Wall clock time and date at job start Mon Mar 8 2021 02:19:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.34653 * 124.85648 * 2 1 4 4 C 1.36772 * 108.40265 * 180.02562 * 3 2 1 5 5 C 1.47261 * 126.94800 * 180.02562 * 4 3 2 6 6 O 1.21618 * 120.00233 * 180.02562 * 5 4 3 7 7 N 1.34783 * 119.99678 * 0.02562 * 5 4 3 8 8 C 1.46496 * 119.99985 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.85178 * 336.20224 * 8 7 5 10 10 C 1.53958 * 113.53493 * 107.50684 * 8 7 5 11 11 C 1.53786 * 87.01721 * 89.19223 * 10 8 7 12 12 H 1.09004 * 113.61186 * 270.77062 * 11 10 8 13 13 C 1.50698 * 113.61319 * 139.95182 * 11 10 8 14 14 C 1.38220 * 119.99719 * 140.86066 * 13 11 10 15 15 C 1.38254 * 119.99456 * 179.97438 * 14 13 11 16 16 C 1.50703 * 119.99558 * 180.02562 * 15 14 13 17 17 F 1.39905 * 109.47157 * 89.99917 * 16 15 14 18 18 F 1.39900 * 109.47159 * 330.00218 * 16 15 14 19 19 F 1.39897 * 109.47274 * 209.99909 * 16 15 14 20 20 C 1.38208 * 120.00404 * 0.27772 * 15 14 13 21 21 C 1.38262 * 120.00116 * 359.50822 * 20 15 14 22 22 C 1.38210 * 119.99486 * 0.44942 * 21 20 15 23 23 C 1.53777 * 87.17377 * 25.36084 * 11 10 8 24 24 C 1.46692 * 106.10862 * 0.26298 * 4 3 2 25 25 C 1.34482 * 106.33469 * 359.57218 * 24 4 3 26 26 C 1.50701 * 125.57147 * 180.15061 * 25 24 4 27 27 O 1.42901 * 109.46837 * 210.33495 * 26 25 24 28 28 Si 1.86300 * 109.46800 * 330.32881 * 26 25 24 29 29 H 1.09002 * 109.47781 * 89.96536 * 1 2 3 30 30 H 1.08995 * 109.47883 * 209.97279 * 1 2 3 31 31 H 1.09003 * 109.46727 * 329.97429 * 1 2 3 32 32 H 1.08003 * 125.80299 * 0.05205 * 3 2 1 33 33 H 0.96996 * 119.99775 * 0.02562 * 7 5 4 34 34 H 1.08995 * 113.66787 * 334.66052 * 10 8 7 35 35 H 1.09001 * 113.61338 * 203.70964 * 10 8 7 36 36 H 1.07994 * 119.99904 * 359.97438 * 14 13 11 37 37 H 1.08005 * 120.00362 * 179.73134 * 20 15 14 38 38 H 1.08000 * 120.00218 * 180.27081 * 21 20 15 39 39 H 1.08001 * 119.99943 * 179.82849 * 22 21 20 40 40 H 1.09002 * 113.61535 * 89.16016 * 23 11 10 41 41 H 1.09003 * 113.61626 * 219.97888 * 23 11 10 42 42 H 1.08009 * 126.82897 * 179.73716 * 24 4 3 43 43 H 1.08997 * 109.47825 * 90.33057 * 26 25 24 44 44 H 0.96699 * 114.00558 * 59.99653 * 27 26 25 45 45 H 1.48501 * 110.00313 * 58.68420 * 28 26 25 46 46 H 1.48499 * 109.99892 * 180.02562 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2345 1.1049 0.0000 4 6 3.5462 0.7175 -0.0006 5 6 4.7285 1.5955 -0.0003 6 8 5.8446 1.1125 -0.0013 7 7 4.5735 2.9344 0.0012 8 6 5.7496 3.8079 0.0010 9 1 6.6378 3.3220 0.4049 10 6 5.9887 4.5166 -1.3447 11 6 5.0860 5.6453 -0.8191 12 1 4.0292 5.4991 -1.0425 13 6 5.5744 7.0252 -1.1772 14 6 4.6701 8.0063 -1.5380 15 6 5.1182 9.2724 -1.8661 16 6 4.1322 10.3423 -2.2589 17 9 3.7201 11.0385 -1.1175 18 9 3.0217 9.7511 -2.8708 19 9 4.7395 11.2305 -3.1530 20 6 6.4707 9.5555 -1.8389 21 6 7.3750 8.5753 -1.4737 22 6 6.9270 7.3099 -1.1449 23 6 5.4834 5.1998 0.5981 24 6 3.5374 -0.7493 -0.0074 25 6 2.2446 -1.1198 -0.0007 26 6 1.7396 -2.5397 -0.0009 27 8 0.4804 -2.5972 -0.6742 28 14 2.9643 -3.6342 -0.8799 29 1 -0.3635 0.0006 -1.0276 30 1 -0.3635 -0.8901 0.5134 31 1 -0.3633 0.8898 0.5143 32 1 1.8768 2.1240 0.0008 33 1 3.6833 3.3196 0.0024 34 1 5.5705 3.9852 -2.1995 35 1 7.0236 4.8216 -1.4997 36 1 3.6137 7.7838 -1.5636 37 1 6.8211 10.5433 -2.0994 38 1 8.4315 8.7978 -1.4482 39 1 7.6335 6.5434 -0.8623 40 1 6.3799 5.6919 0.9753 41 1 4.6581 5.2204 1.3098 42 1 4.3980 -1.4019 -0.0136 43 1 1.6181 -2.8823 1.0267 44 1 0.5134 -2.3060 -1.5957 45 1 4.2866 -3.5586 -0.2083 46 1 2.4776 -5.0372 -0.8875 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:19:45 Heat of formation + Delta-G solvation = -107.701131 kcal Electronic energy + Delta-G solvation = -33798.054429 eV Core-core repulsion = 28627.187849 eV Total energy + Delta-G solvation = -5170.866580 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.134 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -51.21918 -48.74330 -48.69362 -42.47007 -41.48189 -40.19095 -38.74866 -37.71869 -34.67603 -33.71021 -32.83353 -32.18840 -31.16185 -27.69831 -27.11996 -26.62297 -26.55531 -25.85521 -23.85749 -23.41543 -22.44856 -21.10126 -20.62988 -20.30716 -19.55248 -19.41375 -19.02335 -18.91740 -17.37029 -17.32938 -17.14419 -16.80102 -16.71216 -16.32244 -16.06977 -15.74988 -15.55928 -15.52779 -15.44447 -15.29835 -15.15457 -15.02541 -14.96866 -14.85607 -14.74097 -14.67628 -14.40460 -14.21942 -14.05668 -13.72021 -13.46072 -13.36820 -13.23302 -13.22769 -13.04663 -12.87692 -12.38411 -12.19835 -12.09303 -11.85205 -11.72121 -11.22548 -11.03055 -10.74465 -10.20418 -10.07993 -9.78007 -9.57519 -9.21164 -4.99823 -0.07326 0.24516 0.74136 1.03212 1.39901 1.62362 1.62864 1.88856 2.04931 2.26051 2.44137 2.54129 2.68952 2.97040 3.34928 3.36432 3.48072 3.55932 3.67541 3.74866 3.85959 3.87501 3.96499 4.00010 4.09094 4.12899 4.26111 4.32209 4.38227 4.41013 4.44935 4.54793 4.66828 4.69372 4.79874 4.81012 4.89020 4.91606 4.92699 4.98370 5.00967 5.07018 5.17122 5.21798 5.33415 5.48195 5.61584 5.69810 5.79527 5.96574 6.24651 6.62511 6.65660 7.35370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.422 5.422 3 C 0.077 3.923 4 C -0.261 4.261 5 C 0.590 3.410 6 O -0.596 6.596 7 N -0.698 5.698 8 C 0.114 3.886 9 H 0.082 0.918 10 C -0.141 4.141 11 C -0.064 4.064 12 H 0.115 0.885 13 C -0.073 4.073 14 C -0.075 4.075 15 C -0.195 4.195 16 C 0.507 3.493 17 F -0.184 7.184 18 F -0.181 7.181 19 F -0.183 7.183 20 C -0.086 4.086 21 C -0.118 4.118 22 C -0.086 4.086 23 C -0.124 4.124 24 C -0.168 4.168 25 C -0.014 4.014 26 C -0.034 4.034 27 O -0.546 6.546 28 Si 0.784 3.216 29 H 0.097 0.903 30 H 0.091 0.909 31 H 0.101 0.899 32 H 0.211 0.789 33 H 0.414 0.586 34 H 0.068 0.932 35 H 0.100 0.900 36 H 0.143 0.857 37 H 0.140 0.860 38 H 0.155 0.845 39 H 0.150 0.850 40 H 0.103 0.897 41 H 0.088 0.912 42 H 0.130 0.870 43 H 0.115 0.885 44 H 0.396 0.604 45 H -0.299 1.299 46 H -0.286 1.286 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.731 1.350 -1.153 5.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.060 4.060 4 C -0.271 4.271 5 C 0.381 3.619 6 O -0.478 6.478 7 N -0.349 5.349 8 C 0.009 3.991 9 H 0.100 0.900 10 C -0.180 4.180 11 C -0.082 4.082 12 H 0.133 0.867 13 C -0.073 4.073 14 C -0.093 4.093 15 C -0.196 4.196 16 C 0.453 3.547 17 F -0.165 7.165 18 F -0.162 7.162 19 F -0.164 7.164 20 C -0.105 4.105 21 C -0.136 4.136 22 C -0.104 4.104 23 C -0.162 4.162 24 C -0.193 4.193 25 C -0.124 4.124 26 C -0.145 4.145 27 O -0.354 6.354 28 Si 0.689 3.311 29 H 0.115 0.885 30 H 0.110 0.890 31 H 0.120 0.880 32 H 0.228 0.772 33 H 0.251 0.749 34 H 0.087 0.913 35 H 0.118 0.882 36 H 0.161 0.839 37 H 0.158 0.842 38 H 0.173 0.827 39 H 0.168 0.832 40 H 0.122 0.878 41 H 0.107 0.893 42 H 0.148 0.852 43 H 0.132 0.868 44 H 0.246 0.754 45 H -0.227 1.227 46 H -0.213 1.213 Dipole moment (debyes) X Y Z Total from point charges -4.046 0.111 -0.534 4.082 hybrid contribution -0.402 0.711 0.472 0.944 sum -4.448 0.822 -0.062 4.524 Atomic orbital electron populations 1.22495 0.74122 1.05748 1.05458 1.43718 1.08170 1.04361 1.53269 1.22412 0.88760 0.93299 1.01547 1.20274 0.92426 0.93529 1.20856 1.17681 0.87736 0.82206 0.74297 1.90752 1.27922 1.76210 1.52939 1.45324 1.09945 1.04491 1.75106 1.21870 0.89254 0.90345 0.97679 0.89957 1.23597 1.01112 0.95954 0.97289 1.21611 1.00804 0.89088 0.96744 0.86717 1.19820 0.93235 0.95371 0.98839 1.21003 1.01282 0.90815 0.96245 1.20003 0.94233 0.94649 1.10706 1.18504 0.80251 0.81491 0.74490 1.93221 1.91281 1.81030 1.50966 1.93182 1.55695 1.83687 1.83667 1.93183 1.83055 1.70921 1.69247 1.21178 0.91161 1.01206 0.96908 1.21452 1.00992 0.92624 0.98528 1.21574 0.95620 0.97200 0.96006 1.23394 1.03693 0.93196 0.95909 1.21729 0.95445 0.93930 1.08162 1.20777 0.90074 0.89978 1.11578 1.24646 0.93786 0.94073 1.01978 1.86456 1.28821 1.89526 1.30585 0.93259 0.73580 0.75401 0.88848 0.88497 0.89015 0.88019 0.77200 0.74901 0.91296 0.88196 0.83878 0.84209 0.82739 0.83199 0.87815 0.89325 0.85183 0.86815 0.75378 1.22650 1.21266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.65 9.81 127.77 1.25 0.60 16 2 N -0.42 1.87 3.09 -533.26 -1.65 0.22 16 3 C 0.08 -0.36 10.83 83.92 0.91 0.55 16 4 C -0.26 -0.96 6.29 -19.04 -0.12 -1.08 16 5 C 0.59 4.13 7.81 86.61 0.68 4.81 16 6 O -0.60 -10.25 16.57 -4.09 -0.07 -10.32 16 7 N -0.70 1.31 5.25 -443.17 -2.33 -1.02 16 8 C 0.11 -0.23 4.33 45.58 0.20 -0.04 16 9 H 0.08 0.28 7.46 -2.39 -0.02 0.26 16 10 C -0.14 0.59 7.27 31.18 0.23 0.82 16 11 C -0.06 0.46 3.85 -11.01 -0.04 0.42 16 12 H 0.11 -1.13 8.09 -2.38 -0.02 -1.15 16 13 C -0.07 0.31 5.29 -19.86 -0.11 0.20 16 14 C -0.08 0.14 9.06 22.27 0.20 0.35 16 15 C -0.19 -0.15 5.45 -19.87 -0.11 -0.26 16 16 C 0.51 1.65 3.37 71.24 0.24 1.89 16 17 F -0.18 -0.93 17.30 44.97 0.78 -0.15 16 18 F -0.18 -0.71 16.46 44.97 0.74 0.03 16 19 F -0.18 -0.87 16.46 44.97 0.74 -0.13 16 20 C -0.09 0.10 9.40 22.27 0.21 0.31 16 21 C -0.12 0.48 10.05 22.27 0.22 0.71 16 22 C -0.09 0.42 8.54 22.27 0.19 0.61 16 23 C -0.12 0.88 7.29 31.12 0.23 1.10 16 24 C -0.17 -0.97 9.49 23.62 0.22 -0.74 16 25 C -0.01 0.00 6.14 40.98 0.25 0.25 16 26 C -0.03 0.08 2.87 71.24 0.20 0.28 16 27 O -0.55 2.87 10.32 -148.98 -1.54 1.33 16 28 Si 0.78 -0.72 31.28 68.60 2.15 1.43 16 29 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 30 H 0.09 -0.74 6.73 -2.39 -0.02 -0.76 16 31 H 0.10 -1.44 8.13 -2.39 -0.02 -1.46 16 32 H 0.21 -2.91 7.45 -2.91 -0.02 -2.93 16 33 H 0.41 -3.76 7.64 -92.71 -0.71 -4.47 16 34 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.10 -0.52 6.40 -2.39 -0.02 -0.53 16 36 H 0.14 -0.64 7.60 -2.91 -0.02 -0.66 16 37 H 0.14 -0.40 7.60 -2.91 -0.02 -0.42 16 38 H 0.15 -1.29 8.06 -2.91 -0.02 -1.31 16 39 H 0.15 -1.27 6.73 -2.91 -0.02 -1.29 16 40 H 0.10 -0.79 7.64 -2.39 -0.02 -0.80 16 41 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 42 H 0.13 1.19 6.66 -2.91 -0.02 1.17 16 43 H 0.11 -0.14 7.96 -2.39 -0.02 -0.16 16 44 H 0.40 -4.91 8.70 -74.06 -0.64 -5.56 16 45 H -0.30 -2.08 6.77 99.48 0.67 -1.40 16 46 H -0.29 -1.31 7.11 99.48 0.71 -0.61 16 Total: 0.00 -25.60 395.00 3.40 -22.19 By element: Atomic # 1 Polarization: -24.08 SS G_CDS: -0.28 Total: -24.37 kcal Atomic # 6 Polarization: 5.92 SS G_CDS: 4.86 Total: 10.78 kcal Atomic # 7 Polarization: 3.17 SS G_CDS: -3.97 Total: -0.80 kcal Atomic # 8 Polarization: -7.38 SS G_CDS: -1.60 Total: -8.99 kcal Atomic # 9 Polarization: -2.50 SS G_CDS: 2.26 Total: -0.24 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 2.15 Total: 1.43 kcal Total: -25.60 3.40 -22.19 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.507 kcal (2) G-P(sol) polarization free energy of solvation -25.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds