 7.72 -2.39 -0.02 -0.98 16 43 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 44 H 0.16 -1.49 6.40 -2.91 -0.02 -1.51 16 45 H 0.15 -0.50 4.85 -2.91 -0.01 -0.51 16 Total: 0.00 -20.17 408.90 2.06 -18.12 By element: Atomic # 1 Polarization: -17.28 SS G_CDS: -0.13 Total: -17.41 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 2.85 Total: 10.11 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.31 Total: 0.25 kcal Atomic # 8 Polarization: -7.40 SS G_CDS: -1.97 Total: -9.37 kcal Atomic # 9 Polarization: -2.69 SS G_CDS: 2.26 Total: -0.43 kcal Atomic # 14 Polarization: -2.68 SS G_CDS: 2.05 Total: -0.64 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -0.69 Total: -0.63 kcal Total: -20.17 2.06 -18.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.912 kcal (2) G-P(sol) polarization free energy of solvation -20.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds