Wall clock time and date at job start Mon Mar 8 2021 02:20:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47100 * 2 1 4 4 C 1.50703 * 109.47166 * 119.99658 * 2 1 3 5 5 C 1.32692 * 124.68347 * 65.00087 * 4 2 1 6 6 C 1.44506 * 113.10079 * 179.97438 * 5 4 2 7 7 C 1.47043 * 123.49184 * 179.97438 * 6 5 4 8 8 O 1.21656 * 119.99670 * 180.02562 * 7 6 5 9 9 N 1.34773 * 120.00291 * 0.02562 * 7 6 5 10 10 C 1.46500 * 119.99937 * 179.97438 * 9 7 6 11 11 H 1.08991 * 112.90919 * 336.25380 * 10 9 7 12 12 C 1.53787 * 113.61270 * 107.50461 * 10 9 7 13 13 C 1.53786 * 87.08144 * 89.11168 * 12 10 9 14 14 H 1.08993 * 113.69033 * 270.87110 * 13 12 10 15 15 C 1.50696 * 113.61135 * 139.98015 * 13 12 10 16 16 C 1.38212 * 120.00198 * 322.53037 * 15 13 12 17 17 C 1.38255 * 120.00284 * 179.97438 * 16 15 13 18 18 C 1.38217 * 119.99740 * 0.02562 * 17 16 15 19 19 C 1.38256 * 120.00087 * 359.94716 * 18 17 16 20 20 C 1.50702 * 119.99963 * 180.32327 * 19 18 17 21 21 F 1.39897 * 109.47350 * 269.72901 * 20 19 18 22 22 F 1.39900 * 109.46783 * 29.73146 * 20 19 18 23 23 F 1.39898 * 109.46659 * 149.72683 * 20 19 18 24 24 C 1.38215 * 119.99734 * 0.05278 * 19 18 17 25 25 C 1.53779 * 113.61514 * 204.99655 * 10 9 7 26 26 C 1.36223 * 113.01395 * 0.23447 * 6 5 4 27 27 Cl 1.73598 * 124.60539 * 179.76819 * 26 6 5 28 28 S 1.70449 * 110.78858 * 359.64353 * 26 6 5 29 29 H 0.96704 * 113.99763 * 300.00401 * 1 2 3 30 30 H 1.09001 * 109.47124 * 240.00047 * 2 1 3 31 31 H 1.48501 * 109.99800 * 299.99875 * 3 2 1 32 32 H 1.48499 * 110.00111 * 61.31872 * 3 2 1 33 33 H 1.08001 * 123.45050 * 359.97438 * 5 4 2 34 34 H 0.96996 * 119.99663 * 359.97438 * 9 7 6 35 35 H 1.09002 * 113.61254 * 334.56764 * 12 10 9 36 36 H 1.08993 * 113.61797 * 203.66400 * 12 10 9 37 37 H 1.08000 * 119.99961 * 359.97438 * 16 15 13 38 38 H 1.07997 * 120.00435 * 180.02562 * 17 16 15 39 39 H 1.08001 * 119.99701 * 179.97438 * 18 17 16 40 40 H 1.08000 * 119.99306 * 179.97438 * 24 19 18 41 41 H 1.08996 * 113.61528 * 156.33659 * 25 10 9 42 42 H 1.09004 * 113.61234 * 25.43504 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.7483 -1.9996 1.4858 6 6 2.3363 -2.4188 2.7375 7 6 2.2693 -3.7976 3.2439 8 8 2.7870 -4.0806 4.3078 9 7 1.6343 -4.7478 2.5296 10 6 1.5680 -6.1216 3.0340 11 1 2.3701 -6.3558 3.7338 12 6 0.1727 -6.5260 3.5385 13 6 -0.1285 -6.9824 2.1012 14 1 -0.5431 -6.1966 1.4699 15 6 -0.9129 -8.2671 2.0277 16 6 -0.6641 -9.2815 2.9329 17 6 -1.3841 -10.4598 2.8658 18 6 -2.3524 -10.6236 1.8932 19 6 -2.6016 -9.6087 0.9880 20 6 -3.6624 -9.7845 -0.0679 21 9 -3.0898 -10.3426 -1.2158 22 9 -4.6638 -10.6342 0.4141 23 9 -4.2183 -8.5397 -0.3820 24 6 -1.8818 -8.4307 1.0551 25 6 1.3874 -7.1756 1.9288 26 6 2.9543 -1.4030 3.4022 27 17 3.7530 -1.5695 4.9346 28 16 2.8398 0.0530 2.5235 29 1 -0.3933 0.4418 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5879 2.4586 1.2242 33 1 1.2146 -2.6672 0.8257 34 1 1.2212 -4.5220 1.6815 35 1 -0.4351 -5.6820 3.8649 36 1 0.1891 -7.3416 4.2613 37 1 0.0928 -9.1536 3.6926 38 1 -1.1900 -11.2523 3.5734 39 1 -2.9145 -11.5443 1.8405 40 1 -2.0763 -7.6381 0.3478 41 1 1.7360 -8.1689 2.2115 42 1 1.7603 -6.8561 0.9556 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:20:38 Heat of formation + Delta-G solvation = -125.255566 kcal Electronic energy + Delta-G solvation = -33883.233720 eV Core-core repulsion = 28533.695766 eV Total energy + Delta-G solvation = -5349.537954 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.040 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -51.23717 -48.76209 -48.71131 -41.71434 -40.68693 -39.30771 -38.68001 -37.95051 -37.02198 -34.66864 -32.84381 -32.13524 -31.59141 -27.23494 -27.09398 -26.69997 -26.63438 -25.24033 -23.43806 -22.56033 -22.27714 -20.86983 -20.39471 -19.57077 -19.46932 -19.40479 -18.97131 -18.00128 -17.80531 -17.33377 -17.02506 -16.52736 -16.43592 -16.16656 -15.86931 -15.82150 -15.76279 -15.58108 -15.45981 -15.17450 -14.99951 -14.87489 -14.84714 -14.77094 -14.53441 -14.42439 -14.32959 -14.18219 -13.93427 -13.75147 -13.41342 -13.21583 -12.98160 -12.88357 -12.60723 -12.48693 -12.40478 -12.12779 -11.86229 -11.80240 -11.75439 -11.25358 -10.99616 -10.72757 -10.23115 -10.15617 -9.88899 -9.79937 -9.65682 -5.03819 -0.63018 -0.18711 -0.09024 0.22758 0.48442 0.72163 1.04760 1.19084 1.52928 1.60709 1.90497 2.11737 2.16093 2.42828 2.67261 2.95202 3.24879 3.34673 3.44630 3.47869 3.64565 3.70188 3.82526 3.85056 3.89261 3.95771 4.07351 4.10196 4.24165 4.38064 4.39073 4.53797 4.64595 4.66776 4.78252 4.78782 4.86953 4.90222 4.95938 4.97919 5.03716 5.13766 5.17749 5.31682 5.44026 5.62223 5.77972 6.41508 6.44970 7.14203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.027 4.027 3 Si 0.701 3.299 4 C -0.225 4.225 5 C -0.067 4.067 6 C -0.166 4.166 7 C 0.573 3.427 8 O -0.558 6.558 9 N -0.693 5.693 10 C 0.116 3.884 11 H 0.090 0.910 12 C -0.141 4.141 13 C -0.068 4.068 14 H 0.111 0.889 15 C -0.073 4.073 16 C -0.086 4.086 17 C -0.118 4.118 18 C -0.086 4.086 19 C -0.194 4.194 20 C 0.506 3.494 21 F -0.183 7.183 22 F -0.182 7.182 23 F -0.182 7.182 24 C -0.077 4.077 25 C -0.123 4.123 26 C -0.139 4.139 27 Cl 0.003 6.997 28 S 0.261 5.739 29 H 0.389 0.611 30 H 0.151 0.849 31 H -0.270 1.270 32 H -0.258 1.258 33 H 0.181 0.819 34 H 0.414 0.586 35 H 0.066 0.934 36 H 0.103 0.897 37 H 0.152 0.848 38 H 0.156 0.844 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.106 0.894 42 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.418 1.447 -2.312 3.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.140 4.140 3 Si 0.603 3.397 4 C -0.342 4.342 5 C -0.095 4.095 6 C -0.186 4.186 7 C 0.360 3.640 8 O -0.437 6.437 9 N -0.344 5.344 10 C 0.011 3.989 11 H 0.109 0.891 12 C -0.180 4.180 13 C -0.086 4.086 14 H 0.129 0.871 15 C -0.073 4.073 16 C -0.103 4.103 17 C -0.135 4.135 18 C -0.105 4.105 19 C -0.196 4.196 20 C 0.452 3.548 21 F -0.165 7.165 22 F -0.164 7.164 23 F -0.163 7.163 24 C -0.095 4.095 25 C -0.161 4.161 26 C -0.286 4.286 27 Cl 0.032 6.968 28 S 0.526 5.474 29 H 0.239 0.761 30 H 0.168 0.832 31 H -0.195 1.195 32 H -0.184 1.184 33 H 0.198 0.802 34 H 0.252 0.748 35 H 0.085 0.915 36 H 0.121 0.879 37 H 0.170 0.830 38 H 0.174 0.826 39 H 0.158 0.842 40 H 0.159 0.841 41 H 0.125 0.875 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 3.218 3.226 -1.740 4.878 hybrid contribution -2.035 -1.602 0.022 2.590 sum 1.183 1.625 -1.718 2.644 Atomic orbital electron populations 1.86629 1.17404 1.80104 1.50211 1.24471 0.83567 1.09834 0.96118 0.94521 0.90932 0.74022 0.80178 1.24859 1.08251 0.98567 1.02564 1.21148 0.98842 0.95465 0.94073 1.20328 1.06428 0.94074 0.97750 1.17653 0.78020 0.84505 0.83855 1.90862 1.47348 1.82285 1.23226 1.45385 1.56219 1.08193 1.24653 1.21867 0.98491 0.80866 0.97703 0.89138 1.23581 0.96207 1.01815 0.96386 1.21628 0.94696 0.94015 0.98242 0.87079 1.19805 0.96003 0.96543 0.94912 1.21580 0.98598 0.92259 0.97885 1.21462 0.95042 0.98781 0.98241 1.21184 0.97636 0.98025 0.93609 1.20003 1.00746 0.99480 0.99349 1.18515 0.81387 0.73524 0.81359 1.93219 1.84560 1.85622 1.53071 1.93184 1.63634 1.71626 1.87934 1.93183 1.86795 1.42590 1.93740 1.20998 0.94273 0.95716 0.98497 1.23398 0.93925 0.99437 0.99338 1.25803 1.04772 1.02089 0.95889 1.98428 1.76651 1.97509 1.24227 1.83362 1.49849 1.04864 1.09301 0.76082 0.83180 1.19548 1.18356 0.80161 0.74824 0.91528 0.87886 0.83008 0.82637 0.84185 0.84111 0.87534 0.89292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.45 12.88 -148.98 -1.92 0.53 16 2 C -0.03 0.20 2.94 71.24 0.21 0.41 16 3 Si 0.70 -4.26 30.92 68.60 2.12 -2.14 16 4 C -0.22 1.27 5.65 24.52 0.14 1.41 16 5 C -0.07 0.34 9.75 22.70 0.22 0.56 16 6 C -0.17 -0.19 5.98 -19.84 -0.12 -0.31 16 7 C 0.57 2.29 7.79 86.55 0.67 2.97 16 8 O -0.56 -6.67 14.51 -4.21 -0.06 -6.73 16 9 N -0.69 2.21 5.24 -443.66 -2.33 -0.11 16 10 C 0.12 -0.43 4.32 45.52 0.20 -0.23 16 11 H 0.09 0.06 7.46 -2.39 -0.02 0.04 16 12 C -0.14 0.70 7.25 31.12 0.23 0.92 16 13 C -0.07 0.48 3.86 -11.01 -0.04 0.44 16 14 H 0.11 -1.00 8.09 -2.39 -0.02 -1.02 16 15 C -0.07 0.30 5.29 -19.87 -0.11 0.19 16 16 C -0.09 0.44 8.61 22.27 0.19 0.63 16 17 C -0.12 0.50 10.05 22.27 0.22 0.72 16 18 C -0.09 0.09 9.40 22.27 0.21 0.29 16 19 C -0.19 -0.23 5.45 -19.86 -0.11 -0.34 16 20 C 0.51 1.95 3.37 71.24 0.24 2.19 16 21 F -0.18 -1.02 17.30 44.97 0.78 -0.24 16 22 F -0.18 -0.95 16.46 44.97 0.74 -0.21 16 23 F -0.18 -0.87 16.47 44.97 0.74 -0.13 16 24 C -0.08 0.10 9.06 22.27 0.20 0.30 16 25 C -0.12 0.97 7.29 31.12 0.23 1.19 16 26 C -0.14 -0.39 6.87 67.35 0.46 0.07 16 27 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.05 16 28 S 0.26 -0.81 20.19 -56.49 -1.14 -1.95 16 29 H 0.39 -3.66 8.70 -74.05 -0.64 -4.30 16 30 H 0.15 -1.59 7.96 -2.39 -0.02 -1.61 16 31 H -0.27 -0.22 7.11 99.48 0.71 0.49 16 32 H -0.26 0.62 7.11 99.48 0.71 1.32 16 33 H 0.18 -1.90 7.10 -2.91 -0.02 -1.92 16 34 H 0.41 -3.71 7.24 -92.71 -0.67 -4.38 16 35 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.10 -0.64 6.31 -2.39 -0.02 -0.66 16 37 H 0.15 -1.39 6.66 -2.91 -0.02 -1.41 16 38 H 0.16 -1.34 8.06 -2.91 -0.02 -1.36 16 39 H 0.14 -0.38 7.60 -2.91 -0.02 -0.40 16 40 H 0.14 -0.48 7.60 -2.91 -0.02 -0.50 16 41 H 0.11 -0.92 7.72 -2.39 -0.02 -0.93 16 42 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 Total: 0.00 -19.02 395.10 1.77 -17.25 By element: Atomic # 1 Polarization: -17.50 SS G_CDS: -0.14 Total: -17.64 kcal Atomic # 6 Polarization: 8.39 SS G_CDS: 3.05 Total: 11.44 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -2.33 Total: -0.11 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.98 Total: -6.20 kcal Atomic # 9 Polarization: -2.84 SS G_CDS: 2.26 Total: -0.58 kcal Atomic # 14 Polarization: -4.26 SS G_CDS: 2.12 Total: -2.14 kcal Atomic # 16 Polarization: -0.81 SS G_CDS: -1.14 Total: -1.95 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.05 kcal Total: -19.02 1.77 -17.25 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.005 kcal (2) G-P(sol) polarization free energy of solvation -19.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.250 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds